Jatropha Genome Database

JcCA0312601.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312601.10 - phase: 0 /pseudo/partial
         (68 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C5MRG4_9ROSI (tr|C5MRG4) Palmitoyl transferase OS=Jatropha curca...    97   5e-19

>C5MRG4_9ROSI (tr|C5MRG4) Palmitoyl transferase OS=Jatropha curcas PE=2 SV=1
          Length = 543

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/47 (95%), Positives = 46/47 (97%)

Query: 1   SNAQQKQNKRWFDKIGLGKIGDTGYAPILFSIVIALMFLFINSVLSG 47
           SNAQQK+NKRWFDKIGLGKIGDTGYAPILFSIVIALMFLFINSVLS 
Sbjct: 249 SNAQQKRNKRWFDKIGLGKIGDTGYAPILFSIVIALMFLFINSVLSA 295