Jatropha Genome Database

JcCB0031871.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0031871.10 - phase: 0 /partial
         (80 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RP33_RICCO (tr|B9RP33) UDP-sugar transporter, putative OS=Rici...   104   2e-21
B9HAF2_POPTR (tr|B9HAF2) Predicted protein OS=Populus trichocarp...    94   5e-18
B9IKY2_POPTR (tr|B9IKY2) Predicted protein OS=Populus trichocarp...    92   2e-17
C6TGJ6_SOYBN (tr|C6TGJ6) Putative uncharacterized protein OS=Gly...    91   4e-17
A8MRY9_ARATH (tr|A8MRY9) Uncharacterized protein At4g32272.1 OS=...    88   4e-16
D7MA66_ARALY (tr|D7MA66) Putative uncharacterized protein OS=Ara...    82   2e-14
B8AFF3_ORYSI (tr|B8AFF3) Putative uncharacterized protein OS=Ory...    78   4e-13
Q6K5Y4_ORYSJ (tr|Q6K5Y4) Os02g0614100 protein OS=Oryza sativa su...    77   4e-13
C5XXM5_SORBI (tr|C5XXM5) Putative uncharacterized protein Sb04g0...    74   4e-12
B4FA00_MAIZE (tr|B4FA00) Putative uncharacterized protein OS=Zea...    74   5e-12
B9IMV7_POPTR (tr|B9IMV7) Predicted protein OS=Populus trichocarp...    72   2e-11
B9SMF3_RICCO (tr|B9SMF3) Putative uncharacterized protein OS=Ric...    69   1e-10
D7SUV4_VITVI (tr|D7SUV4) Whole genome shotgun sequence of line P...    68   3e-10
D7TC52_VITVI (tr|D7TC52) Whole genome shotgun sequence of line P...    66   1e-09
A9SV58_PHYPA (tr|A9SV58) Predicted protein OS=Physcomitrella pat...    65   2e-09
D7L2P2_ARALY (tr|D7L2P2) Putative uncharacterized protein OS=Ara...    61   5e-08
O49364_ARATH (tr|O49364) Putative uncharacterized protein AT4g32...    56   2e-06

>B9RP33_RICCO (tr|B9RP33) UDP-sugar transporter, putative OS=Ricinus communis
          GN=RCOM_0923870 PE=4 SV=1
          Length = 356

 Score =  104 bits (260), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 2/79 (2%)

Query: 1  MASNSSNNPILPVXXXXXXXXXXXXRLIKGGDEKLFRGSAMTKRGAYAAISYMSCAVLLV 60
          MASNSSNN ILP+            RLIKG D+K+FRGSAMTKRGAYAAISYMSCAVLLV
Sbjct: 1  MASNSSNNSILPLSTSPSDDKEKE-RLIKG-DDKIFRGSAMTKRGAYAAISYMSCAVLLV 58

Query: 61 MFNKAALSSYKFPSANVMS 79
          +FNKAALSS+ FPSANV++
Sbjct: 59 IFNKAALSSFNFPSANVIT 77


>B9HAF2_POPTR (tr|B9HAF2) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_867756 PE=4 SV=1
          Length = 354

 Score = 94.0 bits (232), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 51/54 (94%), Gaps = 1/54 (1%)

Query: 26 RLIKGGDEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          RLIKG DEK FRGS+MTKRGAYAAISYMSCAVLLV+FNKAALSSY FPSANV++
Sbjct: 28 RLIKG-DEKAFRGSSMTKRGAYAAISYMSCAVLLVLFNKAALSSYNFPSANVIT 80


>B9IKY2_POPTR (tr|B9IKY2) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_825743 PE=4 SV=1
          Length = 341

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 3/74 (4%)

Query: 8  NPILPVXXXXXXXXXX--XXRLIKGGDEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKA 65
          NPILPV              RL+KG D+K+FRGS+MTKRGA AAISYMSCAVLL++FNKA
Sbjct: 13 NPILPVFVSSISEERQREKERLVKG-DDKVFRGSSMTKRGANAAISYMSCAVLLILFNKA 71

Query: 66 ALSSYKFPSANVMS 79
          ALSSY FPSANV++
Sbjct: 72 ALSSYSFPSANVIT 85


>C6TGJ6_SOYBN (tr|C6TGJ6) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 345

 Score = 90.9 bits (224), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 9/77 (11%)

Query: 3  SNSSNNPILPVXXXXXXXXXXXXRLIKGGDEKLFRGSAMTKRGAYAAISYMSCAVLLVMF 62
          SNSS N +LPV                  D+KLF+GSAMTKRGA+AA+SYMSCAVLLVMF
Sbjct: 6  SNSSENLMLPVSDPPKS---------HDADDKLFKGSAMTKRGAFAAVSYMSCAVLLVMF 56

Query: 63 NKAALSSYKFPSANVMS 79
          NKAALSSY FPSANV++
Sbjct: 57 NKAALSSYNFPSANVIT 73


>A8MRY9_ARATH (tr|A8MRY9) Uncharacterized protein At4g32272.1 OS=Arabidopsis
          thaliana GN=At4g32272 PE=4 SV=1
          Length = 344

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 2/73 (2%)

Query: 7  NNPILPVXXXXXXXXXXXXRLIKGGDEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAA 66
          NNP+LPV               KG D++LF+GSAMTKRGAYAA+SYM+CAV+LV+FNKAA
Sbjct: 3  NNPVLPVSDPPLAGENDSDG--KGVDDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAA 60

Query: 67 LSSYKFPSANVMS 79
          LSSY FP  NV++
Sbjct: 61 LSSYDFPCVNVIT 73


>D7MA66_ARALY (tr|D7MA66) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_491505 PE=4 SV=1
          Length = 342

