Jatropha Genome Database

JcCA0311881.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311881.10 + phase: 2 /partial/short
         (44 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9MT32_POPTR (tr|B9MT32) Predicted protein OS=Populus trichocarp...    76   1e-12
Q9LMA2_ARATH (tr|Q9LMA2) Putative uncharacterized protein At1g19...    74   6e-12
Q8LF63_ARATH (tr|Q8LF63) Putative uncharacterized protein OS=Ara...    74   6e-12
D7KHB5_ARALY (tr|D7KHB5) Putative uncharacterized protein OS=Ara...    74   7e-12
B9RR54_RICCO (tr|B9RR54) Putative uncharacterized protein OS=Ric...    72   2e-11
C5XQ20_SORBI (tr|C5XQ20) Putative uncharacterized protein Sb03g0...    62   1e-08
B6TC81_MAIZE (tr|B6TC81) Putative uncharacterized protein OS=Zea...    61   4e-08
C6TFN9_SOYBN (tr|C6TFN9) Putative uncharacterized protein OS=Gly...    55   3e-06
D7TCA5_VITVI (tr|D7TCA5) Whole genome shotgun sequence of line P...    54   8e-06

>B9MT32_POPTR (tr|B9MT32) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_675902 PE=4 SV=1
          Length = 94

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 39/44 (88%)

Query: 1  NMVSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
           MVSLWTCSK+  IFFVAG+ VGYTLK RV+RWA+KLL+RLKDD
Sbjct: 51 QMVSLWTCSKMCAIFFVAGIVVGYTLKKRVRRWAAKLLRRLKDD 94


>Q9LMA2_ARATH (tr|Q9LMA2) Putative uncharacterized protein At1g19240
           OS=Arabidopsis thaliana GN=At1g19240 PE=2 SV=1
          Length = 104

 Score = 73.6 bits (179), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/42 (78%), Positives = 39/42 (92%)

Query: 3   VSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
           VS+WTCSK+  +FFVAGVFVGYTLK RV+RWASKLL+R+KDD
Sbjct: 63  VSVWTCSKLCAVFFVAGVFVGYTLKRRVRRWASKLLRRIKDD 104


>Q8LF63_ARATH (tr|Q8LF63) Putative uncharacterized protein OS=Arabidopsis
           thaliana PE=4 SV=1
          Length = 104

 Score = 73.6 bits (179), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/42 (78%), Positives = 39/42 (92%)

Query: 3   VSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
           VS+WTCSK+  +FFVAGVFVGYTLK RV+RWASKLL+R+KDD
Sbjct: 63  VSVWTCSKLCAVFFVAGVFVGYTLKRRVRRWASKLLRRIKDD 104


>D7KHB5_ARALY (tr|D7KHB5) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_472147 PE=4 SV=1
          Length = 103

 Score = 73.6 bits (179), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/42 (78%), Positives = 39/42 (92%)

Query: 3   VSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
           VS+WTCSK+  +FFVAGVFVGYTLK RV+RWASKLL+R+KDD
Sbjct: 62  VSVWTCSKLCAVFFVAGVFVGYTLKRRVRRWASKLLRRIKDD 103


>B9RR54_RICCO (tr|B9RR54) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0709680 PE=4 SV=1
          Length = 100

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 38/44 (86%)

Query: 1   NMVSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
            +VSLWTCSK+  +FF+AGV VGYTLK RV+RWASKLLK L+DD
Sbjct: 57  QLVSLWTCSKLCTVFFIAGVLVGYTLKRRVRRWASKLLKTLRDD 100


>C5XQ20_SORBI (tr|C5XQ20) Putative uncharacterized protein Sb03g006230
          OS=Sorghum bicolor GN=Sb03g006230 PE=4 SV=1
          Length = 91

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 36/43 (83%)

Query: 2  MVSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
          +VSL TC+KVS I F  G+ VG+TLK R++RWA++LLKR+KDD
Sbjct: 48 VVSLSTCTKVSAISFAVGIVVGFTLKKRLRRWAARLLKRIKDD 90


>B6TC81_MAIZE (tr|B6TC81) Putative uncharacterized protein OS=Zea mays PE=4
          SV=1
          Length = 92

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 35/43 (81%)

Query: 2  MVSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
          +VSL TC+KVS I F  GV  G+TLK R++RWA++LLKR+KDD
Sbjct: 48 VVSLSTCAKVSAISFAIGVVAGFTLKKRLRRWAARLLKRIKDD 90


>C6TFN9_SOYBN (tr|C6TFN9) Putative uncharacterized protein OS=Glycine max PE=4
          SV=1
          Length = 82

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 30/41 (73%)

Query: 1  NMVSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRL 41
            VS WTCSK+    FVAG   GY+L+ RVKRWASK+LK+L
Sbjct: 41 QAVSYWTCSKLCAFCFVAGAVFGYSLRGRVKRWASKMLKKL 81


>D7TCA5_VITVI (tr|D7TCA5) Whole genome shotgun sequence of line PN40024,
          scaffold_16.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00015026001 PE=4 SV=1
          Length = 90

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 38/44 (86%)

Query: 1  NMVSLWTCSKVSIIFFVAGVFVGYTLKSRVKRWASKLLKRLKDD 44
            VSLWTCSK+  +FFVAGV VGYTLK RV+RWASKLL+RLKDD
Sbjct: 47 QAVSLWTCSKLCAVFFVAGVVVGYTLKRRVRRWASKLLRRLKDD 90