Jatropha Genome Database

JcCA0314681.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314681.10 - phase: 0 
         (187 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SEP9_RICCO (tr|B9SEP9) Putative uncharacterized protein OS=Ric...   286   8e-76
B9N5G0_POPTR (tr|B9N5G0) Predicted protein OS=Populus trichocarp...   260   5e-68
D7TBZ1_VITVI (tr|D7TBZ1) Whole genome shotgun sequence of line P...   247   4e-64
D7LZF3_ARALY (tr|D7LZF3) Putative uncharacterized protein OS=Ara...   230   4e-59
Q84VV3_ARATH (tr|Q84VV3) At5g20120 OS=Arabidopsis thaliana GN=At...   226   6e-58
A5BHH3_VITVI (tr|A5BHH3) Putative uncharacterized protein OS=Vit...   130   5e-29
A9T2C9_PHYPA (tr|A9T2C9) Predicted protein (Fragment) OS=Physcom...   106   1e-21
A9S931_PHYPA (tr|A9S931) Predicted protein (Fragment) OS=Physcom...    91   6e-17
D5AB07_PICSI (tr|D5AB07) Putative uncharacterized protein OS=Pic...    62   3e-08
A0D8K6_PARTE (tr|A0D8K6) Chromosome undetermined scaffold_41, wh...    55   4e-06

>B9SEP9_RICCO (tr|B9SEP9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0221850 PE=4 SV=1
          Length = 187

 Score =  286 bits (731), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 149/187 (79%)

Query: 1   MSGGSPVGGGYMRQRHSQGYASGGDDLEDDACXXXXXXXXXXXXXXXWVEIVENVLWIAS 60
           MSGGSPVGGGYMRQRHSQGYASGGDDLEDDAC               WVEIVENVLWIAS
Sbjct: 1   MSGGSPVGGGYMRQRHSQGYASGGDDLEDDACSRPQPFSTPSPRVRSWVEIVENVLWIAS 60

Query: 61  AIFIVYFGDRHSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTSMFTWGVRRFDEKW 120
           AIFIVYFGDRH NLIYLLWHD RIRRLPLYLGM+G G+N+VIF YTS+F W VRRFDEKW
Sbjct: 61  AIFIVYFGDRHCNLIYLLWHDGRIRRLPLYLGMIGVGLNVVIFFYTSVFAWSVRRFDEKW 120

Query: 121 ELSSISALPLVTLLGLVSFCLLSFALWPVWSXXXXXXXXXXXMASMVICPHIMIVTFRQQ 180
           ELSSISALPLVTLLGLVSF L SFALWP+WS           MA MVI PHIMI TF+Q 
Sbjct: 121 ELSSISALPLVTLLGLVSFSLFSFALWPIWSFLTLPLLFTLFMACMVIFPHIMIGTFKQP 180

Query: 181 NDTFRID 187
           NDTFRID
Sbjct: 181 NDTFRID 187


>B9N5G0_POPTR (tr|B9N5G0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_582944 PE=4 SV=1
          Length = 188

 Score =  260 bits (664), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 128/177 (72%), Positives = 138/177 (77%)

Query: 11  YMRQRHSQGYASGGDDLEDDACXXXXXXXXXXXXXXXWVEIVENVLWIASAIFIVYFGDR 70
           Y+RQRHSQGYAS GDDLEDDAC               W+EIVENV+WIASAIFI+YFGDR
Sbjct: 12  YIRQRHSQGYASSGDDLEDDACSRAQPFSPPNQRVRPWLEIVENVIWIASAIFIIYFGDR 71

Query: 71  HSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTSMFTWGVRRFDEKWELSSISALPL 130
            SNLIYLLWHDERIRRLPLYLGMVG G+N++IFLYT MF W VRRFDEKWELSSIS LPL
Sbjct: 72  RSNLIYLLWHDERIRRLPLYLGMVGVGLNILIFLYTIMFAWSVRRFDEKWELSSISTLPL 131

Query: 131 VTLLGLVSFCLLSFALWPVWSXXXXXXXXXXXMASMVICPHIMIVTFRQQNDTFRID 187
           VTLLGLVSFCL SF+LWP+WS           MA MVI P+IMI TFR QND FRID
Sbjct: 132 VTLLGLVSFCLFSFSLWPIWSFLTLPLLFTLFMACMVIFPNIMIGTFRTQNDAFRID 188


>D7TBZ1_VITVI (tr|D7TBZ1) Whole genome shotgun sequence of line PN40024,
           scaffold_16.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00015511001 PE=4 SV=1
          Length = 187

