Jatropha Genome Database

JcCA0316311.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316311.10 - phase: 0 /pseudo
         (254 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9T718_RICCO (tr|B9T718) Pre-rRNA-processing protein ESF1, putat...    94   1e-17
D7UEG0_VITVI (tr|D7UEG0) Whole genome shotgun sequence of line P...    88   1e-15
D7T5Q5_VITVI (tr|D7T5Q5) Whole genome shotgun sequence of line P...    87   1e-15
D7T601_VITVI (tr|D7T601) Whole genome shotgun sequence of line P...    87   2e-15
Q941E0_ARATH (tr|Q941E0) AT3g01160/T4P13_15 OS=Arabidopsis thali...    70   2e-10
Q9MAC6_ARATH (tr|Q9MAC6) T4P13.15 protein OS=Arabidopsis thalian...    70   3e-10
A9TP42_PHYPA (tr|A9TP42) Predicted protein OS=Physcomitrella pat...    69   6e-10
D7LAI6_ARALY (tr|D7LAI6) Putative uncharacterized protein OS=Ara...    66   4e-09
A8I029_CHLRE (tr|A8I029) Predicted protein OS=Chlamydomonas rein...    60   2e-07
C1ECS6_9CHLO (tr|C1ECS6) Predicted protein OS=Micromonas sp. RCC...    59   3e-07
C5XA68_SORBI (tr|C5XA68) Putative uncharacterized protein Sb02g0...    58   1e-06
A9UNJ9_MONBE (tr|A9UNJ9) Predicted protein OS=Monosiga brevicoll...    57   2e-06
A2YM41_ORYSI (tr|A2YM41) Putative uncharacterized protein OS=Ory...    55   7e-06

>B9T718_RICCO (tr|B9T718) Pre-rRNA-processing protein ESF1, putative OS=Ricinus
           communis GN=RCOM_0310730 PE=4 SV=1
          Length = 722

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 53/66 (80%)

Query: 40  RKVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNK 99
           R+++ DPRF S+H DPRFQKV   ++KV IDSRFSRMFTDK+F SS+APLD RGK KK  
Sbjct: 39  RELMEDPRFASIHTDPRFQKVPKQRTKVEIDSRFSRMFTDKSFGSSSAPLDSRGKAKKQN 98

Query: 100 TENALR 105
           +E+ LR
Sbjct: 99  SESFLR 104


>D7UEG0_VITVI (tr|D7UEG0) Whole genome shotgun sequence of line PN40024,
           scaffold_1987.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00005594001 PE=4 SV=1
          Length = 193

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 41  KVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKT 100
           K++ D RF S+H DPRFQKV   K+KV IDSRF+RMF DK+F SS+APLDKRGK KK+++
Sbjct: 27  KIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLDKRGKPKKDRS 86

Query: 101 ENAL 104
            N L
Sbjct: 87  GNTL 90


>D7T5Q5_VITVI (tr|D7T5Q5) Whole genome shotgun sequence of line PN40024,
           scaffold_510.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00007226001 PE=4 SV=1
          Length = 738

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 41  KVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKT 100
           K++ D RF S+H DPRFQKV   K+KV IDSRF+RMF DK+F SS+APLDKRGK KK+++
Sbjct: 35  KIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLDKRGKPKKDRS 94

Query: 101 ENAL 104
            N L
Sbjct: 95  GNTL 98


>D7T601_VITVI (tr|D7T601) Whole genome shotgun sequence of line PN40024,
           scaffold_1677.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00005388001 PE=4 SV=1
          Length = 155

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 41  KVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKT 100
           K++ D RF S+H DPRFQKV   K+KV IDSRF+RMF DK+F SS+APLDKRGK KK+++
Sbjct: 70  KIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLDKRGKPKKDRS 129

Query: 101 ENAL 104
            N L
Sbjct: 130 GNTL 133


>Q941E0_ARATH (tr|Q941E0) AT3g01160/T4P13_15 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 298

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%)

Query: 41  KVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKT 100
           ++I DPRF S H DP+F+++    SKVAIDSRF  MF DK F + +AP+DKRGK +   T
Sbjct: 29  EMIKDPRFSSAHTDPKFRRMRRRDSKVAIDSRFQPMFNDKRFATGSAPVDKRGKRRTGGT 88


