Jatropha Genome Database

JcCB0013651.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0013651.20 + phase: 0 
         (166 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A9PF23_POPTR (tr|A9PF23) Predicted protein OS=Populus trichocarp...   178   1e-43
D7TR78_VITVI (tr|D7TR78) Whole genome shotgun sequence of line P...   149   1e-34
A9PDJ3_POPTR (tr|A9PDJ3) Putative uncharacterized protein OS=Pop...   147   5e-34
B9N8F8_POPTR (tr|B9N8F8) Predicted protein OS=Populus trichocarp...   147   5e-34
D7TR75_VITVI (tr|D7TR75) Whole genome shotgun sequence of line P...   143   6e-33
A5BGG7_VITVI (tr|A5BGG7) Putative uncharacterized protein OS=Vit...   137   3e-31
D7ME73_ARALY (tr|D7ME73) Putative uncharacterized protein OS=Ara...    79   2e-13
Q8L772_ARATH (tr|Q8L772) Expressed protein OS=Arabidopsis thalia...    77   7e-13

>A9PF23_POPTR (tr|A9PF23) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_822745 PE=2 SV=1
          Length = 155

 Score =  178 bits (452), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/167 (62%), Positives = 121/167 (72%), Gaps = 13/167 (7%)

Query: 1   MADPTSRTRAQMAPTNDDNRLKCACDAGILSDACPYDNANDHDIDSEDSNQP-QSSDSES 59
           MAD   R R       ++NRLK ACDAG+++   P D        SEDSN P  S    S
Sbjct: 1   MADAADRARPN---REEENRLKHACDAGMVTGEVPSD--------SEDSNNPLSSDSVSS 49

Query: 60  CESTRLDDLAASCFRVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLRT 119
               RL DLAAS FRVFS+S++RM+LAEMEMI+ARE SR EAEKRRMEL+AELTRMML+T
Sbjct: 50  ESPPRLADLAAS-FRVFSESMARMDLAEMEMIKAREASRLEAEKRRMELEAELTRMMLQT 108

Query: 120 QLQIASVVAGKGPNKKRKRVEQEEDESAISTREGALLLSLLQCNFSF 166
           QLQIAS+VAGKG ++KRKRV +EE E  I +REGALLLSLLQCNF F
Sbjct: 109 QLQIASIVAGKGTSRKRKRVGEEEGELPILSREGALLLSLLQCNFFF 155


>D7TR78_VITVI (tr|D7TR78) Whole genome shotgun sequence of line PN40024,
           scaffold_235.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00004816001 PE=4 SV=1
          Length = 175

 Score =  149 bits (375), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/145 (61%), Positives = 107/145 (73%), Gaps = 8/145 (5%)

Query: 18  DNRLKCACDAGILSDACPYDNANDHDIDSEDSNQPQSSDSESC----ESTRLDDLAASCF 73
           D RLK A DAG LS A P D     D D+ DS  P  S SESC    ES RL DLAAS F
Sbjct: 15  DKRLKYAFDAGFLSGAHPPDTPVTVDSDNRDSTIPLGSTSESCDSADESKRLADLAAS-F 73

Query: 74  RVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLRTQLQIASVVAGKGPN 133
           RVFS+SL+RMELAEMEM++ARE  R EAEKRR+E +AE+T+M+L+TQLQIAS+V+ + P+
Sbjct: 74  RVFSESLARMELAEMEMLKAREAFRLEAEKRRLESEAEMTQMLLQTQLQIASLVS-RSPS 132

Query: 134 KKRKRVEQEEDESAISTREGALLLS 158
           +KRKR   EED+ +IS REG LLLS
Sbjct: 133 RKRKR--GEEDDPSISEREGGLLLS 155


>A9PDJ3_POPTR (tr|A9PDJ3) Putative uncharacterized protein OS=Populus trichocarpa
           PE=2 SV=1
          Length = 155

 Score =  147 bits (370), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/154 (61%), Positives = 114/154 (74%), Gaps = 13/154 (8%)

Query: 1   MADPTSRTRAQMAPTNDDNRLKCACDAGILSDACPYDNANDHDIDSEDSNQPQSSDSESC 60
           MAD   RTR   A   ++NRLK ACDAG++S   P D        SEDSN P SSDS S 
Sbjct: 1   MADAADRTRQNRA---EENRLKHACDAGMVSGEIPSD--------SEDSNNPPSSDSVSS 49

Query: 61  EST-RLDDLAASCFRVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLRT 119
            S  RL DLAA+ FRVFS++++RM+LAEMEMI+ARE SR EAEKRRMEL+AELTRMML+T
Sbjct: 50  VSPPRLADLAAN-FRVFSETMARMDLAEMEMIKAREASRLEAEKRRMELEAELTRMMLQT 108

Query: 120 QLQIASVVAGKGPNKKRKRVEQEEDESAISTREG 153
           +L+IAS+VAGKG   KRKR  +E++E  IS+REG
Sbjct: 109 RLRIASIVAGKGMGSKRKRAGEEDEEMPISSREG 142


>B9N8F8_POPTR (tr|B9N8F8) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_828525 PE=4 SV=1
          Length = 155

 Score =  147 bits (370), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/159 (61%), Positives = 119/159 (74%), Gaps = 13/159 (8%)

