Jatropha Genome Database

JcCA0316161.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316161.20 - phase: 0 
         (204 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9H5H3_POPTR (tr|B9H5H3) Predicted protein OS=Populus trichocarp...   230   8e-59
B9R8M7_RICCO (tr|B9R8M7) Putative uncharacterized protein OS=Ric...   226   8e-58
B9GQ14_POPTR (tr|B9GQ14) Predicted protein OS=Populus trichocarp...   219   2e-55
C6TBL8_SOYBN (tr|C6TBL8) Putative uncharacterized protein OS=Gly...   157   7e-37
C6SXS5_SOYBN (tr|C6SXS5) Putative uncharacterized protein OS=Gly...   153   1e-35
Q6GKX1_ARATH (tr|Q6GKX1) At5g42330 OS=Arabidopsis thaliana GN=At...   117   9e-25
D7MTF7_ARALY (tr|D7MTF7) Putative uncharacterized protein OS=Ara...   111   4e-23
Q9FII4_ARATH (tr|Q9FII4) Genomic DNA, chromosome 5, P1 clone:MDH...    82   3e-14

>B9H5H3_POPTR (tr|B9H5H3) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_652202 PE=4 SV=1
          Length = 208

 Score =  230 bits (586), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 122/205 (59%), Positives = 144/205 (70%), Gaps = 1/205 (0%)

Query: 1   MKSDRRPPLAKSPIRLRPRRVLQXXXXXVQTPPGSLTKSQKPNLTREMEESDLRSENHTM 60
           M++DR+PPLAKSPIR+RPRRVL+     +QTPPGSLTKSQKPN   + E+SDLR E H++
Sbjct: 4   MRTDRKPPLAKSPIRIRPRRVLRSESTTLQTPPGSLTKSQKPNRKLDTEDSDLRPEYHSI 63

Query: 61  SCELRALARMVQDELGNAXXXXXXXXXXXXXXXXPLFERGRFYEVYSARRNXXXXXXXXX 120
           SCELRALA+MV+DE GN                 PLFERGRFYE YSARRN         
Sbjct: 64  SCELRALAKMVRDEFGNGESTNGGVGKSLSANSSPLFERGRFYEEYSARRNDRLKRKKGD 123

Query: 121 XXXXXXXPYHLGVTVESSKKRDSKKLESLRKSVSAAYSVERSANPRYSLRSLSKENKKPP 180
                  PY+LGVTVESSK+R ++KLES RKSVS A  VER+  PRY LRS++KENKKPP
Sbjct: 124 TGDDMKTPYNLGVTVESSKRRYTRKLESARKSVSDACLVERNETPRYLLRSMNKENKKPP 183

Query: 181 LP-FNVEKSVCPSERKVGTRRVRKI 204
           LP ++ EKSV   ERKV  R+VRKI
Sbjct: 184 LPVYSFEKSVLAGERKVAARKVRKI 208


>B9R8M7_RICCO (tr|B9R8M7) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1600960 PE=4 SV=1
          Length = 206

 Score =  226 bits (577), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/206 (61%), Positives = 143/206 (69%), Gaps = 2/206 (0%)

Query: 1   MKSDRRPPLAKSPIRLRPRRVLQXXXXX-VQTPPGSLTKSQKPNLTREMEESDLRSENHT 59
           MK DR+PPLAKSPIR+RP RVL+      +Q+PPGSL KSQK N   +MEE DLR E  +
Sbjct: 1   MKYDRKPPLAKSPIRVRPGRVLRSTTTTSLQSPPGSLIKSQKLNPGPDMEELDLRPEYRS 60

Query: 60  MSCELRALARMVQDELGNAXXXXXXXXXXXXXXXXPLFERGRFYEVYSARRNXX-XXXXX 118
           +S ELRALARMVQDE G                  PLFERGRFY+VYSARRN        
Sbjct: 61  ISWELRALARMVQDEFGKENATNAGERKSLSANSSPLFERGRFYDVYSARRNERLKRKTG 120

Query: 119 XXXXXXXXXPYHLGVTVESSKKRDSKKLESLRKSVSAAYSVERSANPRYSLRSLSKENKK 178
                    P++LGV +ESSKKRD+KKL+SLRKSVSAAYSVE S  PRYSLRSLSKENKK
Sbjct: 121 ETGEEGVKTPHNLGVNIESSKKRDTKKLQSLRKSVSAAYSVESSEIPRYSLRSLSKENKK 180

Query: 179 PPLPFNVEKSVCPSERKVGTRRVRKI 204
           PPLP N EKSV  +E+KVG RRVRK+
Sbjct: 181 PPLPVNYEKSVLANEKKVGARRVRKV 206


>B9GQ14_POPTR (tr|B9GQ14) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_830000 PE=4 SV=1
          Length = 208

