Jatropha Genome Database
- JcCB0061481.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0061481.10 - phase: 2 /partial
(117 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9SGJ3_RICCO (tr|B9SGJ3) DNA-directed RNA polymerase, putative O... 169 7e-41
B9HEU3_POPTR (tr|B9HEU3) Predicted protein OS=Populus trichocarp... 147 5e-34
D7SPH0_VITVI (tr|D7SPH0) Whole genome shotgun sequence of line P... 128 2e-28
D7MNU0_ARALY (tr|D7MNU0) Putative uncharacterized protein OS=Ara... 123 8e-27
A9XLE9_PETIN (tr|A9XLE9) Putative uncharacterized protein OS=Pet... 117 3e-25
Q9FGZ3_ARATH (tr|Q9FGZ3) Similarity to unknown protein OS=Arabid... 117 6e-25
A9XLD0_SOLME (tr|A9XLD0) Putative uncharacterized protein OS=Sol... 110 6e-23
A9XLG5_SOLBU (tr|A9XLG5) Putative uncharacterized protein OS=Sol... 108 2e-22
Q9FYW6_SOLLC (tr|Q9FYW6) BAC19.10 OS=Solanum lycopersicum PE=4 SV=1 105 1e-21
A9XLE5_CAPFR (tr|A9XLE5) Putative uncharacterized protein OS=Cap... 102 9e-21
A2YT86_ORYSI (tr|A2YT86) Putative uncharacterized protein OS=Ory... 58 3e-07
A3BRD0_ORYSJ (tr|A3BRD0) Putative uncharacterized protein OS=Ory... 58 3e-07
>B9SGJ3_RICCO (tr|B9SGJ3) DNA-directed RNA polymerase, putative OS=Ricinus
communis GN=RCOM_0553410 PE=4 SV=1
Length = 677
Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/111 (80%), Positives = 98/111 (88%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKLAADGADAPLEELQEIISEVATNIHGSYVLKSS 60
F+LI QGLRDLAVSQSTLPKADPRIA AA GADAP EELQEIIS+VATNIHG YVLKSS
Sbjct: 551 FQLICQGLRDLAVSQSTLPKADPRIAVAAASGADAPPEELQEIISQVATNIHGFYVLKSS 610
Query: 61 PDHPQYDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
P+HPQYD LRKV+IDLLLARGPNAKLKK+EV+EAA+L KRD+ EY K+
Sbjct: 611 PEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKRDVTNIEYNKL 661
>B9HEU3_POPTR (tr|B9HEU3) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_870360 PE=4 SV=1
Length = 667
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/112 (72%), Positives = 93/112 (83%), Gaps = 1/112 (0%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKLAADGADAPLEELQEIISEVATNIHGSYVLKSS 60
F++I QGLR LA+SQSTLPKADPRIA AA GA+AP EELQE+ISEVATNIHG YVLKSS
Sbjct: 534 FQMICQGLRQLAISQSTLPKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSS 593
Query: 61 PDHPQYDVL-RKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
P+HP +D L RKVVI L LARGPNA +KKSEV AA+L LKR+ + +EY KV
Sbjct: 594 PEHPDFDPLSRKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKV 645
>D7SPH0_VITVI (tr|D7SPH0) Whole genome shotgun sequence of line PN40024,
scaffold_23.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00018995001 PE=4 SV=1
Length = 688
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKLAADGADAPLEELQEIISEVATNIHGSYVLKSS 60
F+LI Q LRDLAVS+ST PK DPR AA GADAP EEL IIS+ AT +HG YV K+S
Sbjct: 557 FQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS 616
Query: 61 PDHPQYDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
+H +++ LRKVV+DL + PNAKLK++++ EAAK+ LK++I T EY KV
Sbjct: 617 -EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKV 666
>D7MNU0_ARALY (tr|D7MNU0) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_495012 PE=4 SV=1
Length = 676
Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 75/111 (67%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKLAADGADAPLEELQEIISEVATNIHGSYVLKSS 60
+E I QGLRDLAVS S PKAD +A A DA +EL+++ISEVA NIHGSYV SS
Sbjct: 548 YETICQGLRDLAVSTSNNPKADSGMAVNVALAVDAYQDELKDVISEVAANIHGSYVSISS 607
Query: 61 PDHPQYDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
PDHP+YD LR VVI L GP AKL K+EV+ A + L R+I EY KV
Sbjct: 608 PDHPEYDSLRGVVISLFCGTGPGAKLMKAEVFAAGRNELNREITNNEYIKV 658
>A9XLE9_PETIN (tr|A9XLE9) Putative uncharacterized protein OS=Petunia
integrifolia subsp. inflata GN=10.PETUNIA.3 PE=4 SV=1
Length = 666
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKLAADGAD-APLEELQEIISEVATNIHGSYVLKS 59
F+ IR LR+ AVS++ PK + + A AA D AP EELQ +I +VA NIHG YVLKS
Sbjct: 548 FQQIRLRLREAAVSENDRPKGNAKGAVAAASFVDDAPPEELQAVIDQVAFNIHGDYVLKS 607
