Jatropha Genome Database
- JcCB0010841.20
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0010841.20 - phase: 0 /partial
(181 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9SMA1_RICCO (tr|B9SMA1) Protein ABC1, mitochondrial, putative O... 182 1e-44
B9GT46_POPTR (tr|B9GT46) Predicted protein OS=Populus trichocarp... 165 2e-39
D7TFR1_VITVI (tr|D7TFR1) Whole genome shotgun sequence of line P... 144 3e-33
D7KYY4_ARALY (tr|D7KYY4) ABC1 family protein OS=Arabidopsis lyra... 120 6e-26
Q7XQV1_ORYSJ (tr|Q7XQV1) OSJNBb0079B02.1 protein OS=Oryza sativa... 99 2e-19
Q01HY4_ORYSA (tr|Q01HY4) OSIGBa0138H21-OSIGBa0138E01.12 protein ... 99 2e-19
B8AV74_ORYSI (tr|B8AV74) Putative uncharacterized protein OS=Ory... 99 2e-19
C5Y8Y0_SORBI (tr|C5Y8Y0) Putative uncharacterized protein Sb06g0... 94 7e-18
B8LLY2_PICSI (tr|B8LLY2) Putative uncharacterized protein OS=Pic... 76 1e-12
Q5JQY0_ORYSA (tr|Q5JQY0) OSJNBb0003B01.25 protein OS=Oryza sativ... 76 2e-12
A9TBH8_PHYPA (tr|A9TBH8) Predicted protein OS=Physcomitrella pat... 59 3e-07
A9TCW5_PHYPA (tr|A9TCW5) Predicted protein OS=Physcomitrella pat... 54 5e-06
>B9SMA1_RICCO (tr|B9SMA1) Protein ABC1, mitochondrial, putative OS=Ricinus
communis GN=RCOM_0297470 PE=4 SV=1
Length = 711
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 122/184 (66%), Gaps = 3/184 (1%)
Query: 1 SFRARTERALVKRQIEDTGSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATLD 60
S RARTERALVKRQ ED S+VAIKEILSFTLTEKG+FV+EILLQEVAKGLDALG+ATLD
Sbjct: 528 SLRARTERALVKRQTEDAVSKVAIKEILSFTLTEKGTFVREILLQEVAKGLDALGVATLD 587
Query: 61 FLTXXXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXSGSQKNGSSIEEVKGP--YRN 118
LT MTEED++N SGSQKNGSS EV+G Y+
Sbjct: 588 SLTSVATASIPFSTPFSSSSMTEEDMVNLRTLKRLVLLLSGSQKNGSSAAEVQGSKTYKV 647
Query: 119 PNIFLEE-VSDFYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTIR 177
N++LEE + FYQL SVQ+ILP LSVI D+AGRL+SRA ART+R
Sbjct: 648 QNVYLEEALPIFYQLSSVQEILPFLSVIPELPLELQQQLLLMPGDLAGRLVSRAAARTVR 707
Query: 178 RMFL 181
RMFL
Sbjct: 708 RMFL 711
>B9GT46_POPTR (tr|B9GT46) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_849535 PE=4 SV=1
Length = 704
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 114/184 (61%), Gaps = 4/184 (2%)
Query: 1 SFRARTERALVKRQIEDTGSRVAIKEILSFTLTEKGSFVKEILLQEVAK--GLDALGLAT 58
S RARTE+ALVK Q+ED S+VA+K+ILSFTLTEKG+FV+EILLQE+AK GLDA GLAT
Sbjct: 522 SLRARTEKALVKSQLEDNDSKVAVKQILSFTLTEKGAFVREILLQEIAKASGLDAFGLAT 581
Query: 59 LDFLTXXXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXSGSQKNGSSIEEVKGPYRN 118
LD+LT MTEED+MN SG QKNG S Y N
Sbjct: 582 LDYLT-SMANTSIPFAASSSSSMTEEDMMNLRTFRRLMLILSGFQKNGGSPVVRSCAYFN 640
Query: 119 PNIFLEEVS-DFYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTIR 177