>Q9MAC6_ARATH (tr|Q9MAC6) T4P13.15 protein OS=Arabidopsis thaliana GN=At3g01160
           PE=1 SV=1
          Length = 713

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%)

Query: 41  KVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKT 100
           ++I DPRF S H DP+F+++    SKVAIDSRF  MF DK F + +AP+DKRGK +   T
Sbjct: 29  EMIKDPRFSSAHTDPKFRRMRRRDSKVAIDSRFQPMFNDKRFATGSAPVDKRGKRRTGGT 88


>A9TP42_PHYPA (tr|A9TP42) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_171154 PE=4 SV=1
          Length = 619

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 42  VIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKTE 101
            I+DPRF  VH DPRF ++   K+KV+ID RFS MF+DKNF S     DKRG+ KK K +
Sbjct: 15  TISDPRFARVHTDPRFMRMPTNKTKVSIDKRFSHMFSDKNF-SDPLGADKRGRAKKKKEK 73

Query: 102 NALR 105
           + L+
Sbjct: 74  HMLQ 77


>D7LAI6_ARALY (tr|D7LAI6) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_317076 PE=4 SV=1
          Length = 725

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 38/50 (76%)

Query: 41 KVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLD 90
          ++I DPRF S H DP+F+++    SKVAIDSRF RMF DK F +++AP+D
Sbjct: 28 EMIKDPRFSSAHTDPKFRRIRRRDSKVAIDSRFQRMFNDKRFTTASAPVD 77


>A8I029_CHLRE (tr|A8I029) Predicted protein OS=Chlamydomonas reinhardtii
           GN=CHLREDRAFT_143005 PE=4 SV=1
          Length = 1059

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)

Query: 45  DPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKTEN 102
           DPRF ++H DPRFQ+    K+KV +D RF+ MF D  FQ+ +A +DKRG+  ++K  N
Sbjct: 13  DPRFAAMHSDPRFQRFPKQKNKVVVDKRFAGMFEDPEFQARSA-VDKRGRKIEDKKRN 69


>C1ECS6_9CHLO (tr|C1ECS6) Predicted protein OS=Micromonas sp. RCC299
           GN=MICPUN_61525 PE=4 SV=1
          Length = 914

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 43  IADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSS--AAPLDKRGK--VKKN 98
           I+DPRF + H DPRF +     +K  ID RF +MF+D NF +   AA  DKRG+  VK N
Sbjct: 49  ISDPRFRAAHSDPRFMRFPTAATKTKIDKRFQKMFSDPNFGTGGPAAGRDKRGRKSVKAN 108

Query: 99  KT 100
           KT
Sbjct: 109 KT 110


>C5XA68_SORBI (tr|C5XA68) Putative uncharacterized protein Sb02g035270 OS=Sorghum
           bicolor GN=Sb02g035270 PE=4 SV=1
          Length = 777

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 35/51 (68%)

Query: 40  RKVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLD 90
           R+ + D RF +   DPRF+ +   ++KVA+DSRFS M TD  F SSAAP+D
Sbjct: 91  RRAMEDERFAAARTDPRFRPMRRKEAKVALDSRFSSMMTDPRFASSAAPVD 141


>A9UNJ9_MONBE (tr|A9UNJ9) Predicted protein OS=Monosiga brevicollis GN=31074 PE=4
           SV=1
          Length = 744

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 42  VIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLDKRGKVKKNKTE 101
           +I D RF   H DPRF++ S  + KV ID RF  MFTDK FQ +AA +D RG+   +  +
Sbjct: 34  MIEDARFAHAHNDPRFKRPSKRQQKVVIDDRFKSMFTDKRFQ-TAAKVDARGRKITHSQD 92

Query: 102 NALR 105
             LR
Sbjct: 93  EDLR 96


>A2YM41_ORYSI (tr|A2YM41) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_26294 PE=4 SV=1
          Length = 759

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 40  RKVIADPRFVSVHYDPRFQKVSMLKSKVAIDSRFSRMFTDKNFQSSAAPLD 90
           R+ + D RF +   DPRF+ +   ++KV +DSRFS M TD  F SS+AP+D
Sbjct: 91  RRAMEDERFAAARTDPRFRAMRRKEAKVELDSRFSSMLTDPRFSSSSAPVD 141