 Score =  247 bits (630), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 137/187 (73%)

Query: 1   MSGGSPVGGGYMRQRHSQGYASGGDDLEDDACXXXXXXXXXXXXXXXWVEIVENVLWIAS 60
           MSGG+PVGGG+MRQRHSQGYAS GDDLEDDAC               W E++EN+LWIAS
Sbjct: 1   MSGGTPVGGGFMRQRHSQGYASSGDDLEDDACSRQTPSSPAMPRARTWTEVMENILWIAS 60

Query: 61  AIFIVYFGDRHSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTSMFTWGVRRFDEKW 120
           A+FI+Y+GDR+SN IYLL HD+RIRRLPLYLGMVG  +N++IF YTSMF  GV++F EKW
Sbjct: 61  AVFIIYYGDRNSNFIYLLLHDDRIRRLPLYLGMVGVSLNILIFFYTSMFASGVKKFCEKW 120

Query: 121 ELSSISALPLVTLLGLVSFCLLSFALWPVWSXXXXXXXXXXXMASMVICPHIMIVTFRQQ 180
           ELSS SALP +TLLGLVSFCL SFALWP+WS           MA +V  P++M  T R Q
Sbjct: 121 ELSSPSALPFLTLLGLVSFCLFSFALWPIWSFLTLPLLFTLFMACIVASPYVMTGTLRPQ 180

Query: 181 NDTFRID 187
            +  R D
Sbjct: 181 TEVLRTD 187


>D7LZF3_ARALY (tr|D7LZF3) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_910052 PE=4 SV=1
          Length = 188

 Score =  230 bits (587), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 111/177 (62%), Positives = 132/177 (74%)

Query: 11  YMRQRHSQGYASGGDDLEDDACXXXXXXXXXXXXXXXWVEIVENVLWIASAIFIVYFGDR 70
           Y+RQRHSQGYASGGDDLEDDAC               WVEI+ENVLWIASA+FIVYFGDR
Sbjct: 12  YIRQRHSQGYASGGDDLEDDACSRPQPFSLENPRSKTWVEILENVLWIASAVFIVYFGDR 71

Query: 71  HSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTSMFTWGVRRFDEKWELSSISALPL 130
           HSN+I++L HD RI+R+PLY GM+G  VN++I +Y SM +W +RRFDEKWEL SISALP 
Sbjct: 72  HSNMIHILLHDARIKRMPLYFGMLGIAVNIIIIIYESMLSWSMRRFDEKWELWSISALPF 131

Query: 131 VTLLGLVSFCLLSFALWPVWSXXXXXXXXXXXMASMVICPHIMIVTFRQQNDTFRID 187
           +TLLGL+SF LLSFALWP+W            MA +V+ PH+MI+ FR QND  RID
Sbjct: 132 ITLLGLISFGLLSFALWPIWGFLTLPLLFTLFMACLVVFPHLMIIKFRPQNDELRID 188


>Q84VV3_ARATH (tr|Q84VV3) At5g20120 OS=Arabidopsis thaliana GN=At5g20120 PE=2
           SV=1
          Length = 188

 Score =  226 bits (577), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 109/177 (61%), Positives = 131/177 (74%)

Query: 11  YMRQRHSQGYASGGDDLEDDACXXXXXXXXXXXXXXXWVEIVENVLWIASAIFIVYFGDR 70
           Y+RQRHSQGYASGGDDLEDDAC               WVEI+ENVLWIASA+FIVYFGDR
Sbjct: 12  YIRQRHSQGYASGGDDLEDDACSRPQPFSLENPRSKTWVEILENVLWIASAVFIVYFGDR 71

Query: 71  HSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTSMFTWGVRRFDEKWELSSISALPL 130
           HSN+I++L  D RI+R+PLY GM+G  VN++I +Y SM +W +RRFDEKWEL SISALP 
Sbjct: 72  HSNMIHILLRDARIKRMPLYFGMLGIAVNIIIIIYESMLSWSMRRFDEKWELWSISALPF 131

Query: 131 VTLLGLVSFCLLSFALWPVWSXXXXXXXXXXXMASMVICPHIMIVTFRQQNDTFRID 187
           +TLLG++SF LLSFALWP+W            MA +V+ PH+MI+ FR QND  RID
Sbjct: 132 ITLLGIISFGLLSFALWPIWGFLTLPLLFTLFMACLVVFPHLMIIKFRPQNDELRID 188


>A5BHH3_VITVI (tr|A5BHH3) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_011674 PE=4 SV=1
          Length = 142

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 57/86 (66%), Positives = 67/86 (77%)