N+ EE S FYQ S ++ILP+LSVI AD+AGRLISR TARTIR
Sbjct: 641 QNMHSEEASLIFYQFPSAEEILPILSVIPELPPELQQQLLLLPADLAGRLISRVTARTIR 700
Query: 178 RMFL 181
R+FL
Sbjct: 701 RVFL 704
>D7TFR1_VITVI (tr|D7TFR1) Whole genome shotgun sequence of line PN40024,
scaffold_126.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00013666001 PE=4 SV=1
Length = 714
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 112/190 (58%), Gaps = 14/190 (7%)
Query: 1 SFRARTERALVKRQIEDTGSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATLD 60
S RARTERALV +Q+E T SR+ +K+ILSFTLTEKG+FV+E+LL+E AKGLDALGLATLD
Sbjct: 530 SLRARTERALVTKQMEGTDSRLVVKQILSFTLTEKGTFVREMLLEEFAKGLDALGLATLD 589
Query: 61 FLTXXXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXSGSQKNGSSIEEVKGPYRNPN 120
+T MT++DI N SG QK SS + R N
Sbjct: 590 SITSVTATTLPFSASRPFSSMTDDDINNLRTLRRLLLLLSGPQKTESSSK-----VRAFN 644
Query: 121 IFL--------EEVS-DFYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRA 171
+ EEVS FYQL SVQ+ILP+LS+I +++AGRL+SR
Sbjct: 645 CLIYKVLIKDSEEVSLAFYQLASVQEILPILSIIPELPPELQQQLLLLPSNLAGRLMSRV 704
Query: 172 TARTIRRMFL 181
ARTIRR+FL
Sbjct: 705 AARTIRRIFL 714
>D7KYY4_ARALY (tr|D7KYY4) ABC1 family protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_476302 PE=4 SV=1
Length = 692
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 5 RTERALVKRQIEDTGSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATLDFLTX 64
R E ALV++ + T S +A+K++L+FT TE+GSFV+EILL+E AKGLDA GLATLD T
Sbjct: 524 RAETALVQKPLVGTDSNIAMKQMLAFTFTEQGSFVREILLREFAKGLDAFGLATLDSFT- 582
Query: 65 XXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXSGSQKNGSSIEEVKGPYRNPNIFLE 124
+TEED+ N SG QK S ++ V Y + L+
Sbjct: 583 -------FSGSGPSTSLTEEDMTNLRTFYRLISLFSGMQKAESQVKAVSK-YGEALMPLD 634
Query: 125 EVS-DFYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTIRRMFL 181
E S YQL S Q++LP+LS++ D+ GRL+SRA ARTIRRMFL
Sbjct: 635 EASLVMYQLPSAQEMLPILSILPELPQESQQRLLQLPGDLVGRLVSRAFARTIRRMFL 692
>Q7XQV1_ORYSJ (tr|Q7XQV1) OSJNBb0079B02.1 protein OS=Oryza sativa subsp. japonica
GN=OSJNBb0079B02.1 PE=2 SV=2
Length = 720
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 1 SFRARTERALVKRQIEDT-GSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATL 59
S RARTE++L + Q E+T S+ AIK++LSFTLTE+G+FVK++LLQE+AKGLDALG ATL
Sbjct: 536 SLRARTEQSLTRDQQEETDSSKFAIKQVLSFTLTEQGAFVKDLLLQEIAKGLDALGAATL 595
Query: 60 DFLTXXXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXS--GSQKNGSSIEEVKGPYR 117
T + ED N S +++ S I
Sbjct: 596 SSATSAAASRLPFAVPSPSPSLDNEDATNLRNLHRLLLLLSKVPQKEDSSPIPGYNSTEE 655
Query: 118 NPNIFLEEVS-DFYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTI 176
N +E+S Y++ S+ ++LPVLSVI AD+ RL+SRA ARTI
Sbjct: 656 NEGDSTDEISLVLYEMRSLPELLPVLSVIPELPPESQQQFLLLPADLTNRLLSRAVARTI 715
