Jatropha Genome Database

JcCB0060791.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0060791.20 - phase: 2 /pseudo/partial
         (94 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S766_RICCO (tr|B9S766) Putative uncharacterized protein OS=Ric...   138   2e-31
D7TPP5_VITVI (tr|D7TPP5) Whole genome shotgun sequence of line P...   118   3e-25
D7KEY0_ARALY (tr|D7KEY0) EMB1273 OS=Arabidopsis lyrata subsp. ly...   111   2e-23
Q9XIB8_ARATH (tr|Q9XIB8) At1g49510 OS=Arabidopsis thaliana GN=At...   108   2e-22
C6TBN1_SOYBN (tr|C6TBN1) Putative uncharacterized protein OS=Gly...    99   1e-19
B9N4U6_POPTR (tr|B9N4U6) Predicted protein OS=Populus trichocarp...    96   9e-19
B8LMR1_PICSI (tr|B8LMR1) Putative uncharacterized protein OS=Pic...    84   6e-15
A9NNS5_PICSI (tr|A9NNS5) Putative uncharacterized protein OS=Pic...    72   2e-11
A9RHV1_PHYPA (tr|A9RHV1) Predicted protein OS=Physcomitrella pat...    57   9e-07

>B9S766_RICCO (tr|B9S766) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0773990 PE=4 SV=1
          Length = 190

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 73/84 (86%)

Query: 7   IHMHHLMKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWF 66
           + +  L+KDAEVPWHLIAIAIFF+LIKLPGP YPYWGRIF+PH ANGVLWRT+WSAFLW+
Sbjct: 105 LELSPLLKDAEVPWHLIAIAIFFSLIKLPGPYYPYWGRIFIPHFANGVLWRTIWSAFLWY 164

Query: 67  RRPRKGSGAVLQQNSADSSNSETN 90
           R+PRK S ++L+Q+S   SNS TN
Sbjct: 165 RKPRKASQSMLKQDSVIGSNSGTN 188


>D7TPP5_VITVI (tr|D7TPP5) Whole genome shotgun sequence of line PN40024,
           scaffold_63.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00031807001 PE=4 SV=1
          Length = 232

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 3/85 (3%)

Query: 7   IHMHHLMKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWF 66
           + +  ++KDAEV WHLIAIAIFFTL+KLPGP YPYWGRIF+PH ANG L RTLWS FLW+
Sbjct: 150 LELSPVLKDAEVAWHLIAIAIFFTLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSVFLWY 209

Query: 67  RRPRKGSGAVLQQNSADSSNSETNT 91
           RRPR+    +LQ+ S + S S  NT
Sbjct: 210 RRPRE---TLLQRKSLNGSGSVPNT 231


>D7KEY0_ARALY (tr|D7KEY0) EMB1273 OS=Arabidopsis lyrata subsp. lyrata
           GN=ARALYDRAFT_474088 PE=4 SV=1
          Length = 237

 Score =  111 bits (278), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 59/72 (81%)

Query: 13  MKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFRRPRKG 72
           +K+AEVPWHLIA+ +FFTLIKLPGP YPYWGR+FVPH ANGVL+R LWS F W+++ R  
Sbjct: 165 LKEAEVPWHLIAMMMFFTLIKLPGPYYPYWGRLFVPHFANGVLFRALWSMFFWYKKTRNT 224

Query: 73  SGAVLQQNSADS 84
           SG  LQ +S ++
Sbjct: 225 SGNTLQNHSLET 236


>Q9XIB8_ARATH (tr|Q9XIB8) At1g49510 OS=Arabidopsis thaliana GN=At1g49510 PE=2
           SV=1
          Length = 240

 Score =  108 bits (269), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 57/73 (78%)

Query: 13  MKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFRRPRKG 72
           +K+AEVPWHLIA+ +FFTLIKLPGP YPYWGR+ VPH ANGVL R LWS F W+++ R  
Sbjct: 168 LKEAEVPWHLIAMMMFFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNT 227

Query: 73  SGAVLQQNSADSS 85
           SG  LQ +S ++ 
Sbjct: 228 SGNPLQNHSLETE 240


>C6TBN1_SOYBN (tr|C6TBN1) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 245

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 52/66 (78%), Gaps = 4/66 (6%)

Query: 13  MKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFRRPRK- 71
           ++DAE+PWHLIAIAIFFTLIKLPGP YPYW RI +PH ANGVL RTL  A LW RRP+  
Sbjct: 176 LRDAEIPWHLIAIAIFFTLIKLPGPYYPYWVRIIIPHFANGVLLRTLLFAILWHRRPKAL 235

Query: 72  ---GSG 74
              GSG
Sbjct: 236 KILGSG 241


>B9N4U6_POPTR (tr|B9N4U6) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_744215 PE=4 SV=1
          Length = 231

 Score = 96.3 bits (238), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 47/57 (82%)

Query: 7   IHMHHLMKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAF 63
           + +  L+KDAEVPWHLI  AI FTLIKLPGP YPYWGRIF+PH ANGVLWRTL  AF
Sbjct: 174 LELSPLLKDAEVPWHLIVTAIVFTLIKLPGPYYPYWGRIFIPHFANGVLWRTLLFAF 230


>B8LMR1_PICSI (tr|B8LMR1) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 247

 Score = 83.6 bits (205), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 44/65 (67%)

Query: 7   IHMHHLMKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWF 66
           + +   +++   PWHL  I  FF LIK PGP YPYWGRIF+PH ANG LWRTLW A +W+
Sbjct: 170 VELSENLQEGGFPWHLAIIGAFFALIKFPGPYYPYWGRIFLPHFANGGLWRTLWFAHIWY 229

Query: 67  RRPRK 71
           +   K
Sbjct: 230 KSQFK 234


>A9NNS5_PICSI (tr|A9NNS5) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 259

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 7   IHMHHLMKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWF 66
           + +   +K+   PWHL+A+A+ F+LIK  GP YPYWG I +PH ANG LW+T+W    W 
Sbjct: 173 LELSQNLKEGGFPWHLLAMALIFSLIKFLGPFYPYWGGILLPHFANGGLWQTIWLTRNWH 232

Query: 67  RRPRKGSGAVLQ-QNSADSSNSETNTL 92
           +   + +      +N+   S+ +T  L
Sbjct: 233 KNQSQTTEVERNGENTISESDLKTGYL 259


>A9RHV1_PHYPA (tr|A9RHV1) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_66428 PE=4 SV=1
          Length = 244

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 11  HLMKDAEV---PWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFR 67
            L  D EV   PWHL+A+   F  +K  GP  P WGR+ VPH ANG LW  +     W R
Sbjct: 171 ELAADIEVGQFPWHLVALGFMFGALKFIGPYLPAWGRVSVPHFANGGLWHVIKLVIDWRR 230

Query: 68  R 68
           +
Sbjct: 231 Q 231