Jatropha Genome Database

JcCB0010741.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0010741.10 + phase: 1 /partial
         (151 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SFG9_RICCO (tr|B9SFG9) Acetyl-CoA carboxylase, putative OS=Ric...   135   2e-30
B9H8C0_POPTR (tr|B9H8C0) Predicted protein OS=Populus trichocarp...   121   3e-26
D7TE06_VITVI (tr|D7TE06) Whole genome shotgun sequence of line P...   118   2e-25
D7KCB3_ARALY (tr|D7KCB3) 3-methylcrotonyl-CoA carboxylase 1 OS=A...    98   4e-19
B8BMW3_ORYSI (tr|B8BMW3) Putative uncharacterized protein OS=Ory...    96   1e-18
C5YRH1_SORBI (tr|C5YRH1) Putative uncharacterized protein Sb08g0...    93   9e-18
B6SKB7_MAIZE (tr|B6SKB7) Methylcrotonoyl-CoA carboxylase subunit...    90   1e-16
C4IZE5_MAIZE (tr|C4IZE5) Putative uncharacterized protein OS=Zea...    89   1e-16
Q40121_SOLLC (tr|Q40121) Biotin-containing subunit of methylcrot...    86   2e-15
A9RNK1_PHYPA (tr|A9RNK1) Predicted protein OS=Physcomitrella pat...    65   2e-09
Q0SFE5_RHOSR (tr|Q0SFE5) Probable methylcrotonoyl-CoA carboxylas...    57   9e-07
C1AYT2_RHOOB (tr|C1AYT2) Acyl-CoA carboxylase alpha chain OS=Rho...    54   4e-06
C7RB33_KANKD (tr|C7RB33) Carbamoyl-phosphate synthase L chain AT...    54   6e-06

>B9SFG9_RICCO (tr|B9SFG9) Acetyl-CoA carboxylase, putative OS=Ricinus communis
           GN=RCOM_0646250 PE=4 SV=1
          Length = 742

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 77/116 (66%)

Query: 26  QDETRXXXXXXXXXXXXFRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXX 85
           +DET+            FRQK+GLDLSDDD+TQH T  ETASHP G+             
Sbjct: 627 KDETKHLHIWHGAHHHHFRQKLGLDLSDDDKTQHMTDVETASHPPGTVVAPMAGLVVKVL 686

Query: 86  XXXXXXXEEGQPVLVLEAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKVS 141
                  EEGQP+LVLEAMKMEHVVKAP  GYV GLQVTAGQQ+SD++LLFSIKVS
Sbjct: 687 VQDGSKVEEGQPILVLEAMKMEHVVKAPFTGYVRGLQVTAGQQISDNSLLFSIKVS 742


>B9H8C0_POPTR (tr|B9H8C0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_559591 PE=4 SV=1
          Length = 760

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 68/97 (70%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           FRQK+ LDLSDD+E Q  T FETA HP G+                    EEGQP+LVLE
Sbjct: 662 FRQKLELDLSDDNEIQQKTNFETALHPPGTVVAPMAGLVVKVLVMDGTKVEEGQPILVLE 721

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           AMKMEHVVKAP +G+VHGLQVTAGQQVSDS+ LFS+K
Sbjct: 722 AMKMEHVVKAPFSGHVHGLQVTAGQQVSDSSPLFSVK 758


>D7TE06_VITVI (tr|D7TE06) Whole genome shotgun sequence of line PN40024,
           scaffold_151.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00001194001 PE=4 SV=1
          Length = 735

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/120 (49%), Positives = 71/120 (59%)

Query: 20  SSTLVCQDETRXXXXXXXXXXXXFRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXX 79
           S  +  +D+T+            FRQ++GL LS DDE QH   FE  SHP G+       
Sbjct: 612 SLAVYSKDQTKHFHIWHGSHHHTFRQRVGLQLSADDEAQHKPSFEATSHPPGTVVAPMAG 671

Query: 80  XXXXXXXXXXXXXEEGQPVLVLEAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
                        EEGQP+LVLEAMKMEHVVKAP  G+VHGLQVTAGQQVSD + LFS++
Sbjct: 672 LVVKVLVKDGTNVEEGQPILVLEAMKMEHVVKAPSGGHVHGLQVTAGQQVSDGSFLFSVQ 731


>D7KCB3_ARALY (tr|D7KCB3) 3-methylcrotonyl-CoA carboxylase 1 OS=Arabidopsis
           lyrata subsp. lyrata GN=MCCA PE=4 SV=1
          Length = 734

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 1/98 (1%)

Query: 43  FRQKIGLDLSDDDE-TQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVL 101
           F+QK+G++ S+D+E  QH T  ET+SHP G+                    ++GQPVLVL
Sbjct: 636 FKQKVGIEFSEDEEGVQHRTSSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPVLVL 695

Query: 102 EAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           EAMKMEHVVKAP +G +  L+V AGQQVSD + LF IK
Sbjct: 696 EAMKMEHVVKAPSSGSIQDLKVKAGQQVSDGSALFRIK 733


>B8BMW3_ORYSI (tr|B8BMW3) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_39029 PE=4 SV=1
          Length = 740

 Score = 95.9 bits (237), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/97 (49%), Positives = 61/97 (62%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           +RQ +  + S DD +Q +   E  SHP+GS                    EEGQPV+V+E
Sbjct: 639 YRQTLRAEQSPDDSSQPSASSEARSHPKGSVLAPMAGLVVKVLLKDGARVEEGQPVMVME 698