Query: 177 RRMFL 181
RR+F+
Sbjct: 716 RRIFI 720
>Q01HY4_ORYSA (tr|Q01HY4) OSIGBa0138H21-OSIGBa0138E01.12 protein OS=Oryza sativa
GN=OSIGBa0138H21-OSIGBa0138E01.12 PE=4 SV=1
Length = 720
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 1 SFRARTERALVKRQIEDT-GSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATL 59
S RARTE++L + Q E+T S+ AIK++LSFTLTE+G+FVK++LLQE+AKGLDALG ATL
Sbjct: 536 SLRARTEQSLTRDQQEETDSSKFAIKQVLSFTLTEQGAFVKDLLLQEIAKGLDALGAATL 595
Query: 60 DFLTXXXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXS--GSQKNGSSIEEVKGPYR 117
T + ED N S +++ S I
Sbjct: 596 SSATSAAASRLPFAVPSPSPSLDNEDATNLRNLHRLLLLLSKVPQKEDSSPIPGYNSTEE 655
Query: 118 NPNIFLEEVS-DFYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTI 176
N +E+S Y++ S+ ++LPVLSVI AD+ RL+SRA ARTI
Sbjct: 656 NEGDSTDEISLVLYEMRSLPELLPVLSVIPELPPESQQQFLLLPADLTNRLLSRAVARTI 715
Query: 177 RRMFL 181
RR+F+
Sbjct: 716 RRIFI 720
>B8AV74_ORYSI (tr|B8AV74) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_17613 PE=4 SV=1
Length = 720
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 1 SFRARTERALVKRQIEDT-GSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATL 59
S RARTE++L + Q E+T S+ AIK++LSFTLTE+G+FVK++LLQE+AKGLDALG ATL
Sbjct: 536 SLRARTEQSLTRDQQEETDSSKFAIKQVLSFTLTEQGAFVKDLLLQEIAKGLDALGAATL 595
Query: 60 DFLTXXXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXS--GSQKNGSSIEEVKGPYR 117
T + ED N S +++ S I
Sbjct: 596 SSATSAAASRLPFAVPSPSPSLDNEDATNLRNLHRLLLLLSKVPQKEDSSPIPGYNSTEE 655
Query: 118 NPNIFLEEVS-DFYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTI 176
N +E+S Y++ S+ ++LPVLSVI AD+ RL+SRA ARTI
Sbjct: 656 NEGDSTDEISLVLYEMRSLPELLPVLSVIPELPPESQQQFLLLPADLTNRLLSRAVARTI 715
Query: 177 RRMFL 181
RR+F+
Sbjct: 716 RRIFI 720
>C5Y8Y0_SORBI (tr|C5Y8Y0) Putative uncharacterized protein Sb06g030250 OS=Sorghum
bicolor GN=Sb06g030250 PE=4 SV=1
Length = 706
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 1 SFRARTERALVKRQIEDTGS-RVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATL 59
S RARTE++LV+ Q ED S R AIK++LSFTL ++G+FVK++LLQE+AKG+DALG+ATL
Sbjct: 521 SLRARTEQSLVRNQQEDVDSTRYAIKQVLSFTLADQGAFVKDLLLQEIAKGIDALGVATL 580
Query: 60 DFLTXXXXXXXXXX-XXXXXXXMTEEDIMNXXXXXXXXXXXSG-SQKNGSSIEEVKGPYR 117
T + +ED N S SQK S P
Sbjct: 581 SSATSAAASRLPFAGVPSPLTSLDDEDATNLRNLYRLLLLLSKVSQKGNPS----PSPGY 636
Query: 118 NPNIFLEEVSD------FYQLESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRA 171
N I E S Y++ S+ + LPVLSVI AD+ R++SRA
Sbjct: 637 NSAIEKEGGSTDELSLALYEMSSLPEFLPVLSVIPELPPESQQQLLLLPADLTNRILSRA 696
Query: 172 TARTIRRMFL 181
ARTIRR+F+
Sbjct: 697 VARTIRRLFM 706
>B8LLY2_PICSI (tr|B8LLY2) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 442
