Jatropha Genome Database
- JcCA0315371.20
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0315371.20 - phase: 0 /partial
(175 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RNR5_RICCO (tr|B9RNR5) Protein ABC1, mitochondrial, putative O... 250 3e-65
B9ILA8_POPTR (tr|B9ILA8) Predicted protein (Fragment) OS=Populus... 236 7e-61
D7SV84_VITVI (tr|D7SV84) Whole genome shotgun sequence of line P... 214 3e-54
D7M3T5_ARALY (tr|D7M3T5) ABC1 family protein OS=Arabidopsis lyra... 165 2e-39
B8B5R5_ORYSI (tr|B8B5R5) Putative uncharacterized protein OS=Ory... 162 9e-39
Q7EY94_ORYSJ (tr|Q7EY94) Putative ubiquinone biosynthesis protei... 162 1e-38
Q84W22_ARATH (tr|Q84W22) Putative uncharacterized protein At5g24... 162 1e-38
C5X577_SORBI (tr|C5X577) Putative uncharacterized protein Sb02g0... 140 5e-32
B6SXV9_MAIZE (tr|B6SXV9) Ubiquinone biosynthesis protein ubiB OS... 138 2e-31
A9T5A5_PHYPA (tr|A9T5A5) Predicted protein OS=Physcomitrella pat... 71 5e-11
>B9RNR5_RICCO (tr|B9RNR5) Protein ABC1, mitochondrial, putative OS=Ricinus
communis GN=RCOM_0920180 PE=4 SV=1
Length = 732
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/174 (69%), Positives = 143/174 (82%)
Query: 1 VAAISEQASESTGEAAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLV 60
+ AISEQASESTGEA KSEE+ ++ WKSFD+R+VV ATEDLLLFILSEKG RVRVFL+
Sbjct: 554 ILAISEQASESTGEAPKSEEDLTNPFGWKSFDMRSVVGATEDLLLFILSEKGWRVRVFLI 613
Query: 61 RDIIKVADVFLRDKIVGCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWT 120
RD+IKV D FL D++VGCI D+K E +EASKSE HS MRVV+GFQYLRQAVKLAPE+WT
Sbjct: 614 RDLIKVVDAFLEDEVVGCISDEKYEASEASKSESHSMVMRVVDGFQYLRQAVKLAPEMWT 673
Query: 121 AMLIRMALKPEFHSFILDIMSALVVHFNHKVPETSWVFMSRLLHKLVRNDRLDD 174
MLIR+ LKPE +F LDI+SAL +H +HK+PE W MS++LHKL RN R DD
Sbjct: 674 VMLIRLTLKPESRAFTLDIISALTLHLSHKLPENFWNSMSKILHKLERNYRFDD 727
>B9ILA8_POPTR (tr|B9ILA8) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_911794 PE=4 SV=1
Length = 657
Score = 236 bits (602), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 140/173 (80%), Gaps = 2/173 (1%)
Query: 3 AISEQASESTGEAAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLVRD 62
AISEQAS+ST E+ SE N SD L WKSFD+R+VV+ATEDLLLFILSEKG RVRVFL+RD
Sbjct: 487 AISEQASDSTEESPDSEGNSSDPLGWKSFDMRSVVNATEDLLLFILSEKGGRVRVFLLRD 546
Query: 63 IIKVADVFLRDKIVGCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWTAM 122
+IK ADVFL+D+ +L++K E EAS SE ++T RV GF YLRQAVKLAPELWTAM
Sbjct: 547 VIKAADVFLQDE--AGVLNEKPEAREASDSEVNATHTRVAKGFHYLRQAVKLAPELWTAM 604
Query: 123 LIRMALKPEFHSFILDIMSALVVHFNHKVPETSWVFMSRLLHKLVRNDRLDDL 175
LIRMALKPE H F DI+SAL++HF+HK+PET W+ MSR LHKLVRN D+L
Sbjct: 605 LIRMALKPEVHRFSFDIISALIMHFSHKLPETFWICMSRHLHKLVRNHTSDEL 657
>D7SV84_VITVI (tr|D7SV84) Whole genome shotgun sequence of line PN40024,
scaffold_8.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00036033001 PE=4 SV=1
Length = 771
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 124/162 (76%)
Query: 1 VAAISEQASESTGEAAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLV 60
+AA+SEQASES E ++ N S LEWKSFD+RAVV+ATEDL FILS KG RVRVFL+
Sbjct: 579 IAAVSEQASESAEEPPDTKGNSSSPLEWKSFDMRAVVAATEDLFQFILSRKGLRVRVFLI 638
Query: 61 RDIIKVADVFLRDKIVGCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWT 120
RDII D+FL+D++V CI +K S+SEG + RV+NGFQYL+QA+ LAPE+WT
Sbjct: 639 RDIISATDIFLQDEVVACIFYEKLGAKAPSESEGDAVLTRVINGFQYLKQAINLAPEVWT 698
Query: 121 AMLIRMALKPEFHSFILDIMSALVVHFNHKVPETSWVFMSRL 162
MLIRM+LKPE HSF+LDI+SAL +HF HK+PET W + + L
Sbjct: 699 GMLIRMSLKPEVHSFMLDIISALAIHFRHKIPETFWAWNAYL 740
>D7M3T5_ARALY (tr|D7M3T5) ABC1 family protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_489356 PE=4 SV=1
Length = 718
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 118/166 (71%), Gaps = 12/166 (7%)
Query: 1 VAAISEQASESTGEAAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLV 60
VAAISEQAS ++G++ + ++ + E KSFD+ +VVSATEDLLLFILSEKG RVRVFL+
Sbjct: 558 VAAISEQASATSGDS-REDKTLKKSSELKSFDMHSVVSATEDLLLFILSEKGQRVRVFLL 616
Query: 61 RDIIKVADVFLRDKIV--GCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPEL 118
+DII++ D+FL + + ++ KRE EG T RV NGF+ L +AVKLAP +
Sbjct: 617 QDIIRMVDIFLEEAALDLNTTINLKRE-------EG--TMKRVSNGFKCLNEAVKLAPGM 667
Query: 119 WTAMLIRMALKPEFHSFILDIMSALVVHFNHKVPETSWVFMSRLLH 164
W +ML+RM+ K E HS+ LDI+SAL HF HKVP T W+ S+LLH
Sbjct: 668 WISMLLRMSRKSEVHSYALDIVSALSTHFGHKVPHTCWILFSKLLH 713
>B8B5R5_ORYSI (tr|B8B5R5) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_25885 PE=4 SV=1
Length = 721
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Query: 1 VAAISEQASESTGEAAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLV 60
+AAISEQ+ S +S EN ++ W+SFD+ +VV+ATEDL FILS KG RVRVFLV
Sbjct: 552 IAAISEQSESSNKSEDRSGENAANKPGWRSFDMHSVVAATEDLFHFILSRKGWRVRVFLV 611
Query: 61 RDIIKVADVFLRDKIVGCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWT 120
+DI+K +D FL++ I D++ E E RVV+G Q RQA+ LAP+ WT
Sbjct: 612 QDIVKASDAFLQEATFPGIFDEEGTTGEL-HPERSKMIRRVVHGVQSFRQAISLAPDAWT 670
Query: 121 AMLIRMALKPEFHSFILDIMSALVVHFNHKVPETSWVFMSRLLHKLVRNDR 171
AML R LKPE FILD+ AL +H +K+PETSW+ MSR L+ L R R
Sbjct: 671 AMLFRTLLKPESQKFILDVFLALAMHSCYKIPETSWICMSRFLNYLDRQGR 721
>Q7EY94_ORYSJ (tr|Q7EY94) Putative ubiquinone biosynthesis protein ubiB OS=Oryza
sativa subsp. japonica GN=OSJNBa0040K22.112-1 PE=4 SV=1
Length = 722
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Query: 1 VAAISEQASESTGEAAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLV 60
+AAISEQ+ S +S EN ++ W+SFD+ +VV+ATEDL FILS KG RVRVFLV
Sbjct: 553 IAAISEQSESSNKSEDRSGENAANKPGWRSFDMHSVVAATEDLFHFILSRKGWRVRVFLV 612
Query: 61 RDIIKVADVFLRDKIVGCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWT 120
+DI+K +D FL++ I D++ E E RVV+G Q RQA+ LAP+ WT
Sbjct: 613 QDIVKASDAFLQEATFPGIFDEEGTTGEL-HPERSKMIRRVVHGVQSFRQAISLAPDAWT 671
Query: 121 AMLIRMALKPEFHSFILDIMSALVVHFNHKVPETSWVFMSRLLHKLVRNDR 171
AML R LKPE FILD+ AL +H +K+PETSW+ MSR L+ L R R
