Jatropha Genome Database

JcCB0033401.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0033401.20 + phase: 0 /partial
         (176 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RL60_RICCO (tr|B9RL60) Nucleic acid binding protein, putative ...   213   9e-54
D7U897_VITVI (tr|D7U897) Whole genome shotgun sequence of line P...   193   6e-48
B9HBD4_POPTR (tr|B9HBD4) Predicted protein OS=Populus trichocarp...   177   3e-43
D7KSN0_ARALY (tr|D7KSN0) Zinc finger (CCCH-type) family protein ...   157   4e-37
C6T6Z0_SOYBN (tr|C6T6Z0) Putative uncharacterized protein (Fragm...   149   1e-34
C0PF38_MAIZE (tr|C0PF38) Putative uncharacterized protein OS=Zea...   130   6e-29
B6SW16_MAIZE (tr|B6SW16) Nucleic acid binding protein OS=Zea may...   130   6e-29
B9FQS9_ORYSJ (tr|B9FQS9) Putative uncharacterized protein OS=Ory...   126   9e-28
B8B264_ORYSI (tr|B8B264) Putative uncharacterized protein OS=Ory...   111   3e-23

>B9RL60_RICCO (tr|B9RL60) Nucleic acid binding protein, putative OS=Ricinus
           communis GN=RCOM_1667360 PE=4 SV=1
          Length = 282

 Score =  213 bits (541), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 108/176 (61%), Positives = 119/176 (67%), Gaps = 13/176 (7%)

Query: 1   MPFKKELCRNFQRGSCQYGERCKFLHPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGF 60
           M F+KE+CRNFQRGSCQYGERCKFLH                                GF
Sbjct: 1   MAFRKEVCRNFQRGSCQYGERCKFLH---VNNQQQQSNNNSFGFGSQQKQQNQSSSPFGF 57

Query: 61  GVQSKAANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQPDNQPQAVNHKCTDPESC 120
           G QSK++           KPFENKWTRFSPISN      SRQPDNQPQ  NHKCTDP+SC
Sbjct: 58  GTQSKSST----------KPFENKWTRFSPISNAAATPSSRQPDNQPQPANHKCTDPDSC 107

Query: 121 KREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDAKRGLSLQSI 176
           KR+I EDF++EKPLWKLTCYGHSK GPCDI GDVSYEELRA+AYD+AK GL+LQSI
Sbjct: 108 KRQIAEDFQNEKPLWKLTCYGHSKNGPCDIGGDVSYEELRALAYDEAKHGLTLQSI 163


>D7U897_VITVI (tr|D7U897) Whole genome shotgun sequence of line PN40024,
           scaffold_70.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00034266001 PE=4 SV=1
          Length = 394

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/172 (58%), Positives = 109/172 (63%), Gaps = 7/172 (4%)

Query: 11  FQRGSCQYGERCKFLHPIXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXGFGVQS---- 64
            Q   CQYGERCKFLH                                  GFGVQS    
Sbjct: 9   IQLNICQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQSNSLP 68

Query: 65  KAANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQPDNQPQAVNHKCTDPESCKREI 124
           K  +DFG+K Q  FKPFENKWTRFSP++ G   S SRQ DNQ Q  NHKCTDPESCKR+I
Sbjct: 69  KGTSDFGSK-QNHFKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQI 127

Query: 125 IEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDAKRGLSLQSI 176
           +EDFEHE+P+WKLTCYGH K  PCDI GD+SYEELR  AYDDA RGLSLQSI
Sbjct: 128 VEDFEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSI 179


>B9HBD4_POPTR (tr|B9HBD4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_652935 PE=4 SV=1
          Length = 195

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/184 (54%), Positives = 110/184 (59%), Gaps = 21/184 (11%)

Query: 4   KKELCRNFQRGSCQYGERCKFLHPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFGVQ 63
           KKE CRNFQRGSCQYG+RCKFLH                                GFG +
Sbjct: 4   KKEPCRNFQRGSCQYGDRCKFLH--VTPQQPPKSSNNPFGFGNQQTPNNNNNNSFGFGNR 61

