Jatropha Genome Database

JcCB0004891.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004891.10 + phase: 0 
         (215 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RJW7_RICCO (tr|B9RJW7) Putative uncharacterized protein OS=Ric...   206   1e-51
B9H6V8_POPTR (tr|B9H6V8) Predicted protein OS=Populus trichocarp...   145   3e-33
A9PK14_9ROSI (tr|A9PK14) Putative uncharacterized protein OS=Pop...   115   3e-24
C6TKJ0_SOYBN (tr|C6TKJ0) Putative uncharacterized protein OS=Gly...   115   3e-24
A5B0N4_VITVI (tr|A5B0N4) Putative uncharacterized protein OS=Vit...   113   1e-23
C5YMM9_SORBI (tr|C5YMM9) Putative uncharacterized protein Sb07g0...    83   2e-14
A9S3E4_PHYPA (tr|A9S3E4) Predicted protein OS=Physcomitrella pat...    72   4e-11
Q6ZJC9_ORYSJ (tr|Q6ZJC9) Os08g0477800 protein OS=Oryza sativa su...    70   1e-10
B8BBS0_ORYSI (tr|B8BBS0) Putative uncharacterized protein OS=Ory...    70   1e-10
B9S0C5_RICCO (tr|B9S0C5) Putative uncharacterized protein OS=Ric...    67   1e-09
B8LQ11_PICSI (tr|B8LQ11) Putative uncharacterized protein OS=Pic...    64   8e-09
D7TIV1_VITVI (tr|D7TIV1) Whole genome shotgun sequence of line P...    56   2e-06

>B9RJW7_RICCO (tr|B9RJW7) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1039390 PE=4 SV=1
          Length = 216

 Score =  206 bits (524), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/218 (55%), Positives = 151/218 (69%), Gaps = 11/218 (5%)

Query: 1   MEGKSCTSSKNHNSGDAE-ESNAIMQLEGEPMLGDITWVKLHGDSWWPAVVFGSNV---- 55
           MEGK CTSS+ H++ D + +  A   L+ EP +GD+ W+KL    WWPAVV G+N     
Sbjct: 1   MEGKICTSSQTHDNHDDDVKEVAAENLDKEPSIGDVIWIKLPRSLWWPAVVVGNNFDKGN 60

Query: 56  -SGDREIKGVRVRLIGSYEYMYVDPIKCRSEFHITLEKNNGSYEEIFRKALEQDISQSNS 114
            SGDR    VRVRL GSY+YM VDP K   EF I L++NNG Y+EIFRK+LEQD S S S
Sbjct: 61  KSGDRLTGNVRVRLYGSYKYMSVDPFKWHFEFQIILKQNNGCYQEIFRKSLEQDQSGSKS 120

Query: 115 SRVKGKVTKSKEGEKAISKASKQDGVKRKLKLDSLNPEKNTKRKTSNRDGMQKKLKQKSS 174
            +VK KV+KSK+ EK      +  G+KRKLKL S N +KN+KRK+S +D   KK K  + 
Sbjct: 121 GQVKRKVSKSKDIEKP-----EHHGIKRKLKLGSPNTKKNSKRKSSKQDDTPKKNKLNTP 175

Query: 175 STDAASPGRSQELSARRTKVMQTLGLIAPSGSPFHQKD 212
           ++D A  GRSQELSARRTKVMQ+LGLIAPSGSPF + D
Sbjct: 176 TSDKALSGRSQELSARRTKVMQSLGLIAPSGSPFRKID 213


>B9H6V8_POPTR (tr|B9H6V8) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_818446 PE=4 SV=1
          Length = 318

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/320 (36%), Positives = 146/320 (45%), Gaps = 113/320 (35%)

Query: 1   MEGKSCTSSKNHNSGDAEESNAIMQLEGEPMLGDITWVKLHGD-SWWPAVVFGSN----V 55
           M+GK C S  +H   D  E      LE E +LGD+ WV+   D +WWPAVV  +N     
Sbjct: 1   MKGKRCASIGSHERDDEGEELEPEHLEVEHVLGDVMWVRRDDDGTWWPAVVVNNNNISET 60

Query: 56  SGDRE--IKGVRVRLIGSYEYMYVDPIKCRSEFHITLEKNNGSYEEIFRKALEQDISQSN 113
           S  R   +  V VRL GSY+Y Y DP+KCRSEF ITL++N G Y E+F +ALEQD+ QS 
Sbjct: 61  SKPRNSSMGDVLVRLYGSYQYFYADPVKCRSEFEITLKENGGCYSEMFVEALEQDLPQSK 120

