Jatropha Genome Database

JcCB0004801.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004801.10 - phase: 0 
         (209 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RH06_RICCO (tr|B9RH06) Putative uncharacterized protein OS=Ric...   100   1e-19
B9N0V6_POPTR (tr|B9N0V6) Predicted protein OS=Populus trichocarp...    74   7e-12
Q9LPW6_ARATH (tr|Q9LPW6) F13K23.8 protein OS=Arabidopsis thalian...    61   9e-08
D7KPD4_ARALY (tr|D7KPD4) Putative uncharacterized protein OS=Ara...    60   2e-07
B9GFH3_POPTR (tr|B9GFH3) Predicted protein OS=Populus trichocarp...    57   1e-06

>B9RH06_RICCO (tr|B9RH06) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1445710 PE=4 SV=1
          Length = 216

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 100/207 (48%), Gaps = 10/207 (4%)

Query: 1   MADPILHKQEGSIPETENGDEATLTSKRKLDSLSIPQAKEVVEE-DRPKKSQKLQSLTEN 59
           M+D ILH++E  +PET + D+ TL SKRKLDSL + Q KE  EE ++P K+QK  SL +N
Sbjct: 1   MSDSILHEEEVPMPETISKDDTTLPSKRKLDSLPVSQIKEKAEETNQPNKTQKSHSLNDN 60

Query: 60  GNSPVHEEKSAANGPLLYSANNSGSNS---EEKNTSEAKXXXXXXXXXXXXXXXXXXXXX 116
           GN    EEKS  N  L  S+N+  SN    EEK  ++                       
Sbjct: 61  GN----EEKSRENKLLESSSNDIASNFSIPEEKPENDVLLVEEEEDDVDYADEDDDDDDD 116

Query: 117 XXXXXXXXXXXXXXGQ-VDRKGKGIMIEKXXXXXXXXXXXXXXX-XXXXXXXXXXXPLAE 174
                            VDRKGKGIMIE+                           PLAE
Sbjct: 117 DDEEEEEEEEEEEENPVVDRKGKGIMIEEEDDDDDDDDDASEMDGGDDDDVELEDDPLAE 176

Query: 175 VDLDNILPSRTRRRAAQPGVYIANDLG 201
           VDLDNILPSRTRR+   PG++I  +LG
Sbjct: 177 VDLDNILPSRTRRKTKHPGIFIGKNLG 203


>B9N0V6_POPTR (tr|B9N0V6) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_597096 PE=4 SV=1
          Length = 181

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 85/189 (44%), Gaps = 27/189 (14%)

Query: 15  ETENGDEATLTSKRKLDSLSIPQAKEVVEEDRPKKSQKLQSLTENGNSPVHEEKSAANGP 74
           ETE  +E  L +KRKLD    P+ K+   E+   KSQKL+SLT   NSP  +EK+     
Sbjct: 3   ETEIPNEPALPTKRKLDEDPFPENKQ---ENHTNKSQKLESLT--NNSPNTQEKTTDRTQ 57

Query: 75  LLYSANNSGSNSEEKNTSEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVD 134
            L ++ N+ +++ +K   E +                                     VD
Sbjct: 58  TLEASFNNQNDTVQKVVEEEEDGDDEDGDYEDEENGEEVL------------------VD 99

Query: 135 RKGKGIMIEKXXXXXXXXXXXXXXXX----XXXXXXXXXXPLAEVDLDNILPSRTRRRAA 190
           RKGKGI+IE+                              PLAEVDLDNILPSRTRR+A 
Sbjct: 100 RKGKGILIEEVEDDDSSDDDGDESSELDGGDDSEEAEEDDPLAEVDLDNILPSRTRRKAV 159

Query: 191 QPGVYIAND 199
            PGVYIAND
Sbjct: 160 HPGVYIAND 168


>Q9LPW6_ARATH (tr|Q9LPW6) F13K23.8 protein OS=Arabidopsis thaliana GN=At1g12830
           PE=4 SV=1
          Length = 213

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 29/32 (90%)

Query: 171 PLAEVDLDNILPSRTRRRAAQPGVYIANDLGN 202
           PLAEVDLDNILPSRTRRR++QPGV+I N+  N
Sbjct: 167 PLAEVDLDNILPSRTRRRSSQPGVFIPNEFSN 198


>D7KPD4_ARALY (tr|D7KPD4) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_471437 PE=4 SV=1
          Length = 212

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 30/32 (93%)

Query: 171 PLAEVDLDNILPSRTRRRAAQPGVYIANDLGN 202
           PLAEVDLDNILPSRTRRR++QPGV+I+N+  N
Sbjct: 165 PLAEVDLDNILPSRTRRRSSQPGVFISNENSN 196


>B9GFH3_POPTR (tr|B9GFH3) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_549768 PE=4 SV=1
          Length = 230

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 133 VDRKGKGIMIEKXXXXXXXXXXXXXXXXXXXXXXXXXXPLAEVDLDNILPSRTRRRAAQP 192
           VDRKGKGI+IE+                          PLAEVDLDNILPSRTRR+   P
Sbjct: 156 VDRKGKGILIEEGDEDDDDDGSELEGGDDSEEAEEDD-PLAEVDLDNILPSRTRRKVVHP 214

Query: 193 GVYI 196
           GVYI
Sbjct: 215 GVYI 218