Jatropha Genome Database

JcCB0044401.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044401.20 - phase: 0 /partial
         (61 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S0Z2_RICCO (tr|B9S0Z2) Putative uncharacterized protein OS=Ric...    77   9e-13
B9S0Z3_RICCO (tr|B9S0Z3) Putative uncharacterized protein OS=Ric...    56   1e-06
C6SVN6_SOYBN (tr|C6SVN6) Putative uncharacterized protein OS=Gly...    56   1e-06
D7TK98_VITVI (tr|D7TK98) Whole genome shotgun sequence of line P...    55   2e-06
A5AXS4_VITVI (tr|A5AXS4) Putative uncharacterized protein OS=Vit...    55   2e-06
D7SSZ7_VITVI (tr|D7SSZ7) Whole genome shotgun sequence of line P...    55   4e-06
A5C909_VITVI (tr|A5C909) Putative uncharacterized protein OS=Vit...    54   6e-06
C6T1G4_SOYBN (tr|C6T1G4) Putative uncharacterized protein OS=Gly...    53   1e-05

>B9S0Z2_RICCO (tr|B9S0Z2) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0631620 PE=4 SV=1
          Length = 164

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 2/60 (3%)

Query: 1   MEEKLK-SPVGTPTCSSETASQKLPSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPYNH 59
           ME+K+K S +GTPT  SE  S  LPS LC PS GLSMKRSIQRFLQKR HR  ATSPYN+
Sbjct: 106 MEDKMKTSLLGTPTGRSEFVS-PLPSPLCSPSTGLSMKRSIQRFLQKRKHRAQATSPYNY 164


>B9S0Z3_RICCO (tr|B9S0Z3) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0631830 PE=4 SV=1
          Length = 139

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 29/35 (82%)

Query: 23  LPSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPY 57
           LPS +  P+ GLSMKRS+QRFLQKRNHRI AT PY
Sbjct: 94  LPSPIYSPNNGLSMKRSLQRFLQKRNHRIQATCPY 128


>C6SVN6_SOYBN (tr|C6SVN6) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 150

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 8/63 (12%)

Query: 1   MEEKLKSPVGTPTCSSETASQKL---PSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPY 57
           ME+++ +P G     SE +S  L   P  +  P  GLSMKRS+QRFLQKR +R+  TSPY
Sbjct: 79  MEKRVMTPTG-----SEPSSPILLQSPHNMYSPGTGLSMKRSLQRFLQKRKNRVQETSPY 133

Query: 58  NHE 60
           +HE
Sbjct: 134 HHE 136


>D7TK98_VITVI (tr|D7TK98) Whole genome shotgun sequence of line PN40024,
           scaffold_3.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00021516001 PE=4 SV=1
          Length = 127

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 6/57 (10%)

Query: 1   MEEKLKSPVGTPTCSSETASQKLPSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPY 57
           MEEK ++P       S+  S  L SQL  P+ GLSMKRS+QRFLQKR +R+ ATSPY
Sbjct: 75  MEEKTRTPTA-----SDAISSSLHSQLYSPT-GLSMKRSLQRFLQKRKNRMEATSPY 125


>A5AXS4_VITVI (tr|A5AXS4) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_026095 PE=4 SV=1
          Length = 127

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 6/58 (10%)

Query: 1   MEEKLKSPVGTPTCSSETASQKLPSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPYN 58
           MEEK ++P       S+  S  L SQL  P+ GLSMKRS+QRFLQKR +R+ ATSPY+
Sbjct: 75  MEEKTRTPTA-----SDAISSSLHSQLYSPT-GLSMKRSLQRFLQKRKNRMEATSPYH 126


>D7SSZ7_VITVI (tr|D7SSZ7) Whole genome shotgun sequence of line PN40024,
          scaffold_501.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00007188001 PE=4 SV=1
          Length = 98

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 6/58 (10%)

Query: 1  MEEKLKSPVGTPTCSSETASQKLPSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPYN 58
          MEEK ++P      +S+  S  L SQ+  P+ GLSMKRS+QRFLQKR +R+ ATSPY+
Sbjct: 46 MEEKTRTPT-----ASDAISPSLHSQIYSPT-GLSMKRSLQRFLQKRKNRMEATSPYH 97


>A5C909_VITVI (tr|A5C909) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_007759 PE=4 SV=1
          Length = 121

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 11  TPTCSSET-ASQKLPSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPYNH 59
           TPT S  T  S  L SQL  P+ GLSMKRS++ FLQKR +RI ATSPY H
Sbjct: 73  TPTASDVTMVSPSLQSQLYSPT-GLSMKRSLRSFLQKRKNRIEATSPYGH 121


>C6T1G4_SOYBN (tr|C6T1G4) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 138

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 1   MEEKLKSPVGTPTCSSETASQKLPSQLCRPSAGLSMKRSIQRFLQKRNHRIHATSPYNH 59
           +EE++++P G+   S   A  +  +QL  P  GLSM++S+QRFLQKR +R+   SPY+H
Sbjct: 82  LEERVRTPTGSEPSSP--AVMQSNNQLYSPGTGLSMRKSLQRFLQKRKNRVQEASPYHH 138