Query: 1   MADPTSRTRAQMAPTNDDNRLKCACDAGILSDACPYDNANDHDIDSEDSNQPQSSDSESC 60
           MAD   RTR   A   ++NRLK ACDAG++S   P D        SEDSN P SSDS S 
Sbjct: 1   MADAADRTRQNRA---EENRLKHACDAGMVSGEIPSD--------SEDSNNPPSSDSVSS 49

Query: 61  EST-RLDDLAASCFRVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLRT 119
            S  RL DLAA+ FRVFS++++RM+LAEMEMI+ARE SR EAEKRRMEL+AELTRMML+T
Sbjct: 50  VSPPRLADLAAN-FRVFSETMARMDLAEMEMIKAREASRLEAEKRRMELEAELTRMMLQT 108

Query: 120 QLQIASVVAGKGPNKKRKRVEQEEDESAISTREGALLLS 158
           +L+IAS+VAGKG   KRKR  +E++E  IS+REGALLL+
Sbjct: 109 RLRIASIVAGKGMGSKRKRAGEEDEEMPISSREGALLLN 147


>D7TR75_VITVI (tr|D7TR75) Whole genome shotgun sequence of line PN40024,
           scaffold_235.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00004813001 PE=4 SV=1
          Length = 182

 Score =  143 bits (361), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/141 (60%), Positives = 103/141 (73%), Gaps = 8/141 (5%)

Query: 18  DNRLKCACDAGILSDACPYDNANDHDIDSEDSNQPQSSDSESC----ESTRLDDLAASCF 73
           D RLK A DAG LS A P D     D D+ DS  P  S SESC    ES RL DLAAS F
Sbjct: 34  DKRLKYAFDAGFLSGAHPPDTPVTVDSDNRDSTIPLGSTSESCDSADESKRLADLAAS-F 92

Query: 74  RVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLRTQLQIASVVAGKGPN 133
           RVFS+SL+RMELAEMEM++ARE  R EAEKRR+E +AE+T+M+L+TQLQIAS+V+ + P+
Sbjct: 93  RVFSESLARMELAEMEMLKAREAFRLEAEKRRLESEAEMTQMLLQTQLQIASLVS-RSPS 151

Query: 134 KKRKRVEQEEDESAISTREGA 154
           +KRKR   EED+ +IS REG 
Sbjct: 152 RKRKR--GEEDDPSISEREGG 170


>A5BGG7_VITVI (tr|A5BGG7) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_031348 PE=4 SV=1
          Length = 148

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/138 (60%), Positives = 101/138 (73%), Gaps = 8/138 (5%)

Query: 18  DNRLKCACDAGILSDACPYDNANDHDIDSEDSNQPQSSDSESC----ESTRLDDLAASCF 73
           D RLK A DAG LS A P D     D D+ DS  P  S SESC    ES RL DLAAS F
Sbjct: 15  DKRLKYAFDAGFLSGAHPPDTPVTVDSDNRDSTIPLGSTSESCDSADESKRLADLAAS-F 73

Query: 74  RVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLRTQLQIASVVAGKGPN 133
           RVFS+SL+RMELAEMEM++ARE  R EAEKRR+E +AE+T+M+L+TQLQIAS+V+ + P+
Sbjct: 74  RVFSESLARMELAEMEMLKAREAFRLEAEKRRLESEAEMTQMLLQTQLQIASLVS-RSPS 132

Query: 134 KKRKRVEQEEDESAISTR 151
           +KRKR   EED+ +IS R
Sbjct: 133 RKRKR--GEEDDPSISER 148


>D7ME73_ARALY (tr|D7ME73) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_492649 PE=4 SV=1
          Length = 148

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 6/96 (6%)

Query: 59  SCESTRLDDLAASCFRVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLR 118
           SC+S     L+A   RV SDSL R ELAEMEMI+ARE +R EAEKRR+E++ +LT+M+L+
Sbjct: 53  SCDSATSTGLSA-IIRVLSDSLLRTELAEMEMIKAREAARLEAEKRRLEMEVDLTQMVLQ 111

Query: 119 TQLQ-IASVVAGKGP----NKKRKRVEQEEDESAIS 149
           T LQ   S++ G+       +KRKR + EE ES+ +
Sbjct: 112 THLQATTSLLVGEHKISPAQRKRKRSDVEELESSTT 147


>Q8L772_ARATH (tr|Q8L772) Expressed protein OS=Arabidopsis thaliana GN=At4g22160
           PE=4 SV=1
          Length = 117

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 7/92 (7%)

Query: 69  AASCFRVFSDSLSRMELAEMEMIRARETSRWEAEKRRMELDAELTRMMLRTQLQ-IASVV 127
            ++  RV SDSL R ELAEMEMI+ARE +R EAEKRR+E++ +LT+M+L+T LQ ++S+ 
Sbjct: 11  VSAMIRVLSDSLLRTELAEMEMIKAREAARLEAEKRRLEMEVDLTQMVLQTHLQAMSSLP 70

Query: 128 AGKGP----NKKRKRVEQEEDESAISTREGAL 155
            G+       +KRKR + EE ES  STRE ++
Sbjct: 71  VGEHKIYQAQRKRKRSDVEELES--STREKSI 100