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 45/48 (93%)

Query: 32 DEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          D++LF+GSAMTKRGAYAA+SYM+CAV+LV+FNKAALSSY FP  NV++
Sbjct: 24 DDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAALSSYDFPCVNVIT 71


>B8AFF3_ORYSI (tr|B8AFF3) Putative uncharacterized protein OS=Oryza sativa
          subsp. indica GN=OsI_08058 PE=4 SV=1
          Length = 293

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 43/48 (89%)

Query: 32 DEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          D  LF+GSAMT+RGA AA+SYM+C+VLLVMFNKAALSSY FP ANV++
Sbjct: 28 DAALFKGSAMTRRGAVAALSYMACSVLLVMFNKAALSSYNFPCANVIT 75


>Q6K5Y4_ORYSJ (tr|Q6K5Y4) Os02g0614100 protein OS=Oryza sativa subsp. japonica
          GN=OJ2055_H10.17 PE=2 SV=1
          Length = 346

 Score = 77.4 bits (189), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 43/48 (89%)

Query: 32 DEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          D  LF+GSAMT+RGA AA+SYM+C+VLLVMFNKAALSSY FP ANV++
Sbjct: 28 DAALFKGSAMTRRGAVAALSYMACSVLLVMFNKAALSSYNFPCANVIT 75


>C5XXM5_SORBI (tr|C5XXM5) Putative uncharacterized protein Sb04g025940
          OS=Sorghum bicolor GN=Sb04g025940 PE=4 SV=1
          Length = 349

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 42/45 (93%)

Query: 35 LFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          LF+GSAMT+RGA AA+SYM+C+VLLVMFNKAALSSY FP ANV++
Sbjct: 34 LFKGSAMTRRGAAAALSYMACSVLLVMFNKAALSSYNFPCANVIT 78


>B4FA00_MAIZE (tr|B4FA00) Putative uncharacterized protein OS=Zea mays PE=2
          SV=1
          Length = 311

 Score = 73.9 bits (180), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 41/45 (91%)

Query: 35 LFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          LF+GSAMT+RG  AA+SYM+C+VLLVMFNKAALSSY FP ANV++
Sbjct: 33 LFKGSAMTRRGGTAALSYMACSVLLVMFNKAALSSYNFPCANVIT 77


>B9IMV7_POPTR (tr|B9IMV7) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_909659 PE=4 SV=1
          Length = 337

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 42/49 (85%), Gaps = 2/49 (4%)

Query: 31 GDEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          G EK   GSAMTK+GAYAAISYM+ AVLLVMFNKAALSSY FP ANV++
Sbjct: 19 GKEK--NGSAMTKQGAYAAISYMASAVLLVMFNKAALSSYSFPYANVIT 65


>B9SMF3_RICCO (tr|B9SMF3) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1074130 PE=4 SV=1
          Length = 163

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 41/53 (77%)

Query: 27 LIKGGDEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          L+   +EK    S MTKRGAYAAISYM+ AVLLVMFNKAALSSY F  ANV++
Sbjct: 9  LLPVTEEKQKNDSVMTKRGAYAAISYMASAVLLVMFNKAALSSYSFQYANVIT 61


>D7SUV4_VITVI (tr|D7SUV4) Whole genome shotgun sequence of line PN40024,
          scaffold_8.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00035867001 PE=4 SV=1
          Length = 311

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 37/39 (94%)

Query: 41 MTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          M+KRGAYAAISYMSCAVLLV+FNKAALSSY FP A+V++
Sbjct: 1  MSKRGAYAAISYMSCAVLLVIFNKAALSSYHFPCASVIT 39


>D7TC52_VITVI (tr|D7TC52) Whole genome shotgun sequence of line PN40024,
          scaffold_16.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00015580001 PE=4 SV=1
          Length = 340

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 34/40 (85%)

Query: 40 AMTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
           MTKRG YAAISYM CA+LL++FNKA LSSY FP ANV++
Sbjct: 29 GMTKRGVYAAISYMVCAILLILFNKAVLSSYNFPYANVIT 68


>A9SV58_PHYPA (tr|A9SV58) Predicted protein OS=Physcomitrella patens subsp.
          patens GN=PHYPADRAFT_135801 PE=4 SV=1
          Length = 309

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 35/39 (89%)

Query: 41 MTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          MT+RG   A+SYM+CAVLLVMFNKAALSSYKFP ANV++
Sbjct: 1  MTRRGLMVALSYMACAVLLVMFNKAALSSYKFPCANVIT 39


>D7L2P2_ARALY (tr|D7L2P2) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_319460 PE=4 SV=1
          Length = 313

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 35/39 (89%)

Query: 41 MTKRGAYAAISYMSCAVLLVMFNKAALSSYKFPSANVMS 79
          M+  G +AAISYM+ AVLLVMFNKAALSSY+FPSANV++
Sbjct: 1  MSSTGVFAAISYMASAVLLVMFNKAALSSYRFPSANVIT 39


>O49364_ARATH (tr|O49364) Putative uncharacterized protein AT4g32270
          OS=Arabidopsis thaliana GN=F10M6.90 PE=2 SV=1
          Length = 364

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 7  NNPILPVXXXXXXXXXXXXRLIKGGDEKLFRGSAMTKRGAYAAISYMSCAVLLVMFNKAA 66
          NNP+LPV               KG D++LF+GSAMTKRGAYAA+SYM+CA   + F    
Sbjct: 3  NNPVLPVSDPPLAGENDSDG--KGVDDRLFKGSAMTKRGAYAALSYMACAGNFLDFTCII 60

Query: 67 LSSYKFPS 74
           S++ F S
Sbjct: 61 DSNHVFWS 68