Jatropha Genome Database

JcCA0317631.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317631.20 + phase: 0 /pseudo/partial
         (102 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q5AJY0_CANAL (tr|Q5AJY0) Putative uncharacterized protein OS=Can...    67   5e-10

>Q5AJY0_CANAL (tr|Q5AJY0) Putative uncharacterized protein OS=Candida albicans
           GN=CaO19.11522 PE=4 SV=1
          Length = 118

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 56/100 (56%)

Query: 1   FLSQPGMEIFPSYH*ALMTVSILSAIKSLLCKLKHIPLVPMEIASLTPIVLNLNPTIPAS 60
           FLS  GM + PSY  A++ VS  SAI SL CK   IP VP+ I S TP+ LN     PA 
Sbjct: 17  FLSHEGMAMLPSYSWAMVMVSKESAIISLSCKEYFIPSVPLVIPSDTPMELNCMAFKPAL 76

Query: 61  FTPSLTASDSLSKCMLQVFPSYQTEEIPI*GLLRSSSDKP 100
            T S  +  +  KCML   P +QTE  PI    +SSS KP
Sbjct: 77  LTDSEHSLFNSIKCMLHGLPDHQTEPTPICARSKSSSSKP 116