Jatropha Genome Database

JcCB0034671.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0034671.10 + phase: 0 
         (86 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SG11_RICCO (tr|B9SG11) Putative uncharacterized protein OS=Ric...    98   4e-19
B9HH33_POPTR (tr|B9HH33) Predicted protein OS=Populus trichocarp...    75   3e-12
D7TTE3_VITVI (tr|D7TTE3) Whole genome shotgun sequence of line P...    68   3e-10
A5AV37_VITVI (tr|A5AV37) Putative uncharacterized protein OS=Vit...    67   5e-10
B9IHA0_POPTR (tr|B9IHA0) ABC transporter family protein OS=Popul...    66   1e-09
B9HH32_POPTR (tr|B9HH32) Predicted protein OS=Populus trichocarp...    62   3e-08
D7SVD1_VITVI (tr|D7SVD1) Whole genome shotgun sequence of line P...    61   5e-08
B9H6K5_POPTR (tr|B9H6K5) Predicted protein OS=Populus trichocarp...    60   6e-08
A5AUC9_VITVI (tr|A5AUC9) Putative uncharacterized protein OS=Vit...    60   1e-07
B9HCF0_POPTR (tr|B9HCF0) Predicted protein OS=Populus trichocarp...    59   1e-07
C6T2U6_SOYBN (tr|C6T2U6) Putative uncharacterized protein OS=Gly...    59   2e-07
C6TFH4_SOYBN (tr|C6TFH4) Putative uncharacterized protein OS=Gly...    57   5e-07

>B9SG11_RICCO (tr|B9SG11) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1153880 PE=4 SV=1
          Length = 85

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 56/67 (83%), Gaps = 2/67 (2%)

Query: 21 GSKTQARPLNTLESHG-PRVRDKGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDG 79
          GS T+ARPLN LE H  PR+ DKGFFDGL +GAIKQSGPSPG GN+ TDSR FGGI KDG
Sbjct: 20 GSTTEARPLNILEPHHRPRMMDKGFFDGLSIGAIKQSGPSPGAGNKYTDSRGFGGI-KDG 78

Query: 80 PSPGQGH 86
          PSPGQGH
Sbjct: 79 PSPGQGH 85


>B9HH33_POPTR (tr|B9HH33) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_562914 PE=4 SV=1
          Length = 84

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 21 GSKTQARPLNTLESHGPRVRDKGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDGP 80
          GS TQARP N L+S   R+   GFFDGL LGAIK+SGPSPG GN+  DS  +GGIN  GP
Sbjct: 20 GSLTQARPFNILKSDRGRIGGTGFFDGLSLGAIKKSGPSPGDGNKFKDSGIYGGINS-GP 78

Query: 81 SPGQGH 86
          S G GH
Sbjct: 79 SDGGGH 84


>D7TTE3_VITVI (tr|D7TTE3) Whole genome shotgun sequence of line PN40024,
          scaffold_129.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00000214001 PE=4 SV=1
          Length = 94

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 6/67 (8%)

Query: 24 TQARPLNTLESHGPRVRD----KGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDG 79
             RP N L+   PR  D    +GFFDGL LGAIKQSGPSPG G++ T++ + GGI   G
Sbjct: 22 IHGRPFNVLKK--PRGPDGEEMRGFFDGLSLGAIKQSGPSPGNGHKFTNAGTLGGIKDSG 79

Query: 80 PSPGQGH 86
          PSPG+GH
Sbjct: 80 PSPGEGH 86


>A5AV37_VITVI (tr|A5AV37) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_011346 PE=4 SV=1
          Length = 231

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 44/62 (70%), Gaps = 2/62 (3%)

Query: 27 RPLNTLES-HGPRVRD-KGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDGPSPGQ 84
          RP N L+   GP   + +GFFDGL LGAIKQSGPSPG G++ T++ + GGI   GPSPG 
Sbjct: 25 RPFNVLKKPRGPDGEEMRGFFDGLSLGAIKQSGPSPGNGHKFTNAGTLGGIKDSGPSPGN 84

Query: 85 GH 86
          GH
Sbjct: 85 GH 86


>B9IHA0_POPTR (tr|B9IHA0) ABC transporter family protein OS=Populus trichocarpa
          GN=POPTRDRAFT_575968 PE=4 SV=1
          Length = 147

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 6  LNYLVRCXXXXXXXXGSKTQARPLNTLESHGPRVRD--KGFFDGLFLGAIKQSGPSPGQG 63
          L++ V             T+ARP NT++S         + FFDGL LG IKQSGP+PG G
Sbjct: 8  LSFFVILLIVNSLFFMETTEARPFNTMKSRNSAASRAIESFFDGLSLGEIKQSGPTPGVG 67

