Jatropha Genome Database

JcCB0045901.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0045901.10 + phase: 1 /partial/short
         (48 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S580_RICCO (tr|B9S580) Putative uncharacterized protein OS=Ric...    75   2e-12
Q67Y48_ARATH (tr|Q67Y48) At4g28820 OS=Arabidopsis thaliana GN=At...    67   5e-10
Q9SVU9_ARATH (tr|Q9SVU9) Putative uncharacterized protein AT4g28...    67   5e-10
Q2V3D8_ARATH (tr|Q2V3D8) At4g28820 OS=Arabidopsis thaliana GN=At...    67   5e-10
D7U3D4_VITVI (tr|D7U3D4) Whole genome shotgun sequence of line P...    66   1e-09
B9GR93_POPTR (tr|B9GR93) Predicted protein OS=Populus trichocarp...    65   2e-09
D7MD81_ARALY (tr|D7MD81) Zinc finger family protein OS=Arabidops...    65   3e-09
C6T4W0_SOYBN (tr|C6T4W0) Putative uncharacterized protein OS=Gly...    56   1e-06

>B9S580_RICCO (tr|B9S580) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1722410 PE=4 SV=1
          Length = 125

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 43/47 (91%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKV 47
           SSSEI +AL+DESLRKLI +ID A+DP+SELEKAMGVEAF IFTDK+
Sbjct: 58  SSSEICNALKDESLRKLICAIDDASDPDSELEKAMGVEAFCIFTDKI 104


>Q67Y48_ARATH (tr|Q67Y48) At4g28820 OS=Arabidopsis thaliana GN=At4g28820 PE=2
           SV=1
          Length = 172

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 42/48 (87%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKVL 48
           SSSEI+ AL+DE L+KLI SIDS+++P  EL++AMG+EAFR FTDK+L
Sbjct: 115 SSSEIREALKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKIL 162


>Q9SVU9_ARATH (tr|Q9SVU9) Putative uncharacterized protein AT4g28820
           OS=Arabidopsis thaliana GN=F16A16.70 PE=2 SV=1
          Length = 206

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 42/48 (87%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKVL 48
           SSSEI+ AL+DE L+KLI SIDS+++P  EL++AMG+EAFR FTDK+L
Sbjct: 108 SSSEIREALKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKIL 155


>Q2V3D8_ARATH (tr|Q2V3D8) At4g28820 OS=Arabidopsis thaliana GN=At4g28820 PE=2
           SV=1
          Length = 173

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 42/48 (87%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKVL 48
           SSSEI+ AL+DE L+KLI SIDS+++P  EL++AMG+EAFR FTDK+L
Sbjct: 116 SSSEIREALKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKIL 163


>D7U3D4_VITVI (tr|D7U3D4) Whole genome shotgun sequence of line PN40024,
           scaffold_5.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00028519001 PE=4 SV=1
          Length = 132

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKVL 48
           SSSEI+ AL+D+ L++LI  ID + D E+ELEKAMG+EAF IFTDK+L
Sbjct: 80  SSSEIRDALKDQDLQELINKIDQSPDAENELEKAMGIEAFSIFTDKIL 127


>B9GR93_POPTR (tr|B9GR93) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_816955 PE=4 SV=1
          Length = 154

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/48 (68%), Positives = 40/48 (83%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKVL 48
           SSSEI++ L DESL+KLI  ID + DPESEL+ AMGV+ FRIFTDK+L
Sbjct: 102 SSSEIRNDLMDESLQKLIHKIDCSTDPESELDVAMGVDVFRIFTDKIL 149


>D7MD81_ARALY (tr|D7MD81) Zinc finger family protein OS=Arabidopsis lyrata subsp.
           lyrata GN=ARALYDRAFT_328817 PE=4 SV=1
          Length = 173

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 41/48 (85%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKVL 48
           SSSEI+ AL+DE+L+KLI  IDS+++P  EL+ AMG+EAFR FTDK+L
Sbjct: 116 SSSEIREALKDEALQKLIYRIDSSSNPLQELDGAMGIEAFREFTDKIL 163


>C6T4W0_SOYBN (tr|C6T4W0) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 132

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 39/48 (81%)

Query: 1   SSSEIQSALRDESLRKLIRSIDSAADPESELEKAMGVEAFRIFTDKVL 48
           SSSEI+ AL D++L++LI  ID +++ E+EL+KAM  EAFR+ TDK+L
Sbjct: 80  SSSEIRDALNDKALQELICRIDCSSNAENELDKAMAEEAFRLLTDKIL 127