 Score =  219 bits (557), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/205 (58%), Positives = 137/205 (66%), Gaps = 1/205 (0%)

Query: 1   MKSDRRPPLAKSPIRLRPRRVLQXXXXXVQTPPGSLTKSQKPNLTREMEESDLRSENHTM 60
           MK+  +PPLAKSP RLRPRR ++      QTPPGSL KSQ+PN   +MEESDLR E  ++
Sbjct: 4   MKTVGKPPLAKSPTRLRPRRSIRSESTTSQTPPGSLAKSQRPNRKWDMEESDLRPEYQSI 63

Query: 61  SCELRALARMVQDELGNAXXXXXXXXXXXXXXXXPLFERGRFYEVYSARRNXXXXXXXXX 120
           S ELRALA+M + E GN                 PLFERGRFYE YS RRN         
Sbjct: 64  SWELRALAKMARGEFGNGESSNGGVGRSLSANSSPLFERGRFYEEYSVRRNERLKRKKGD 123

Query: 121 XXXXXXXPYHLGVTVESSKKRDSKKLESLRKSVSAAYSVERSANPRYSLRSLSKENKKPP 180
                  P +LGVT+ESSK+RDSKKLESLRKSVSAAY VER+ N RY LRS++KENKKPP
Sbjct: 124 TGNEVKTPCNLGVTIESSKRRDSKKLESLRKSVSAAYCVERNENSRYMLRSMNKENKKPP 183

Query: 181 LP-FNVEKSVCPSERKVGTRRVRKI 204
           LP +N EKSV  SERKV  R+ RKI
Sbjct: 184 LPVYNYEKSVLASERKVTARKARKI 208


>C6TBL8_SOYBN (tr|C6TBL8) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 204

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 123/209 (58%), Gaps = 16/209 (7%)

Query: 1   MKSDRRPPLAKSPIRLRPRRVLQXXXX-XVQTPPGSLTKSQKPNLTREMEESDLRSENHT 59
           MKS  +PPL +SPIRLRP   +       +QTPPGSLTKSQKP ++      ++R E  T
Sbjct: 7   MKSMYKPPLPRSPIRLRPSHAVHSSNSIALQTPPGSLTKSQKPVIS-----PNMRPEYRT 61

Query: 60  MSCELRALARMVQDELGNAXXXXXXXXXXXXXXXXPLFERGRFYEVYSARRNX--XXXXX 117
           +SCELRAL +MV+DE   A                 LFERGRFY+ YSARRN        
Sbjct: 62  ISCELRALTKMVRDEFSKANSEKAASANSSV-----LFERGRFYDEYSARRNERLMRKKG 116

Query: 118 XXXXXXXXXXPYH-LGVTVESSKKRDS-KKLESLRKSVSAAYSVERSANPRYSLRSLSKE 175
                     P H LGVT+ES KK  S +K+ +LRKS+ AAYS   S  PRY LRS++KE
Sbjct: 117 VTAVDEGKAKPVHSLGVTMESGKKSSSVRKMGTLRKSIFAAYSSGVSETPRYMLRSMTKE 176

Query: 176 NKKPPLPFNVEKSVCPSERKVGTRRVRKI 204
           NKKPPL    +KSV   ++K+GT R RKI
Sbjct: 177 NKKPPLAAKFDKSVVAGDKKMGT-RARKI 204


>C6SXS5_SOYBN (tr|C6SXS5) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 202

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/208 (46%), Positives = 118/208 (56%), Gaps = 16/208 (7%)

Query: 1   MKSDRRPPLAKSPIRLRPRRV-LQXXXXXVQTPPGSLTKSQKPNLTREMEESDLRSENHT 59
           +KS  +PPL +SPIRLRP           +QTPPGSLTKSQKP L+      ++R E  T
Sbjct: 7   IKSVYKPPLPRSPIRLRPSHAAYSSNSIALQTPPGSLTKSQKPVLSL-----NIRPEYRT 61

Query: 60  MSCELRALARMVQDELGNAXXXXXXXXXXXXXXXXPLFERGRFYEVYSARRNXXXXXXXX 119
           +SCEL AL +MV+DE                     LFERGRFY+ YSARRN        
Sbjct: 62  ISCELWALTKMVRDEFSKVNSEKAATNSSV------LFERGRFYDEYSARRNERLMRKKG 115

Query: 120 XXXXXXXXPY---HLGVTVESSKKRDSKKLESLRKSVSAAYSVERSANPRYSLRSLSKEN 176
                         LGVT+ES KK   +K+ +LRKS+SAAYS   S  PRY LRS++KEN
Sbjct: 116 VTAVDEGKAKPVRSLGVTMESGKKTSVRKMGTLRKSISAAYSSGVSGTPRYMLRSMTKEN 175