Query: 64 NRLTDSRSFGGINKDGPSPGQGH 86
          N  T+S++ GGI KDGPSP  G+
Sbjct: 68 NGFTNSKTLGGI-KDGPSPCCGN 89


>B9HH32_POPTR (tr|B9HH32) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_655074 PE=4 SV=1
          Length = 97

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 3/66 (4%)

Query: 23 KTQARPLNTLESHGPRVR--DKGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDGP 80
          +T+ARP N L+S         + FFDGL LG IKQSGPSPG G+  T+S++ GGI K GP
Sbjct: 25 ETEARPFNILKSGNSATSRAIESFFDGLSLGEIKQSGPSPGVGHEFTNSQTLGGI-KAGP 83

Query: 81 SPGQGH 86
          SP  G+
Sbjct: 84 SPCCGN 89


>D7SVD1_VITVI (tr|D7SVD1) Whole genome shotgun sequence of line PN40024,
          scaffold_68.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00032935001 PE=4 SV=1
          Length = 353

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 4/69 (5%)

Query: 22 SKTQARPLNTLES-HGPR-VRDKGFFDGLFLGAIKQSGPSPGQGNRLTDS--RSFGGINK 77
          +  Q RP N L+    P      GFFDGL L  IKQS PSPG+GN+ T+   R  GGINK
Sbjct: 21 TAIQGRPFNGLKKPQSPAGTGVMGFFDGLSLRTIKQSRPSPGEGNKFTNVVRRLGGGINK 80

Query: 78 DGPSPGQGH 86
           GPSPGQGH
Sbjct: 81 PGPSPGQGH 89


>B9H6K5_POPTR (tr|B9H6K5) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_651120 PE=4 SV=1
          Length = 96

 Score = 60.5 bits (145), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 5/67 (7%)

Query: 23 KTQARPLNTLE---SHGPRVRDKGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDG 79
          +T+ARP + ++   S   R  +  FFDGL LG +KQSGPSPG GN  T+S++ GGI KDG
Sbjct: 24 ETEARPFSVVKPRNSASSRAIES-FFDGLSLGELKQSGPSPGVGNSFTNSQTLGGI-KDG 81

Query: 80 PSPGQGH 86
          PSP  G+
Sbjct: 82 PSPCCGN 88


>A5AUC9_VITVI (tr|A5AUC9) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_028519 PE=4 SV=1
          Length = 97

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 4/69 (5%)

Query: 22 SKTQARPLNTLES-HGPR-VRDKGFFDGLFLGAIKQSGPSPGQGNRLTDS--RSFGGINK 77
          +  Q RP N L+    P      GFFDGL L  IKQS PSPG+GN+ T+   R  GGINK
Sbjct: 21 TAIQGRPFNGLKKPQSPAGAGVMGFFDGLSLRTIKQSRPSPGEGNKFTNVVRRLGGGINK 80

Query: 78 DGPSPGQGH 86
           GPSPGQGH
Sbjct: 81 PGPSPGQGH 89


>B9HCF0_POPTR (tr|B9HCF0) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_761766 PE=4 SV=1
          Length = 369

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 5/66 (7%)

Query: 24 TQARPLNTLESHGPRVRDKG---FFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDGP 80
          T+ARP N ++S G     +G   FFDGL LG IK+ GPSPG G+  T+S + GGI ++GP
Sbjct: 26 TEARPFNIMKS-GNSAASRGTESFFDGLSLGGIKE-GPSPGAGHEFTNSGTLGGIKEEGP 83

Query: 81 SPGQGH 86
          SP  GH
Sbjct: 84 SPSAGH 89


>C6T2U6_SOYBN (tr|C6T2U6) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 135

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)

Query: 25 QARPLNTLESHGPRV--RDKGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDGPSP 82
          +ARPL+ +E+        +  FFD L LGA+K SGPSPG G++ T+S + GGI   GPSP
Sbjct: 26 EARPLSIIETGKSATGGEEVDFFDWLALGAMKDSGPSPGVGHKFTNSETLGGIKDSGPSP 85

Query: 83 -GQGH 86
           G+GH
Sbjct: 86 GGKGH 90


>C6TFH4_SOYBN (tr|C6TFH4) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 132

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 6/64 (9%)

Query: 24 TQARPLNTLESH----GPRVRDKGFFDGLFLGAIKQSGPSPGQGNRLTDSRSFGGINKDG 79
          ++ARPL+ +E+     G  V D  FFD L LGA+K SGPSPG G++ T+S + GGI   G
Sbjct: 22 SEARPLSIIETEKSVTGGEVVD--FFDWLSLGAMKDSGPSPGVGHKFTNSETLGGIKDSG 79

Query: 80 PSPG 83
          PS G
Sbjct: 80 PSSG 83