Jatropha Genome Database

JcCA0309871.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0309871.10 + phase: 0 
         (70 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RAL1_RICCO (tr|B9RAL1) Putative uncharacterized protein OS=Ric...    79   2e-13
Q8LEB7_ARATH (tr|Q8LEB7) At5g50335 OS=Arabidopsis thaliana GN=At...    68   3e-10
D7MQ52_ARALY (tr|D7MQ52) Putative uncharacterized protein (Fragm...    65   3e-09

>B9RAL1_RICCO (tr|B9RAL1) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1507110 PE=4 SV=1
          Length = 71

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 33 CNKGKTCKFKRSSSNLEDDGASSAIFLLACIACTTPSY 70
          CNKGKTCKFKRSSSNLEDDGASSAI LLACIACTTPSY
Sbjct: 34 CNKGKTCKFKRSSSNLEDDGASSAILLLACIACTTPSY 71


>Q8LEB7_ARATH (tr|Q8LEB7) At5g50335 OS=Arabidopsis thaliana
          GN=At5g50335/MXI22.20 PE=4 SV=1
          Length = 74

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 45/51 (88%), Gaps = 4/51 (7%)

Query: 24 NQYQQKQIQ----CNKGKTCKFKRSSSNLEDDGASSAIFLLACIACTTPSY 70
          +++Q+K++Q    CNK K+C+FKRS+SNL++DGASSAIFLLACIAC++ SY
Sbjct: 22 DRHQKKKMQSITNCNKEKSCRFKRSTSNLDNDGASSAIFLLACIACSSFSY 72


>D7MQ52_ARALY (tr|D7MQ52) Putative uncharacterized protein (Fragment)
          OS=Arabidopsis lyrata subsp. lyrata
          GN=ARALYDRAFT_495095 PE=4 SV=1
          Length = 70

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 41/48 (85%), Gaps = 4/48 (8%)

Query: 24 NQYQQKQIQ----CNKGKTCKFKRSSSNLEDDGASSAIFLLACIACTT 67
          ++YQ+K+IQ    CNK K C+FKRS+S L++DGASSAIFLLACIAC++
Sbjct: 22 DRYQKKKIQSITNCNKEKGCRFKRSTSKLDNDGASSAIFLLACIACSS 69