Jatropha Genome Database
- JcCB0009521.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0009521.10 - phase: 1 /pseudo/partial
(167 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9SL51_RICCO (tr|B9SL51) Putative uncharacterized protein OS=Ric... 139 9e-32
B9H9X6_POPTR (tr|B9H9X6) Predicted protein OS=Populus trichocarp... 127 3e-28
D7THZ6_VITVI (tr|D7THZ6) Whole genome shotgun sequence of line P... 122 2e-26
A5BCL5_VITVI (tr|A5BCL5) Putative uncharacterized protein OS=Vit... 120 5e-26
Q9SCL6_ARATH (tr|Q9SCL6) Putative uncharacterized protein T8H10.... 104 3e-21
D7LVU5_ARALY (tr|D7LVU5) Binding protein OS=Arabidopsis lyrata s... 101 2e-20
A2Q3M0_MEDTR (tr|A2Q3M0) Putative uncharacterized protein OS=Med... 94 6e-18
>B9SL51_RICCO (tr|B9SL51) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0089360 PE=4 SV=1
Length = 1054
Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 75/109 (68%), Gaps = 23/109 (21%)
Query: 58 LHKFVKDAVERDHKLDDILIPIIQHVLLISKFPFCTLLIFDVKSSINFSLRSKDLKHGGQ 117
LHKFVKDAVERDH +DDILIPIIQH L+ KDLKHGGQ
Sbjct: 67 LHKFVKDAVERDHPMDDILIPIIQHPLM-----------------------RKDLKHGGQ 103
Query: 118 ALILINWLFQDEFFFQAVVRSLADIIDRKDDRYIALGWCILIRGLVEYE 166
+IL+NWLFQDEF FQAV RSL DII RKDDR+IAL WCI IR LVEYE
Sbjct: 104 GMILVNWLFQDEFLFQAVARSLGDIILRKDDRFIALAWCIFIRSLVEYE 152
>B9H9X6_POPTR (tr|B9H9X6) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_560538 PE=4 SV=1
Length = 549
Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats.
Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 23/109 (21%)
Query: 58 LHKFVKDAVERDHKLDDILIPIIQHVLLISKFPFCTLLIFDVKSSINFSLRSKDLKHGGQ 117
LHK+VKDA+ER KLD IL+PI QH L R+ +LKHGGQ
Sbjct: 49 LHKYVKDAIERHEKLDLILVPITQHCL-----------------------RNVNLKHGGQ 85
Query: 118 ALILINWLFQDEFFFQAVVRSLADIIDRKDDRYIALGWCILIRGLVEYE 166
A+ +INWLFQDEF F+AV L +II+RK+DRY+ALGWCIL+RGLVEYE
Sbjct: 86 AMTIINWLFQDEFVFEAVAMDLTNIIERKEDRYVALGWCILVRGLVEYE 134
>D7THZ6_VITVI (tr|D7THZ6) Whole genome shotgun sequence of line PN40024,
scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00033319001 PE=4 SV=1
Length = 1112
Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/109 (50%), Positives = 75/109 (68%), Gaps = 23/109 (21%)
Query: 58 LHKFVKDAVERDHKLDDILIPIIQHVLLISKFPFCTLLIFDVKSSINFSLRSKDLKHGGQ 117
LH+++K+A +++ +LD+IL+P+I+H SL+ K+ KHG Q
Sbjct: 61 LHRYIKEAADKEERLDEILVPMIEH-----------------------SLKCKESKHGNQ 97
Query: 118 ALILINWLFQDEFFFQAVVRSLADIIDRKDDRYIALGWCILIRGLVEYE 166
A++L+NWLFQDE FQA+ R LADII RK+DRYIALGWC L+RGLVEYE
Sbjct: 98 AMVLLNWLFQDELLFQALARGLADIILRKEDRYIALGWCTLVRGLVEYE 146
>A5BCL5_VITVI (tr|A5BCL5) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_013819 PE=4 SV=1
Length = 831
Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 74/109 (67%), Gaps = 23/109 (21%)
Query: 58 LHKFVKDAVERDHKLDDILIPIIQHVLLISKFPFCTLLIFDVKSSINFSLRSKDLKHGGQ 117
LH+++K+A +++ +LD+IL+P+I+H SL+ K+ KHG Q
Sbjct: 61 LHRYIKEAADKEERLDEILVPMIEH-----------------------SLKCKESKHGNQ 97
Query: 118 ALILINWLFQDEFFFQAVVRSLADIIDRKDDRYIALGWCILIRGLVEYE 166
A++L+NWLFQDE FQA+ R L DII RK+DRYIALGWC L+RGLVEYE
Sbjct: 98 AMVLLNWLFQDELLFQALARGLTDIILRKEDRYIALGWCTLVRGLVEYE 146
>Q9SCL6_ARATH (tr|Q9SCL6) Putative uncharacterized protein T8H10.170
OS=Arabidopsis thaliana GN=T8H10.170 PE=4 SV=1
Length = 1057
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 68/109 (62%), Gaps = 23/109 (21%)
Query: 58 LHKFVKDAVERDHKLDDILIPIIQHVLLISKFPFCTLLIFDVKSSINFSLRSKDLKHGGQ 117
L K V DA ERD + +IL+PII+H +LR KD KHG
Sbjct: 60 LEKCVIDAAERDEAMSEILVPIIEH-----------------------TLRFKDSKHGNP 96
Query: 118 ALILINWLFQDEFFFQAVVRSLADIIDRKDDRYIALGWCILIRGLVEYE 166
A+IL+NWLFQDE FQAV R+L++II R +DR++ALGWC+LIR LVE E
Sbjct: 97 AMILLNWLFQDEVLFQAVSRNLSNIILRNEDRFLALGWCLLIRRLVECE 145
>D7LVU5_ARALY (tr|D7LVU5) Binding protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_486206 PE=4 SV=1
Length = 1082
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 23/107 (21%)
Query: 58 LHKFVKDAVERDHKLDDILIPIIQHVLLISKFPFCTLLIFDVKSSINFSLRSKDLKHGGQ 117
L K V+DA +RD + +IL+PII+H +LR KD KHG
Sbjct: 63 LEKCVRDAAQRDEAMGEILVPIIEH-----------------------TLRFKDSKHGNP 99
Query: 118 ALILINWLFQDEFFFQAVVRSLADIIDRKDDRYIALGWCILIRGLVE 164
A+IL+NWLFQDE FQA+ R+L++II R +DR +ALGWC+LIR LVE
Sbjct: 100 AMILLNWLFQDEVLFQALSRNLSNIISRNEDRILALGWCLLIRRLVE 146
>A2Q3M0_MEDTR (tr|A2Q3M0) Putative uncharacterized protein OS=Medicago truncatula
GN=MtrDRAFT_AC155885g21v2 PE=4 SV=1
Length = 196
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 23/108 (21%)
Query: 59 HKFVKDAVERDHKLDDILIPIIQHVLLISKFPFCTLLIFDVKSSINFSLRSKDLKHGGQA 118
H +V DAV + D +L+PII SL+ KD KH GQA
Sbjct: 72 HTYVTDAVNHNRSFDQLLLPIIHS-----------------------SLKCKDSKHSGQA 108
Query: 119 LILINWLFQDEFFFQAVVRSLADIIDRKDDRYIALGWCILIRGLVEYE 166
+IL+NWLFQDE F V +LA II R DRY++ GWC+L+R +V+YE
Sbjct: 109 IILLNWLFQDELLFIPVAEALASIITRNHDRYLSFGWCLLLRSIVDYE 156