Query: 114 SSRVKGKVTKSK---EGEKAISKA--SKQDGV-----------------------KRKLK 145
           S + KGK + SK    G  + SK   S Q+ V                       +RK+K
Sbjct: 121 SGQSKGKGSNSKGTSNGRASASKVKNSNQNRVNCEIESSNHARISPRKQINMNTPQRKMK 180

Query: 146 ---------------------------LDSLNPEKNTKRKTSNRDGM------------- 165
                                       DS N E N+KR+T  +DGM             
Sbjct: 181 DDNFLSKVVEEAISKVSNQDGLEKELKFDSPNTEGNSKRETPKQDGMRNKLKRNFTSTSG 240

Query: 166 -----------QKKLKQKSSS----TDAASP---------------------GRSQELSA 189
                      +K+LKQKSSS     +  SP                     GR QEL  
Sbjct: 241 QAKNKTHDQGEKKRLKQKSSSAAEDANYQSPKKDEEQEKHELSPSSAGGTFFGRLQEL-- 298

Query: 190 RRTKVMQTLGLIAPSGSPFH 209
           RRTKVMQTLGL+APSGSPF+
Sbjct: 299 RRTKVMQTLGLVAPSGSPFN 318


>A9PK14_9ROSI (tr|A9PK14) Putative uncharacterized protein OS=Populus trichocarpa
           x Populus deltoides PE=2 SV=1
          Length = 180

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 83/143 (58%), Gaps = 7/143 (4%)

Query: 1   MEGKSCTSSKNHNSGDAEESNAIMQLEGEPMLGDITWVKLHGDS-WWPAVVFGSN----V 55
           M+GK C S  +H   D  E      LE E +LGD+ WV+   D  WWPAVV   N     
Sbjct: 1   MKGKRCASIGSHERDDEGEELEPEHLEVEHVLGDVMWVRRDDDGMWWPAVVVDDNNISET 60

Query: 56  SGDRE--IKGVRVRLIGSYEYMYVDPIKCRSEFHITLEKNNGSYEEIFRKALEQDISQSN 113
           S  R   +  V VRL GSY+Y Y DP+KCRSEF ITL++N G Y E+F +ALEQD+ QS 
Sbjct: 61  SKPRNSSMGDVLVRLYGSYQYFYADPVKCRSEFEITLKENGGCYSEMFVEALEQDLPQSK 120

Query: 114 SSRVKGKVTKSKEGEKAISKASK 136
           S + KGK + SK      + ASK
Sbjct: 121 SGQSKGKGSNSKGTSNGRANASK 143


>C6TKJ0_SOYBN (tr|C6TKJ0) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 208

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 105/191 (54%), Gaps = 23/191 (12%)

Query: 32  LGDITWVKLHGDSWWPAVVFGSNVSGDREIK----------GVRVRLIGSYEYMYVDPIK 81
           +GD+ +VKL G SWWP  V   N S ++ +K           + VR  GSY Y Y DPIK
Sbjct: 23  VGDVIFVKLRGSSWWPVQVVDEN-SVNKSVKPSKRTKRLPGDILVRHYGSYTYSYADPIK 81

Query: 82  CRSEFHITLEKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKEGEKAISKASKQDGVK 141
           CR EF   LE+N+GS +++  + LEQD+  + S R KG  +K K        +SK    K
Sbjct: 82  CRDEFKRILERNDGSLKKVLLQTLEQDLPSTKSRRSKGSSSKPK------GTSSKDAAGK 135

Query: 142 RKLKLDSLNPEKNTKRKTSNRDGMQKKLKQKSSSTDAASPGRSQELSARRTKVMQTLGLI 201
           RK   +     KN +++T N D           S + +S G+S ELS RR +VM+ LGL+
Sbjct: 136 RKSNWEDKEQNKNKQKETLNVD------DPACQSWETSSLGKSPELSFRRIRVMENLGLV 189

Query: 202 APSGSPFHQKD 212
           AP+GSPF +KD
Sbjct: 190 APAGSPFEKKD 200


>A5B0N4_VITVI (tr|A5B0N4) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_003555 PE=4 SV=1
          Length = 398

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 85/149 (57%), Gaps = 25/149 (16%)

Query: 1   MEGKSCTSSKNHNSGDAEESNAIMQLEGEPMLGDITWVKLHGDSWWPAVVFG------SN 54
           M+GK   SSK+H   + EE  A  QL G+ + GD+ WV+L G SWWPA V        SN
Sbjct: 1   MKGKRLASSKSHVVKE-EEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRSN 59

Query: 55  VSGDREIKGVRVRLIGSYEYMYVDPIKCRSEF-------HI-----------TLEKNNGS 96
             G+R    V VR+ G+Y Y+YVDP KCRSEF       H+            L++NN S
Sbjct: 60  KPGNRSEDEVLVRVYGTYNYLYVDPXKCRSEFENLLRTYHLLVSKIISLKSQILKQNNCS 119

