Jatropha Genome Database
- JcCA0309311.20
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0309311.20 - phase: 0
(115 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9T3M7_RICCO (tr|B9T3M7) DNA binding protein, putative OS=Ricinu... 149 8e-35
A9PAN4_POPTR (tr|A9PAN4) Methyl binding domain protein OS=Populu... 120 6e-26
B9HPH2_POPTR (tr|B9HPH2) Methyl binding domain protein OS=Populu... 109 1e-22
A5B1D4_VITVI (tr|A5B1D4) Putative uncharacterized protein OS=Vit... 77 7e-13
Q9SNC0_ARATH (tr|Q9SNC0) Putative uncharacterized protein At3g46... 77 8e-13
D7LN21_ARALY (tr|D7LN21) Putative uncharacterized protein OS=Ara... 76 1e-12
Q9LTJ1_ARATH (tr|Q9LTJ1) At5g59380 OS=Arabidopsis thaliana GN=At... 75 2e-12
Q8LCG6_ARATH (tr|Q8LCG6) Putative uncharacterized protein OS=Ara... 75 2e-12
D7SKF1_VITVI (tr|D7SKF1) Whole genome shotgun sequence of line P... 74 3e-12
D7MSE3_ARALY (tr|D7MSE3) Putative uncharacterized protein OS=Ara... 69 1e-10
D7SKK8_VITVI (tr|D7SKK8) Whole genome shotgun sequence of line P... 59 1e-07
B9HPK6_POPTR (tr|B9HPK6) Methyl binding domain protein OS=Populu... 58 3e-07
A5AZB5_VITVI (tr|A5AZB5) Putative uncharacterized protein OS=Vit... 57 6e-07
>B9T3M7_RICCO (tr|B9T3M7) DNA binding protein, putative OS=Ricinus communis
GN=RCOM_1165760 PE=4 SV=1
Length = 234
Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 82/111 (73%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXXXG 63
YYIEP TGR+FRSK+EVQY+LETGT KK K+G E+SE DVN E+ GSQ
Sbjct: 123 YYIEPVTGRRFRSKKEVQYFLETGTKKKTKRGMENSEGDVNFTESPGSQKSKKASKNAKV 182
Query: 64 SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSWEFEMMHFH 114
FDYLNVPD+IEWAL AN+DAWTPF GG KV EY+RQ+W+FEM+H H
Sbjct: 183 QKRNFDYLNVPDRIEWALIDANQDAWTPFLGGQKVAEYDRQNWDFEMLHLH 233
>A9PAN4_POPTR (tr|A9PAN4) Methyl binding domain protein OS=Populus trichocarpa
GN=MBD905 PE=2 SV=1
Length = 214
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXXXG 63
YYIEP +GR+FRSK++VQYYLETGTLKKR K AE+ +AD N ENS S
Sbjct: 97 YYIEPVSGRRFRSKKDVQYYLETGTLKKRGKVAENVDADTNSAENSKSSKNKSGANTNFA 156
Query: 64 SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSWEFEMMHF 113
FD NVPD+ EW LT ANED WTPF G KVP Y+++ W+F
Sbjct: 157 --WNFDSFNVPDRTEWFLTEANEDTWTPFIDGKKVPLYDKEQWDFTFASL 204
>B9HPH2_POPTR (tr|B9HPH2) Methyl binding domain protein OS=Populus trichocarpa
GN=MBD904 PE=4 SV=1
Length = 214
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXXXG 63
YYI+P +GRKFRSK++VQYYLETGTLKK+ K E+S+AD N ++G+
Sbjct: 97 YYIDPASGRKFRSKKDVQYYLETGTLKKKGKLTENSDADTN---SAGNLKVDKNKSGANT 153
Query: 64 SI-MKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSWEFEMMHF 113
S + FD NVPD+ EW L A ED W PF G KVP Y+++ W+F
Sbjct: 154 SFALNFDSFNVPDRTEWVLANAKEDTWIPFIDGKKVPLYDKEQWDFAFASL 204
>A5B1D4_VITVI (tr|A5B1D4) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_003810 PE=4 SV=1
Length = 319
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 2 KMYYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXX 61