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           AMKMEHVVKAP AGYV GL+ TAGQQV DS++LF++K
Sbjct: 699 AMKMEHVVKAPCAGYVEGLKATAGQQVFDSSVLFTVK 735


>C5YRH1_SORBI (tr|C5YRH1) Putative uncharacterized protein Sb08g020810 OS=Sorghum
           bicolor GN=Sb08g020810 PE=4 SV=1
          Length = 752

 Score = 92.8 bits (229), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 60/97 (61%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           +RQ +  + + DD +Q     E  SHP+GS                    E GQPV+V+E
Sbjct: 651 YRQTVRAEHAVDDSSQPCHASEGKSHPKGSVLAPMAGLVVKVLLEDGAQVEAGQPVMVME 710

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           AMKMEHVVKAP AGYV GL+VTAGQQV DS++LF+IK
Sbjct: 711 AMKMEHVVKAPRAGYVDGLKVTAGQQVFDSSVLFTIK 747


>B6SKB7_MAIZE (tr|B6SKB7) Methylcrotonoyl-CoA carboxylase subunit alpha OS=Zea
           mays PE=2 SV=1
          Length = 751

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 62/101 (61%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           +RQ +  + + +D +Q +   E  SHP+GS                    + GQPV+V+E
Sbjct: 650 YRQTVRAEHAVEDSSQPSHASEGKSHPKGSVLAPMAGLVVKVLLEDGAQVDAGQPVMVME 709

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKVSQC 143
           AMKMEHVVKAP AGYV GL+VTAGQQV DS++LF+IK S  
Sbjct: 710 AMKMEHVVKAPRAGYVSGLKVTAGQQVFDSSVLFTIKDSSA 750


>C4IZE5_MAIZE (tr|C4IZE5) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 318

 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 62/101 (61%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           +RQ +  + + +D +Q +   E  SHP+GS                    + GQPV+V+E
Sbjct: 217 YRQTVRAEHAVEDSSQPSHASEGKSHPKGSVLAPMAGLVVKVLLEDGAQVDAGQPVMVME 276

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKVSQC 143
           AMKMEHVVKAP AGYV GL+VTAGQQV DS++LF+IK S  
Sbjct: 277 AMKMEHVVKAPRAGYVSGLKVTAGQQVFDSSVLFTIKDSSA 317


>Q40121_SOLLC (tr|Q40121) Biotin-containing subunit of methylcrotonyl-CoA
           carboxylase (Fragment) OS=Solanum lycopersicum PE=2 SV=1
          Length = 436

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 56/97 (57%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           F+Q++GL++ DD+ET         S+P G+                    +EGQPVLVLE
Sbjct: 339 FKQRMGLEIYDDEETIDKPARVATSYPSGTVIAPMAGLVVKVLVKDGEKVQEGQPVLVLE 398

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           AMKMEHVVKAP  GYV GL++  GQ V D   LF++K
Sbjct: 399 AMKMEHVVKAPANGYVSGLEIKVGQSVQDGIKLFALK 435


>A9RNK1_PHYPA (tr|A9RNK1) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_176782 PE=4 SV=1
          Length = 794

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/48 (62%), Positives = 39/48 (81%)

Query: 93  EEGQPVLVLEAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKV 140
           ++G  +LVLEAMKMEHVVKAP+ G V G ++  GQQV+DST+LF I+V
Sbjct: 744 KKGDSILVLEAMKMEHVVKAPMEGVVKGAELEIGQQVTDSTVLFQIEV 791


>Q0SFE5_RHOSR (tr|Q0SFE5) Probable methylcrotonoyl-CoA carboxylase, alpha chain
           OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro01930 PE=4
           SV=1
          Length = 669

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 35/48 (72%)

Query: 95  GQPVLVLEAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKVSQ 142
           GQP++ LEAMKMEH +KAP +G +  L VTAGQQV   T+L  ++ +Q
Sbjct: 617 GQPIVWLEAMKMEHTIKAPASGVLTELSVTAGQQVDVGTVLAVVEAAQ 664


>C1AYT2_RHOOB (tr|C1AYT2) Acyl-CoA carboxylase alpha chain OS=Rhodococcus opacus
           (strain B4) GN=accA PE=4 SV=1
          Length = 659

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/48 (52%), Positives = 34/48 (70%)

Query: 95  GQPVLVLEAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKVSQ 142
           GQP++ LEAMKMEH +KAP +G +  L VTAGQQV   T+L  ++ + 
Sbjct: 607 GQPIVWLEAMKMEHTIKAPASGVLTELSVTAGQQVDVGTVLAVVEAAH 654


>C7RB33_KANKD (tr|C7RB33) Carbamoyl-phosphate synthase L chain ATP-binding
           OS=Kangiella koreensis (strain DSM 16069 / KCTC 12182 /
           SW-125) GN=Kkor_1056 PE=4 SV=1
          Length = 669

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query: 93  EEGQPVLVLEAMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIKVSQ 142
           E GQP+++LEAMKMEH + AP AG V  +   AG  V D   L S++V++
Sbjct: 620 ESGQPLVILEAMKMEHTINAPTAGVVSEIHYAAGDLVDDGAELLSLEVAE 669