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 17 DTGSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATLDFLTXXXXXXXXXXXXX 76
D SR+AIK IL FTL+EKG FV+EILL+E++KG+DAL +T
Sbjct: 273 DKQSRLAIKRILKFTLSEKGDFVREILLEELSKGIDALNRSTFQKAASAVISSLPITFSL 332
Query: 77 XXXXMTEEDIMNXXXXXXXXXXXSG--SQKNGSSIEEVKGPYRNPNI---FLEEVSDFYQ 131
+ +EDI N S +++ +EE + ++ + + V Q
Sbjct: 333 PLHLVEDEDIKNLKTLRRLILALSEGLTEEQNHGLEEGNYLLKEVDVQMTWNDAVVVLQQ 392
Query: 132 LESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTIR 177
L S ++ LP+LSVI AD+AGRL SR ART+R
Sbjct: 393 LSSSKEFLPMLSVILELPLSAQQQSFSLPADLAGRLASRIIARTVR 438
>Q5JQY0_ORYSA (tr|Q5JQY0) OSJNBb0003B01.25 protein OS=Oryza sativa
GN=OSJNBb0003B01.25 PE=4 SV=1
Length = 719
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 1 SFRARTERALVKRQIEDT-GSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATL 59
S RARTE++L + Q E+T S+ AIK++LSFTLTE+G+FVK++LLQE+AKGLDALG ATL
Sbjct: 542 SLRARTEQSLTRDQQEETDSSKFAIKQVLSFTLTEQGAFVKDLLLQEIAKGLDALGAATL 601
Query: 60 DFLTXXXXXXXXXXXXXXXXXMTEEDIMNXXXXXXXXXXXS--GSQKNGSSIEEVKGPYR 117
T + ED N S +++ S I
Sbjct: 602 SSATSAAASRLPFAVPSPSPSLDNEDATNLRNLHRLLLLLSKVPQKEDSSPIPGYNSTEE 661
Query: 118 NPNIFLEEVS-DFYQLESVQDILPVLSVI 145
N +E+S Y++ S+ ++LPVLSVI
Sbjct: 662 NEGDSTDEISLVLYEMRSLPELLPVLSVI 690
>A9TBH8_PHYPA (tr|A9TBH8) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_143179 PE=4 SV=1
Length = 755
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 20 SRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATLDFLTXXXXXXXXXXXXXXXX 79
+R +K +L+F LT++G FV+E++L E+AKG+DA D +
Sbjct: 570 TRNLVKRLLTFALTDQGDFVRELVLDELAKGIDAFNRIAFDAVAHNIQIRSPIALPVIAP 629
Query: 80 XMTEEDIMNXXXXXXXXXXXSGSQKNGS--SIEEVKGPYRNPNIFLEEVSDFYQ-LESVQ 136
+ED N S+ ++ + G ++ +++++D Q L +
Sbjct: 630 VTEDEDRKNLENLQQILNIFMNSESGLGVRTLAGMTGGRGGTSLSMDDITDMLQSLSGLT 689
Query: 137 DILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTIRR 178
LP+LSV+ A++AGR+ SR ARTIRR
Sbjct: 690 QHLPLLSVVPELPFRARQQAVFLPAELAGRVASRVAARTIRR 731
>A9TCW5_PHYPA (tr|A9TCW5) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_143694 PE=4 SV=1
Length = 761
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 5/175 (2%)
Query: 8 RALVKRQIE-DTGSRVAIKEILSFTLTEKGSFVKEILLQEVAKGLDALGLATLDFLTXXX 66
R K ++E + +R +K +L F LTE+G FV+E++L E+AKG+DAL + D
Sbjct: 559 RPAEKEEVEIERNTRNFVKRLLIFGLTEQGDFVRELILDELAKGIDALNRVSFDAAAHNV 618
Query: 67 XXXXXXXXXXXXXXMTEEDIMNXXXX-XXXXXXXSGSQKNGSSIEEVKGPYRNPNIFL-- 123
EED+ N S + V G + N+ L
Sbjct: 619 LTRSPIALPFVAPVTEEEDLKNLENLRQILTVLMKSGNSGSSGVGTVAGMTDDKNLALSM 678
Query: 124 EEVSDFYQ-LESVQDILPVLSVIXXXXXXXXXXXXXXXADIAGRLISRATARTIR 177
++++D Q L + LP LS+ A++AGR+ SR AR IR
Sbjct: 679 DDITDIVQSLTGLTQYLPFLSIFPELPFQARQQAVLLPAELAGRVASRVVARNIR 733