Query: 60 SPDHPQYDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
SPD+PQYD LRKVV++LL+ GP+AKLKK+ + +AAK L RDI E+ KV
Sbjct: 608 SPDNPQYDALRKVVVELLIGEGPSAKLKKATIMKAAKSELNRDIPPAEFQKV 659
>Q9FGZ3_ARATH (tr|Q9FGZ3) Similarity to unknown protein OS=Arabidopsis thaliana
GN=At5g49530 PE=4 SV=1
Length = 689
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 75/111 (67%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKLAADGADAPLEELQEIISEVATNIHGSYVLKSS 60
+E I QGLRDLAVS S PKAD +A A DA EL+++I+ VATNIHGSYV SS
Sbjct: 561 YETICQGLRDLAVSTSNNPKADSGMAVNVALAVDAYQGELEDVINGVATNIHGSYVSISS 620
Query: 61 PDHPQYDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
PDHP+YD LR+VVI LL P KL K+EV+ A + L+R+I EY KV
Sbjct: 621 PDHPEYDSLREVVISLLTGSPPGTKLMKAEVFAAGRTKLEREITNNEYIKV 671
>A9XLD0_SOLME (tr|A9XLD0) Putative uncharacterized protein OS=Solanum melongena
GN=10.EGGPLANT.4 PE=4 SV=1
Length = 664
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 20 KADPRIAKLAADG-ADAPLEELQEIISEVATNIHGSYVLKSSPDHPQYDVLRKVVIDLLL 78
K D + A G +DAP EE++ +++ +A NIHG Y+L+SSPD+PQYD LRKVVIDL +
Sbjct: 562 KGDSKKAVTGTTGVSDAPKEEIEAVVNRIAVNIHGVYILRSSPDNPQYDALRKVVIDLFM 621
Query: 79 ARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKVSDTEL 116
A GP+AKLKK+ + EAAKL L RD+ + E+ KVS + L
Sbjct: 622 AEGPSAKLKKASIIEAAKLQLGRDVTSVEFQKVSTSFL 659
>A9XLG5_SOLBU (tr|A9XLG5) Putative uncharacterized protein OS=Solanum
bulbocastanum GN=10.POTATO.9 PE=4 SV=1
Length = 654
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 20 KADPRIAKLAADG-ADAPLEELQEIISEVATNIHGSYVLKSSPDHPQYDVLRKVVIDLLL 78
K DP+ A +A G +DA +E++ +++++A NIHG YVLKSSPD+PQYD LRKVVIDL +
Sbjct: 552 KEDPKKAIIAPTGVSDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFM 611
Query: 79 ARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKVS 112
A G +AKLKK+ + EAAKL L RD+ T E+ KVS
Sbjct: 612 AEGSSAKLKKASIVEAAKLQLGRDVTTVEFQKVS 645
>Q9FYW6_SOLLC (tr|Q9FYW6) BAC19.10 OS=Solanum lycopersicum PE=4 SV=1
Length = 683
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Query: 18 LPKADPRIAKLAADG-ADAPLEELQEIISEVATNIHGSYVLKSSPDHPQYDVLRKVVIDL 76
+ K DP A ++ G +DA +E++ +++++A NIHG YVLKSSPD+PQYD LRKVVIDL
Sbjct: 533 MEKEDPMKAIISPAGISDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDL 592
Query: 77 LLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
+A G NAKLKK+ + EAAKL L RD+ T E+ K+
Sbjct: 593 FMAEGSNAKLKKASIVEAAKLQLGRDVTTVEFQKL 627
>A9XLE5_CAPFR (tr|A9XLE5) Putative uncharacterized protein OS=Capsicum frutescens
GN=10.PEPPER.9 PE=4 SV=1
Length = 629
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 20 KADPRIAKLAADGADAPLEELQEIISEVATNIHGSYVLKSSPDHPQYDVLRKVVIDLLLA 79
K P+ A A G D P EE Q +I +VA NIHG VLKSSPD+PQYD RKVVIDL +A
Sbjct: 529 KGAPKKATTEAVG-DPPPEEKQAVIDQVAVNIHGVNVLKSSPDNPQYDAFRKVVIDLFMA 587
Query: 80 RGPNAKLKKSEVYEAAKLVLKRDINTTEYTKVSDTEL 116
+GP+AKLKK+ + AA L L RD+ E+ KVS + L
Sbjct: 588 KGPSAKLKKASILAAANLQLGRDVTIVEFQKVSSSFL 624
>A2YT86_ORYSI (tr|A2YT86) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_28532 PE=4 SV=1
Length = 673
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKL---AADGADAPLEELQEIISEVATNIHGSYVL 57
+ IR+ LR LA ++ K P++ L A + A PL +LQ+ +++VA +HG YV
Sbjct: 549 IQAIRRDLRQLAAKYASDRKDGPKLQALSNAATNCASFPLVDLQKSLNQVAVPVHGVYVA 608
Query: 58 K-SSPDHPQYDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
K + P+ P R ++I L + P++KL K E+ + A LK+ +N +Y +V
Sbjct: 609 KPAKPNSP-----RNILIKLFRDKDPDSKLTKQEILDCAANHLKKGLNEKDYHQV 658
>A3BRD0_ORYSJ (tr|A3BRD0) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_26678 PE=4 SV=1
Length = 673
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 1 FELIRQGLRDLAVSQSTLPKADPRIAKL---AADGADAPLEELQEIISEVATNIHGSYVL 57
+ IR+ LR LA ++ K P++ L A + A PL +LQ+ +++VA +HG YV
Sbjct: 549 IQAIRRDLRQLAAKYASDRKDGPKLQALSNAATNCASFPLVDLQKSLNQVAVPVHGVYVA 608
Query: 58 K-SSPDHPQYDVLRKVVIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKV 111
K + P+ P R ++I L + P++KL K E+ + A LK+ +N +Y +V
Sbjct: 609 KPAKPNSP-----RNILIKLFRDKDPDSKLTKQEILDCAANHLKKGLNEKDYHQV 658