Jatropha Genome Database

JcCB0034461.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0034461.10 - phase: 0 
         (186 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RF12_RICCO (tr|B9RF12) Putative uncharacterized protein OS=Ric...   137   7e-31
B9MZR5_POPTR (tr|B9MZR5) Predicted protein OS=Populus trichocarp...   104   5e-21
B9MZR4_POPTR (tr|B9MZR4) Predicted protein OS=Populus trichocarp...    92   3e-17
A5C8T2_VITVI (tr|A5C8T2) Putative uncharacterized protein OS=Vit...    76   2e-12

>B9RF12_RICCO (tr|B9RF12) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1430300 PE=4 SV=1
          Length = 183

 Score =  137 bits (344), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/192 (49%), Positives = 113/192 (58%), Gaps = 18/192 (9%)

Query: 1   MDQREDQFQTKGICSRLYNFMTKTLAIYALKSVKLGHPLHKNFARARTRPPCNSDLMVQP 60
           +DQR+D  QT GIC+RLYNF+ K L ++A KSV LG PL+++ A   T+    +D M   
Sbjct: 2   VDQRKDHLQTLGICNRLYNFIKKLLLMHAYKSVILGDPLYRDSAETETKAANENDHMAHS 61

Query: 61  VTQEETPFEGVE-QTLNIKNSDPFFPNSSSINGLKQEGKELQEVQENNSNF-----NGEK 114
             QEE   E  E Q  N+ NSDP            Q   EL   Q+NN N        E 
Sbjct: 62  KPQEEKLSEVAEDQAHNMNNSDPSV----------QLSDELTAFQDNNDNVIEPGKEPEA 111

Query: 115 IEAKVPKKVVSINDRVEEIDTXXXXXXXXXXXENLTSFEQEEEEPKPLKSILKVGSFSGE 174
           +EAK PKK VSI+DRVEEIDT           ENL   E+EEEEPKPL+SILKVGS+SGE
Sbjct: 112 VEAKPPKKSVSISDRVEEIDT-RKKIRRKKSKENLILVEEEEEEPKPLRSILKVGSYSGE 170

Query: 175 -KSNSFVNRTSD 185
            KSNSFVN T D
Sbjct: 171 NKSNSFVNPTID 182


>B9MZR5_POPTR (tr|B9MZR5) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_782848 PE=4 SV=1
          Length = 185

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 100/191 (52%), Gaps = 14/191 (7%)

Query: 1   MDQREDQFQTKGICSRLYNFMTKTLAIYALKSVKLGHPLHKNFARARTRPPCNSDLMVQP 60
           MD +  Q  +  IC+RLYN +TK ++  A K+VKLGHP+H+N A+ +       D  V P
Sbjct: 1   MDHKGHQIHSLDICNRLYNLVTKIVSAQAFKTVKLGHPVHQNLAKTQNGAIHEGDHEVHP 60

Query: 61  VTQ---EETPFEGVEQTLNIKNSDPFFPNSSSINGLKQEGKELQEVQENNSNFNGEKIEA 117
            T    EE   E V+Q  ++KN D F  + SS N  +QE   L        +   +   A
Sbjct: 61  RTTDQGEEPGCEDVKQEDSLKNWDAFASSCSSSNDREQEEAPLP------YSLVAQAKPA 114

Query: 118 KVPKKVVSINDRVEEIDTXXXXXXXXXXXENLTSFEQEEEEPKPLKSILKVGSFS----G 173
           K+ KK+VSINDRVEEI T           E L S + EE+  +P+KSILK  SF      
Sbjct: 115 KI-KKMVSINDRVEEIGTRKKMKRSWKSTEKLPSIDLEEDIVQPVKSILKKDSFEHCDLA 173

Query: 174 EKSNSFVNRTS 184
           EKS  F++  S
Sbjct: 174 EKSIFFIHCDS 184


>B9MZR4_POPTR (tr|B9MZR4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_782847 PE=4 SV=1
          Length = 227

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 92/176 (52%), Gaps = 14/176 (7%)

Query: 16  RLYNFMTKTLAIYALKSVKLGHPLHKNFARARTRPPCNSDLMVQPVTQ---EETPFEGVE 72
           RLYN +TK ++  A K+VKLGHP+H+N A+ +       D  V P T    EE   E V+
Sbjct: 58  RLYNLVTKIVSAQAFKTVKLGHPVHQNLAKTQNGAIHEGDHEVHPRTTDQGEEPGCEDVK 117

Query: 73  QTLNIKNSDPFFPNSSSINGLKQEGKELQEVQENNSNFNGEKIEAKVPKKVVSINDRVEE 132
           Q  ++KN D F  + SS N  +QE   L        +   +   AK+ KK+VSINDRVEE
Sbjct: 118 QEDSLKNWDAFASSCSSSNDREQEEAPLP------YSLVAQAKPAKI-KKMVSINDRVEE 170

Query: 133 IDTXXXXXXXXXXXENLTSFEQEEEEPKPLKSILKVGSFS----GEKSNSFVNRTS 184
           I T           E L S + EE+  +P+KSILK  SF      EKS  F++  S
Sbjct: 171 IGTRKKMKRSWKSTEKLPSIDLEEDIVQPVKSILKKDSFEHCDLAEKSIFFIHCDS 226


>A5C8T2_VITVI (tr|A5C8T2) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_007360 PE=4 SV=1
          Length = 193

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 89/187 (47%), Gaps = 16/187 (8%)

Query: 1   MDQREDQFQTKGICSRLYNFMTKTLAIYALKSVKLGHPL-------HKNFARARTRPPCN 53
           MDQR +  ++ GIC RL+NF++KTL   ALK + L  PL       H+ F  A       
Sbjct: 1   MDQRRNHLESLGICYRLFNFISKTLESQALKLMILCQPLSHGLAICHRLFNFAMQTLAAQ 60

Query: 54  SDLMVQPVTQEETPFEGVEQTLNIKNSDPFFPNSSSINGLKQEGKELQEVQENNSNFNGE 113
           +   V+PV   +   + + Q      S P    +S  + L +  KEL             
Sbjct: 61  A---VKPVILGQPGHQPLGQVPVSDASAPIATITSPRSVLNKGYKELP-----IGPGTAA 112

Query: 114 KIEAKVPKKVVSINDRVEEIDTXXXXXXXXXXXENLTSFEQEE-EEPKPLKSILKVGSFS 172
           + + K  KK VSIN+ VEEI             E L S E+E+ EEPKPLKSILKVGS  
Sbjct: 113 QPQEKGLKKSVSINETVEEIPNTRKSRKKKMAPEKLVSLEREKGEEPKPLKSILKVGSNL 172

Query: 173 GEKSNSF 179
             KS SF
Sbjct: 173 TGKSVSF 179