Jatropha Genome Database

JcCB0018541.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0018541.20 + phase: 0 
         (129 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9T6N9_RICCO (tr|B9T6N9) Putative uncharacterized protein OS=Ric...   106   1e-21
B9I8V2_POPTR (tr|B9I8V2) Predicted protein (Fragment) OS=Populus...    85   3e-15
Q9M372_ARATH (tr|Q9M372) Putative uncharacterized protein F15G16...    69   1e-10
B9GQH0_POPTR (tr|B9GQH0) Predicted protein OS=Populus trichocarp...    66   1e-09
D7LSC7_ARALY (tr|D7LSC7) Putative uncharacterized protein (Fragm...    62   2e-08
B9RCP7_RICCO (tr|B9RCP7) Putative uncharacterized protein OS=Ric...    58   4e-07

>B9T6N9_RICCO (tr|B9T6N9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0236920 PE=4 SV=1
          Length = 136

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/105 (52%), Positives = 74/105 (70%), Gaps = 10/105 (9%)

Query: 23  LAIWDLGSPLYDSYELVSVSYLIERHLMTLPSLGGGSRRLISRKVLPPPH-----PATIF 77
           LA+WDLGSPLYDSYE+VS+S+LIERHLMTLPSLG    R +S+K+ PPP      PAT+ 
Sbjct: 20  LAVWDLGSPLYDSYEVVSLSHLIERHLMTLPSLGS---RKLSKKIFPPPFSDNVVPATL- 75

Query: 78  VGAAAAGDCNHDRSSMVKSFRGFVKERLWRKKRNAIGPRKVKSES 122
             A++A     DR S+ K+ R F++ +LWRK++N +G  K   +S
Sbjct: 76  -PASSAEKDTLDRPSLAKTLREFIRVKLWRKRKNGVGDTKDDEKS 119


>B9I8V2_POPTR (tr|B9I8V2) Predicted protein (Fragment) OS=Populus trichocarpa
           GN=POPTRDRAFT_664087 PE=4 SV=1
          Length = 135

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 10/108 (9%)

Query: 22  ALAIWDLGSPLYDSYELVSVSYLIERHLMTLPSLGGGSRRLISRKVLPPPHPATIFVGAA 81
            LAIWDLGSPLYDSYE+VS+++LIER LMTLPSLGG  R  +S K+  P       + AA
Sbjct: 20  TLAIWDLGSPLYDSYEVVSLTHLIERQLMTLPSLGGSKR--LSSKIFSPACDDHAVIPAA 77

Query: 82  -------AAGDCNHDRSSMVKSFRGFVKERLWRKKRNAIGPRKVKSES 122
                  +  +    RSSM+ +   FV+ +L R+ R+ IG    K ES
Sbjct: 78  LLESNMGSKRETKRGRSSMLNNLTEFVRRQL-RRSRSWIGSNNRKDES 124


>Q9M372_ARATH (tr|Q9M372) Putative uncharacterized protein F15G16.50
           OS=Arabidopsis thaliana GN=At3g61660 PE=4 SV=1
          Length = 129

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 25  IWDLGSPLYDSYELVSVSYLIERHLMTLPSLGGGSRRLISRKVLPPPHPATIFVGAAAAG 84
           +WD GSPLYDSYELVS++++IERH M+LPSL G  +   SR+  P         GA    
Sbjct: 9   LWDCGSPLYDSYELVSLTHIIERHFMSLPSLAGAGKVCCSRR--PSDLEEKANRGANTVV 66

Query: 85  D-CNHDRSSMVKSFRGFVKERLWRKKRNA 112
           D C    S+  K   G    + W++K+N 
Sbjct: 67  DLCCSSDSTTGKLLCGAFGTKWWKRKQNT 95


>B9GQH0_POPTR (tr|B9GQH0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_552251 PE=4 SV=1
          Length = 137

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 4/93 (4%)

Query: 22  ALAIWDLGSPLYDSYELVSVSYLIERHLMTLPSLGGGSRRLISRKVLPPP--HPATIFV- 78
           ALAIWDLGSPLYDS+E+VS++++IERHLMT+    GGS+    +K+       PA I V 
Sbjct: 19  ALAIWDLGSPLYDSHEVVSLAHVIERHLMTVLPSPGGSKGFSPKKISQASVVDPAAILVS 78

Query: 79  GAAAAGDCNHDR-SSMVKSFRGFVKERLWRKKR 110
              +  +    R SS + +   FV+ +L  KK+
Sbjct: 79  NMGSKSETKRVRSSSKLNTLSEFVRRKLRIKKK 111


>D7LSC7_ARALY (tr|D7LSC7) Putative uncharacterized protein (Fragment)
          OS=Arabidopsis lyrata subsp. lyrata
          GN=ARALYDRAFT_486654 PE=4 SV=1
          Length = 122

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query: 25 IWDLGSPLYDSYELVSVSYLIERHLMTLPSLGGGSRRLISR 65
          +WD GSPLYDSYELVS++++IERH M+LPSL G  +   SR
Sbjct: 9  LWDCGSPLYDSYELVSLTHIIERHFMSLPSLAGAGKVCCSR 49


>B9RCP7_RICCO (tr|B9RCP7) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1691130 PE=4 SV=1
          Length = 127

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 1/41 (2%)

Query: 25 IWDLGSPLYDSYELVSVSYLIERHLMTLPSLGGGSRRLISR 65
          +WD GSPLYDSYE+ SV ++IERH+M LPS   GS+R I R
Sbjct: 15 VWDCGSPLYDSYEIASVGHVIERHMMALPS-SCGSKRFIFR 54