Query: 97  YEEIFRKALEQDISQSNSSRVKGKVTKSK 125
           Y EIF+KALEQD+  +   R KG+ +KSK
Sbjct: 120 YREIFQKALEQDLPSAKCGRSKGRGSKSK 148


>C5YMM9_SORBI (tr|C5YMM9) Putative uncharacterized protein Sb07g023270 OS=Sorghum
           bicolor GN=Sb07g023270 PE=4 SV=1
          Length = 370

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 19/162 (11%)

Query: 32  LGDITWVKLHGDSWWPAVVFGSNVSGDREIK----GVRVRLIGSYEYMYVDPIKCRSEFH 87
           LGDITWVK  G SWWPA V      G +  K       VRL G+ +Y+YVDP K  SEF 
Sbjct: 24  LGDITWVKCSGSSWWPAQVIDELCVGSKPKKKDKYDCLVRLYGTCQYLYVDPWKSNSEFE 83

Query: 88  ITLEKNNGSYEEIFRKALEQDISQSN------------SSRVKGKVTKSKEGEKAISKAS 135
           + L++ N S  E FR+ LE+++S  N            +   KG  TK    + +  KA 
Sbjct: 84  MMLKQENKSTMEAFREVLEKELSGVNLCSDYEDGYEEEAVNSKGGDTKGTSKKTSSRKAR 143

Query: 136 KQDGVKRKLKLDSLNPEKNTKRKTSNRDGMQKKLKQKSSSTD 177
           KQ+GVK   +L +   ++N     + R     + +Q SS+ D
Sbjct: 144 KQEGVK---QLYNEEEDQNVGSNATARKRKGGRARQSSSTHD 182


>A9S3E4_PHYPA (tr|A9S3E4) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_162614 PE=4 SV=1
          Length = 367

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 16/204 (7%)

Query: 15  GDAEESNAIMQLEGEPML--GDITWVKLHGDSWWPAVV-----FGSNVSGDREIK-GVRV 66
           G A+E  ++   E  P    G + W K     WWPA +     F     G+R     V V
Sbjct: 162 GGADEGTSMAVTEASPRFKHGQLVWAKFARFPWWPAEIINERAFQPGTGGNRRSNTDVLV 221

Query: 67  RLIGSYEYMYVDPIKCRSEFHITLEKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKE 126
           R  G+Y+Y +VDP    SEF + +++ +   ++ F+K +E+ +    S ++    T S E
Sbjct: 222 RFFGTYDYGWVDPEVGLSEFDVKMQERSRIKKKAFQKGIEEALEYRRSGKLPDSFTVSTE 281

Query: 127 GEKA-ISKASKQDGVKRKLKLDSLNPE-KNTKRKTSNRDGMQKKLKQKSSSTDAASPGRS 184
            E+    K    +GV R   +    PE + T+++ + R    K L ++          R 
Sbjct: 282 QEEPKTPKKPHSNGV-RANGMGQQTPEDEGTEQRRAARKRKPKVLYEEEERVQ-----RK 335

Query: 185 QELSARRTKVMQTLGLIAPSGSPF 208
            E   RR ++M+ LGL AP+GSPF
Sbjct: 336 PERRLRRLRIMRQLGLAAPTGSPF 359


>Q6ZJC9_ORYSJ (tr|Q6ZJC9) Os08g0477800 protein OS=Oryza sativa subsp. japonica
           GN=OJ1666_A04.14 PE=2 SV=1
          Length = 422

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 5/87 (5%)

Query: 32  LGDITWVKLHGDSWWPAVVFGSNVSGDREIKG----VRVRLIGSYEYMYVDPIKCRSEFH 87
           LGDITWVK H  SWWPA V  ++    +  K     V VRL G+  +MYVDP K   EF 
Sbjct: 32  LGDITWVK-HTGSWWPAQVVENSCISSKPKKTAKHHVPVRLYGTCVHMYVDPWKSNMEFK 90

Query: 88  ITLEKNNGSYEEIFRKALEQDISQSNS 114
           + L++ N S  E F +A+++++S  NS
Sbjct: 91  MMLKRENKSAMEAFHEAVKKELSHVNS 117


>B8BBS0_ORYSI (tr|B8BBS0) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_29607 PE=4 SV=1
          Length = 422

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 5/87 (5%)

Query: 32  LGDITWVKLHGDSWWPAVVFGSNVSGDREIKG----VRVRLIGSYEYMYVDPIKCRSEFH 87
           LGDITWVK H  SWWPA V  ++    +  K     V VRL G+  +MYVDP K   EF 
Sbjct: 32  LGDITWVK-HTGSWWPAQVVENSCISSKPKKTAKHHVPVRLYGTCVHMYVDPWKSNMEFK 90