Sbjct: 672 AMLFRTLLKPESQKFILDVFLALAMHSCYKIPETSWICMSRFLNYLDRQGR 722
>Q84W22_ARATH (tr|Q84W22) Putative uncharacterized protein At5g24970
OS=Arabidopsis thaliana GN=At5g24970 PE=2 SV=1
Length = 719
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 119/164 (72%), Gaps = 8/164 (4%)
Query: 1 VAAISEQASESTGEAAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLV 60
VAAISEQAS ++G++ + ++ + E KSFD+ +VVSATEDLLLFILSEKG RVRVFL+
Sbjct: 559 VAAISEQASATSGDSPE-DKTLKKSSELKSFDMHSVVSATEDLLLFILSEKGQRVRVFLL 617
Query: 61 RDIIKVADVFLRDKIVGCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWT 120
+DII+V D+FL + L+ + N ++ EG T RV NGF+ L +AVKLAP +W
Sbjct: 618 QDIIRVVDIFLEVEA----LELNKTINLKTE-EG--TMKRVSNGFKGLSEAVKLAPGMWI 670
Query: 121 AMLIRMALKPEFHSFILDIMSALVVHFNHKVPETSWVFMSRLLH 164
+ML+RM+ K E HS+ LDI+SAL HF HKVP T W+ +S+LLH
Sbjct: 671 SMLLRMSRKSEVHSYALDIVSALSTHFGHKVPHTCWILLSKLLH 714
>C5X577_SORBI (tr|C5X577) Putative uncharacterized protein Sb02g011010 OS=Sorghum
bicolor GN=Sb02g011010 PE=4 SV=1
Length = 250
Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Query: 15 AAKSEENPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLVRDIIKVADVFLRDK 74
A S EN + + EW+SFD+ +V++ATEDL FILS KG RVRVFLV+DI+K +DVFL++
Sbjct: 94 GADSSENANGSPEWRSFDMHSVIAATEDLFDFILSRKGWRVRVFLVQDIVKASDVFLQEA 153
Query: 75 IVGCILDQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWTAMLIRMALKPEFHS 134
I D + + + E R+VN Q RQA+ LAP+ W+AMLIR LK E
Sbjct: 154 TFPYIFDNVGKIGDINP-ERSKMIRRLVNTVQSFRQAISLAPDAWSAMLIRTLLKHEAQK 212
Query: 135 FILDIMSALVVHFNHKVPETSWVFMSRLLHKLVRND 170
F+LD+ L H ++K+PET W+ MSR L+ L + D
Sbjct: 213 FVLDVFLTLASHSSYKIPETFWLCMSRFLNYLDKQD 248
>B6SXV9_MAIZE (tr|B6SXV9) Ubiquinone biosynthesis protein ubiB OS=Zea mays PE=2
SV=1
Length = 717
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 21 NPSDTLEWKSFDIRAVVSATEDLLLFILSEKGSRVRVFLVRDIIKVADVFLRDKIVGCIL 80
N + + EW+SFD+ +V++ATEDL FILS KG RVRVFLV+DI+ +DVFL++ +
Sbjct: 567 NANGSPEWRSFDMHSVIAATEDLFDFILSRKGWRVRVFLVQDIVNASDVFLQEATFPYVY 626
Query: 81 DQKREGNEASKSEGHSTFMRVVNGFQYLRQAVKLAPELWTAMLIRMALKPEFHSFILDIM 140
+ + + + E R+VN Q RQA+ LAP+ W+AMLIR LKPE F+LD+
Sbjct: 627 AKVGKIGDLNP-ERSKMIRRLVNTVQSFRQAINLAPDAWSAMLIRTLLKPESQKFVLDVF 685
Query: 141 SALVVHFNHKVPETSWVFMSRLLHKLVRNDRL 172
AL H ++K+PET W+FMSR L+ L + D L
Sbjct: 686 LALANHSSYKIPETFWLFMSRFLNYLDKQDIL 717
>A9T5A5_PHYPA (tr|A9T5A5) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_191752 PE=4 SV=1
Length = 633
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Query: 30 SFDIRAVVSATEDLLLFILSEKGSRVRVFLVRDIIKVADVFLRDKIVGCILDQKREGNEA 89
+FD RAV SAT D++ FILS +GSRVRV LV+DI++ L+ LD + +
Sbjct: 498 AFDSRAVASATLDVMNFILSGEGSRVRVLLVKDIVRTFSANLKH----YYLDSMKLEKDP 553
Query: 90 SKSEGHSTFMRVVNGFQYLRQAVKLAPELWTAMLIRMALKPEFHSFILDIMSALVVHFNH 149
+ + RV G +AV+ PE+W ++ ++ KPE + ++ +AL + +
Sbjct: 554 VCMQLDNFPGRVEAGLLAFVKAVEANPEVWIPLMAQLGAKPEARALGCEVTNALAESYCN 613
Query: 150 KVPETSWVFMSRLLHK 165
+ E ++++S+ LH+
Sbjct: 614 ETAEAFFLYISKQLHE 629