Query: 177 KKPPLPFNVEKSVCPSERKVGTRRVRKI 204
           KKPPL    +KSV   E+K+GTR  RKI
Sbjct: 176 KKPPLAAKFDKSVVAGEKKMGTRG-RKI 202


>Q6GKX1_ARATH (tr|Q6GKX1) At5g42330 OS=Arabidopsis thaliana GN=At5g42330 PE=2
           SV=1
          Length = 205

 Score =  117 bits (292), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 119/216 (55%), Gaps = 26/216 (12%)

Query: 1   MKSDRRPPLAKSPIRLRPRRVLQXXXXXVQTP-PGSLTKSQKPNLTREMEESDL----RS 55
           M+S  +PPL KSPIRLR R+VL      +QTP PG L    KP   R + + DL    + 
Sbjct: 4   MRSYLKPPLPKSPIRLRSRQVLHSS---LQTPSPGFL----KPG--RRLSDVDLNPKPQI 54

Query: 56  ENHTMSCELRALARMVQDELGNAXX-XXXXXXXXXXXXXXPLFERGRFYEVYSARRNX-- 112
           +  ++S E+ ALA+MV+DE                     PLFERGRFYE YSA+RN   
Sbjct: 55  KYSSISSEIHALAKMVKDEFAEEEDRKKSSNLESLAKNSVPLFERGRFYEEYSAKRNERL 114

Query: 113 --XXXXXXXXXXXXXXXPYHLGVTVE--SSKKRDSKKLESLRKSVSAAYSVERSANPRYS 168
                            PY+LGV  E  ++K+R + K ES++K+V +   VE S+ PRYS
Sbjct: 115 RRKKGEEAVEGGVVKGTPYNLGVNHEPMTNKRRGTAKKESIKKTVVSM--VESSSIPRYS 172

Query: 169 LRSLSKENKKPPLPFNVEKSVCPSERKVGTRRVRKI 204
           LRS++KEN+KPPLP NV  S   S   V TR+ R+I
Sbjct: 173 LRSMAKENRKPPLPLNVAVSAMKS---VTTRKGRRI 205


>D7MTF7_ARALY (tr|D7MTF7) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_494800 PE=4 SV=1
          Length = 204

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 114/215 (53%), Gaps = 25/215 (11%)

Query: 1   MKSDRRPPLAKSPIRLRPRRVLQXXXXXVQTPPGSLTKSQKPNLTREMEESDL----RSE 56
           M+S  +PPL KSPIRLR R+VL      +QTP     K       R + + DL    + E
Sbjct: 4   MRSYLKPPLPKSPIRLRSRQVLHSS---LQTPSPVFLKP-----GRRLSDVDLNPKPQFE 55

Query: 57  NHTMSCELRALARMVQDELGNAXX-XXXXXXXXXXXXXXPLFERGRFYEVYSARRNX--- 112
             ++S E+ ALA+MV+DE                     P+FERGRFYE YSA+RN    
Sbjct: 56  YSSISSEIHALAKMVKDEFAEEENRKKSSNLESLATNSVPVFERGRFYEEYSAKRNERLR 115

Query: 113 -XXXXXXXXXXXXXXXPYHLGVTVE--SSKKRDSKKLESLRKSVSAAYSVERSANPRYSL 169
                           PY+LGV  E  ++K+R + K ES++K+V    S+  ++ PRYSL
Sbjct: 116 RKKGEEAVEGGVVKGTPYNLGVNHEPMTNKRRGTAKKESIKKTV---VSMVETSIPRYSL 172

Query: 170 RSLSKENKKPPLPFNVEKSVCPSERKVGTRRVRKI 204
           RS+SKEN+KPP+P NV  S     + V TRR R+I
Sbjct: 173 RSMSKENRKPPIPLNVAVSAM---KTVTTRRGRRI 204


>Q9FII4_ARATH (tr|Q9FII4) Genomic DNA, chromosome 5, P1 clone:MDH9 OS=Arabidopsis
           thaliana PE=4 SV=1
          Length = 177

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 8/104 (7%)

Query: 95  PLFERGRFYEVYSARRNX----XXXXXXXXXXXXXXXPYHLGVTVE--SSKKRDSKKLES 148
           PLFERGRFYE YSA+RN                    PY+LGV  E  ++K+R + K ES
Sbjct: 27  PLFERGRFYEEYSAKRNERLRRKKGEEAVEGGVVKGTPYNLGVNHEPMTNKRRGTAKKES 86

Query: 149 LRKSVSAAYSVERSANPRYSLRSLSKENKKPPLPFNVEKSVCPS 192
           ++K+V +   VE S+ PRYSLRS++KEN+KPPLP NV  S   S
Sbjct: 87  IKKTVVSM--VESSSIPRYSLRSMAKENRKPPLPLNVAVSAMKS 128