Query: 64  SK----------AANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQ-PDNQPQAVNH 112
            +          A N+  N + QQFKPFENKW+R      G     SRQ PD+QP   NH
Sbjct: 62  QQQQRPNSPFGSAPNNSANNRPQQFKPFENKWSR------GASAPSSRQRPDSQP--ANH 113

Query: 113 KCTDPESCKREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDAKRGLS 172
            C DP+SCKR I EDFEHE+PLWKLTCYGH + GPCDI GDVSYEELRA AYDD KRGLS
Sbjct: 114 NCADPDSCKRLIAEDFEHERPLWKLTCYGHLRDGPCDIIGDVSYEELRAAAYDDYKRGLS 173

Query: 173 LQSI 176
           LQSI
Sbjct: 174 LQSI 177


>D7KSN0_ARALY (tr|D7KSN0) Zinc finger (CCCH-type) family protein OS=Arabidopsis
           lyrata subsp. lyrata GN=ARALYDRAFT_476679 PE=4 SV=1
          Length = 441

 Score =  157 bits (397), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/175 (48%), Positives = 110/175 (62%), Gaps = 7/175 (4%)

Query: 3   FKKELCRNFQRGSCQYGERCKFLHPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFGV 62
            +KELCRNFQRGSC+YGE C+FLHP                               GFGV
Sbjct: 1   MRKELCRNFQRGSCRYGENCRFLHP-QQAKPNNPFGFGTQQQPQQQQQQQNSSNPFGFGV 59

Query: 63  QSKAANDFGNKQQQQFKPFENKWTRF-SPISNGGGGSQSRQPDNQPQAVNHKCTDPESCK 121
           Q       G+ +  QF+PFEN W+R  S  + GGG + ++Q   Q Q  +HKCTDP +CK
Sbjct: 60  QGG-----GSSRPNQFQPFENTWSRTASTPTGGGGAAAAQQAGKQTQPADHKCTDPAACK 114

Query: 122 REIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDAKRGLSLQSI 176
           R + +DF++E+P+WKLTCYGH K  PCD+ GD+SYEELRA+AY++AKRG+ LQSI
Sbjct: 115 RVMQDDFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAMAYEEAKRGIPLQSI 169


>C6T6Z0_SOYBN (tr|C6T6Z0) Putative uncharacterized protein (Fragment) OS=Glycine
           max PE=2 SV=1
          Length = 197

 Score =  149 bits (375), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 104/189 (55%), Gaps = 23/189 (12%)

Query: 5   KELCRNFQRGSCQYGERCKFLHPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ 58
           +++CRNFQRGSCQYGERC++LH                                      
Sbjct: 2   RDICRNFQRGSCQYGERCRYLHVQQQRKPNVNGFGGQSSSYQQQNTNPFGFGSGSQQQQQ 61

Query: 59  ------GFGVQSKAANDFGNKQQQ---QFKPFENKWTRFS--PISNGGGGSQSRQPDNQP 107
                 GFG Q+ +  + G   +    Q+KPFENKW R S  P  NG       + +N  
Sbjct: 62  QKGNPFGFGKQNSSQLNGGPHSEHKPNQYKPFENKWNRQSSKPQQNG------VKSENNS 115

Query: 108 QAVNHKCTDPESCKREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDA 167
           +  +H CTDPE+CKR+I  DFE EKPLW LTCY H K  PCDI GD+SYEELRA AY+DA
Sbjct: 116 KQTDHICTDPENCKRQIAVDFEQEKPLWILTCYSHCKGAPCDIVGDISYEELRASAYEDA 175

Query: 168 KRGLSLQSI 176
           KRG++LQSI
Sbjct: 176 KRGMNLQSI 184


>C0PF38_MAIZE (tr|C0PF38) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 401

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 99/189 (52%), Gaps = 19/189 (10%)

Query: 1   MPFKKELCRNFQRGSCQYGERCKFLHPIXXXX-------------XXXXXXXXXXXXXXX 47
           M  ++ELCRNFQRGSC+YG  C+F+H                                  
Sbjct: 1   MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQF 60

Query: 48  XXXXXXXXXXXGFGVQSKAANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQPDNQP 107
                      GFGVQ  AA    N   Q  KPF+NKW R     +    ++ ++    P
Sbjct: 61  QQQQQQKPNPFGFGVQGSAAAQSRNAPGQA-KPFQNKWVR-----DPSAPTKQQEAAQPP 114

Query: 108 QAVNHKCTDPESCKREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDA 167
            A +  CTDPESC+++I EDF++E PLWKLTCY H + GPCDI GD+S+EELRA AY+  
Sbjct: 115 AAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGDISFEELRANAYEQG 174

Query: 168 KRGLSLQSI 176
           ++G  LQSI
Sbjct: 175 RQGHPLQSI 183


>B6SW16_MAIZE (tr|B6SW16) Nucleic acid binding protein OS=Zea mays PE=2 SV=1
          Length = 401

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 99/189 (52%), Gaps = 19/189 (10%)

Query: 1   MPFKKELCRNFQRGSCQYGERCKFLHPIXXXX-------------XXXXXXXXXXXXXXX 47
           M  ++ELCRNFQRGSC+YG  C+F+H                                  
Sbjct: 1   MDRRQELCRNFQRGSCKYGSHCRFVHASSQQQQQAKPNPFGFGLGSRQQQQQQSSFRAQF 60

Query: 48  XXXXXXXXXXXGFGVQSKAANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQPDNQP 107
                      GFGVQ  AA    N   Q  KPF+NKW R     +    ++ ++    P
Sbjct: 61  QQQQQQKPNPFGFGVQGSAAAQSRNAPGQA-KPFQNKWVR-----DPSAPTKQQEAAQPP 114

Query: 108 QAVNHKCTDPESCKREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDA 167
            A +  CTDPESC+++I EDF++E PLWKLTCY H + GPCDI GD+S+EELRA AY+  
Sbjct: 115 AAAHTSCTDPESCRQQIAEDFKNETPLWKLTCYAHLRSGPCDITGDISFEELRANAYEQG 174

Query: 168 KRGLSLQSI 176
           ++G  LQSI
Sbjct: 175 RQGHPLQSI 183


>B9FQS9_ORYSJ (tr|B9FQS9) Putative uncharacterized protein OS=Oryza sativa subsp.
           japonica GN=OsJ_22559 PE=4 SV=1
          Length = 1360

 Score =  126 bits (316), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 102/192 (53%), Gaps = 21/192 (10%)

Query: 1   MPFKKELCRNFQRGSCQYGERCKFLHPIXXXXXXXXXXX----------------XXXXX 44
           M  ++E+CRNFQRGSC+YG +C++LH                                  
Sbjct: 1   MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQ 60

Query: 45  XXXXXXXXXXXXXXGFGVQSKAANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQPD 104
                         GFGVQ   AN          KPF+NKW R  P S     +++ QP 
Sbjct: 61  FQQQQQQQQKPNPFGFGVQ--GANAQSRNAPGPAKPFQNKWVR-DP-SAPTKQTEAVQPP 116

Query: 105 NQPQAVNHKCTDPESCKREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAY 164
            Q QA +  C DP+SC+++I EDF++E P+WKLTCY H + GPC+I GD+S+EELRA AY
Sbjct: 117 -QAQAAHTSCEDPQSCRQQISEDFKNEAPIWKLTCYAHLRNGPCNIKGDISFEELRAKAY 175

Query: 165 DDAKRGLSLQSI 176
           ++ K+G SLQSI
Sbjct: 176 EEGKQGHSLQSI 187


>B8B264_ORYSI (tr|B8B264) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_24382 PE=4 SV=1
          Length = 1267

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 5/118 (4%)

Query: 59  GFGVQSKAANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQPDNQPQAVNHKCTDPE 118
           GFGVQ   AN          KPF+NKW R  P S     +++ QP  Q QA +  C DP+
Sbjct: 77  GFGVQ--GANAQSRNAPGPAKPFQNKWVR-DP-SAPTKQAEAVQPP-QAQAAHTSCEDPQ 131

Query: 119 SCKREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDAKRGLSLQSI 176
           SC+++I EDF++E P+WKLTCY H + GPCDI GD+S+EELRA AY++ K+G SLQSI
Sbjct: 132 SCRQQISEDFKNEAPIWKLTCYAHLRNGPCDIKGDISFEELRAKAYEEGKQGHSLQSI 189