Query: 1   MSGGSPVGGGYMRQRHSQGYASGGDDLEDDACXXXXXXXXXXXXXXXWVEIVENVLWIAS 60
           MSGG+PVGGG+MRQRHSQGYAS GDDLEDDAC               W E++EN+LWIAS
Sbjct: 57  MSGGTPVGGGFMRQRHSQGYASSGDDLEDDACSRQTPSSPAMPRARTWTEVMENILWIAS 116

Query: 61  AIFIVYFGDRHSNLIYLLWHDERIRR 86
           A+FI+Y+GDR+SN IYLL HD+RIRR
Sbjct: 117 AVFIIYYGDRNSNFIYLLLHDDRIRR 142


>A9T2C9_PHYPA (tr|A9T2C9) Predicted protein (Fragment) OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_18548 PE=4 SV=1
          Length = 120

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 78/120 (65%)

Query: 53  ENVLWIASAIFIVYFGDRHSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTSMFTWG 112
           EN+LW+A+A+F +Y+GD   +L ++L++D RIRR P  LG++G  +N  IF Y +++   
Sbjct: 1   ENLLWLAAAVFAIYYGDSRHHLFHVLFYDTRIRRFPFQLGLLGLAINTAIFTYLAIWLRH 60

Query: 113 VRRFDEKWELSSISALPLVTLLGLVSFCLLSFALWPVWSXXXXXXXXXXXMASMVICPHI 172
           + + ++KWEL + +A+P  TL+GL SF L S ALWP+W            MA +VI P++
Sbjct: 61  ILKTEDKWELIAPAAIPTATLVGLTSFLLFSIALWPIWGFLTLPLLFTLFMALVVISPYL 120


>A9S931_PHYPA (tr|A9S931) Predicted protein (Fragment) OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_18643 PE=4 SV=1
          Length = 139

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 4/141 (2%)

Query: 48  WVEIVENVLWIASAIFIVYFGDRHSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTS 107
           W   +EN+LW  +A+F +Y+GD   +L ++L+ D R+ R+P  LG     +   I  Y +
Sbjct: 2   WSRTIENLLWQFAAVFAIYYGDSRHHLCHVLFFDTRVCRIPFLLGFASLAIGAAISTYLA 61

Query: 108 MFTWGVRRFDEKWELSSISALPLVTLLGLVSFCLLSFALWPVWSXXXXXXXXXXXMA-SM 166
           ++   + + ++KWEL + +A+P  TL+GL S  L S ALWP+W            MA S 
Sbjct: 62  VWFRHILKCEDKWELIAPTAIPTATLVGLTSLLLFSVALWPIWDVLSLPLLITLLMALSA 121

Query: 167 VICPHIMIVTFRQQNDTFRID 187
            I PH+      +  D+ R+D
Sbjct: 122 TIVPHL---PLHRYGDSLRVD 139


>D5AB07_PICSI (tr|D5AB07) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 158

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 50/84 (59%)

Query: 89  LYLGMVGAGVNLVIFLYTSMFTWGVRRFDEKWELSSISALPLVTLLGLVSFCLLSFALWP 148
           L LG++    N+ IFLY S +   + + D++WE+ + +A+P  T++GL++F L   ALWP
Sbjct: 59  LNLGLLCVACNIGIFLYLSFWVKDMAKVDDRWEILAPAAIPTATVIGLLAFFLFCLALWP 118

Query: 149 VWSXXXXXXXXXXXMASMVICPHI 172
           +WS           MA +VI P+I
Sbjct: 119 IWSFLTLPLLFTLFMAFVVISPYI 142


>A0D8K6_PARTE (tr|A0D8K6) Chromosome undetermined scaffold_41, whole genome
           shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00014319001 PE=4 SV=1
          Length = 188

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 5/103 (4%)

Query: 48  WVEIVENVLWIASAIFIVYFGDRHSNLIYLLWHDERIRRLPLYLGMVGAGVNLVIFLYTS 107
           WV+  + V+WI++AI IVY+    SN    L+H+E I  L L + ++  G+++ + LY +
Sbjct: 38  WVK-AQAVMWISAAIGIVYY----SNFFKQLFHNENINELFLTIALLFIGMSISLSLYVA 92

Query: 108 MFTWGVRRFDEKWELSSISALPLVTLLGLVSFCLLSFALWPVW 150
            +   ++   E  E+ +  A+ L    G +SF  L+ A+WPV+
Sbjct: 93  FYVPFIKGVTEDIEIYNPKAIQLGAFAGFMSFLTLTIAIWPVF 135