Query: 88  ITLEKNNGSYEEIFRKALEQDISQSNS 114
           + L++ N S  E F +A+++++S  NS
Sbjct: 91  MMLKRENKSAMEAFHEAVKKELSHVNS 117


>B9S0C5_RICCO (tr|B9S0C5) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1353300 PE=4 SV=1
          Length = 260

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 17/195 (8%)

Query: 19  ESNAIMQLEGEPMLGDITWVKLHGDSWWPAVVFG--SNVSGDRE--IKG-VRVRLIGSYE 73
           ESN I    G     ++ W K     WWPA V G  S++S  R   I G V V+  G + 
Sbjct: 78  ESNGICATPG-----NVVWAKTDQQMWWPAEVIGETSSISDSRSQGIDGHVLVQFYGDHG 132

Query: 74  YMYVDPIKCRSEFHITLEKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKEGEKAISK 133
             +VDP +  S+     E+ + +  + F+ AL++ + +       G++    +G K   +
Sbjct: 133 TAWVDPARDISQLEYCFEERSCNTTDKFQDALKKALERKEDISSHGQLLGCSDGSKQTCQ 192

Query: 134 ASKQDGVKRKLKLDSLNPEKNTKRKTSNRDGMQKKLKQKSSSTDAASPGRSQELSARRTK 193
            ++  G KR   + S        R+ S R     K K K    + A P  +     RR +
Sbjct: 193 QNQSSG-KRTSSISSRTESDYIGRRKSKR-----KEKFKICYDEVAFPPTAAR-KVRRFR 245

Query: 194 VMQTLGLIAPSGSPF 208
           +M+ LGLIAP+GSPF
Sbjct: 246 MMRYLGLIAPTGSPF 260


>B8LQ11_PICSI (tr|B8LQ11) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 241

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 38/207 (18%)

Query: 33  GDITWVKLHGDSWWPAVVFGSN------VSGDREIKGVRVRLIGSYEYMYVDPIKCRSEF 86
           G + W ++    WWP  +          +  DR   GV  R  GS  Y +VDP    S+F
Sbjct: 34  GRLLWARMDQSPWWPVQIVDEKTISQNCIFNDRIKGGVLARFYGSCIYAWVDPFAHVSQF 93

Query: 87  HITLEKNNGSYEEIFRKALEQDI-----------------------SQSN-SSRVKGKVT 122
             +  K  GS    F+KALE+++                       SQ N S  V G   
Sbjct: 94  QGSF-KEKGSNLRAFQKALEEEMLLRSKIVKSSVEPNGKSKYSETSSQHNKSGDVNGISN 152

Query: 123 KSKEGEKAISKASKQDGVKRKLKLDSLNPEKNTKRKTSNRDGMQKKLKQKSSSTDAASPG 182
            +  G+K I ++ ++  +K   +       K TK +   R   Q+K ++K+ S +     
Sbjct: 153 VANVGKKIIFQSREEPAIKTSTR-------KRTKSEELERSRSQRKQREKAPSNEQDVTT 205

Query: 183 RSQELSARRTKVMQTLGLIAPSGSPFH 209
              E   R+ KVM+ LGL AP  SPF+
Sbjct: 206 GGSEKKLRQLKVMRHLGLAAPPDSPFN 232


>D7TIV1_VITVI (tr|D7TIV1) Whole genome shotgun sequence of line PN40024,
           scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00033695001 PE=4 SV=1
          Length = 329

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 38/193 (19%)

Query: 33  GDITWVKLHGDSWWPAVVFGSNVSGDRE--IKG-VRVRLIGSYEYMYVDPIKCRSEFHIT 89
           G + W K     WWPA V     +  R   I G V V+  G++   +VDP +  S F   
Sbjct: 148 GSVVWAKTACQVWWPAEVMEEKSTDSRNQGIDGHVLVQYYGNHHSAWVDPDRDLSLFEDC 207

Query: 90  LEKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKEG-----------EKAISKAS--- 135
            E+ + +  E F+ AL+Q + +        ++  S +G           EK IS  S   
Sbjct: 208 FEERSCNPMEDFQDALKQALHRKRHLNSCRQLVGSPDGPDNLHQQDQSSEKCISSCSSRT 267

Query: 136 KQDGVKRKLKLDSLNPEKNTKRKTSNRDGMQKKLKQKSSSTDAASPGRSQELSARRTKVM 195
           + D ++R                     G  K+ ++     DA +         RR ++M
Sbjct: 268 EDDSIER---------------------GRGKRKRKPKVHFDAVALPLKPARKVRRFRIM 306

Query: 196 QTLGLIAPSGSPF 208
           + LGLIAP GSPF
Sbjct: 307 RYLGLIAPVGSPF 319