++Y+IEP TGR+FRSK+EV+YYLETG ++K+ K P+NS +
Sbjct: 8 QVYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKN---------PDNSPEKGTKSPP--- 55
Query: 62 XGSIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW--EFEMMHFHR 115
+ F++ +VPD ++W T ++E WTPF G +VPE ++ W FE + +
Sbjct: 56 ----LNFNFEDVPDTVKWVRTGSSE-GWTPFINGQEVPESSKRDWAAAFEFLALKK 106
>Q9SNC0_ARATH (tr|Q9SNC0) Putative uncharacterized protein At3g46580
OS=Arabidopsis thaliana GN=F12A12.100 PE=2 SV=1
Length = 182
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRK-KGAESSEADVNPPENSGSQXXXXXXXXXX 62
+Y EP TGRKFRSK EV YYLE GT KK+ K AE+ ++ E GS
Sbjct: 58 FYYEPITGRKFRSKNEVLYYLEHGTPKKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKV 117
Query: 63 G----SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSWE 107
+ FD+LNVP+K+ W +E+AW PF G K+ E Q W+
Sbjct: 118 TEPPPKPLNFDFLNVPEKVTWTGINGSEEAWLPFIGDYKIQESVSQDWD 166
>D7LN21_ARALY (tr|D7LN21) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_485028 PE=4 SV=1
Length = 181
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXXXG 63
+Y EP TGRKFRSK EV YYLE G KK K AE+ ++ E GS
Sbjct: 58 FYYEPITGRKFRSKNEVLYYLEHGAPKKAVKKAENGDSLSEHSEGRGSIRRQTKSNKKAN 117
Query: 64 ----SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW 106
+ FD+LNVP+K+ W +E+AW PF G K+ E Q W
Sbjct: 118 EPPPKPLNFDFLNVPEKVTWTGINGSEEAWLPFIGDYKIQESVSQDW 164
>Q9LTJ1_ARATH (tr|Q9LTJ1) At5g59380 OS=Arabidopsis thaliana GN=At5g59380 PE=2
SV=1
Length = 225
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXX--XX 61
YY EP TGRKFRS+ EV YYLE GT K+ K AE++ + + E GS
Sbjct: 104 YYYEPNTGRKFRSRTEVLYYLEHGTSKRGTKKAENTYFNPDHFEGQGSNRVTRTATVPPP 163
Query: 62 XGSIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW 106
+ FD+ N PDK+ W++ A E+ W P G KV + R+ W
Sbjct: 164 PPPPLDFDFKNPPDKVSWSMANAGEEGWIPNIGDVKVQDSVRRDW 208
>Q8LCG6_ARATH (tr|Q8LCG6) Putative uncharacterized protein OS=Arabidopsis
thaliana PE=2 SV=1
Length = 182
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRK-KGAESSEADVNPPENSGSQXXXXXXXXXX 62
+Y EP TGRKFRSK EV YYLE GT KK+ K AE+ ++ E GS
Sbjct: 58 FYYEPITGRKFRSKNEVLYYLEHGTPKKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKV 117
Query: 63 G----SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSWE 107
+ FD+LNVP+K+ W +E+ W PF G K+ E Q W+
Sbjct: 118 TEPPPKPLNFDFLNVPEKVTWTGINGSEETWLPFIGDYKIQESVSQDWD 166
>D7SKF1_VITVI (tr|D7SKF1) Whole genome shotgun sequence of line PN40024,
scaffold_4.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00024954001 PE=4 SV=1
Length = 135
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXXXG 63
Y+IEP TGR+FRSK+EV+YYLETG ++K+ K P+NS +
Sbjct: 33 YFIEPITGRRFRSKKEVRYYLETGEVRKKPKKN---------PDNSPEKGTKSPP----- 78
Query: 64 SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW--EFEMMHF 113
+ F++ +VPD ++W T ++E WTPF G +VPE ++ W FE +
Sbjct: 79 --LNFNFEDVPDTVKWVRTGSSE-GWTPFINGQEVPESSKRDWAAAFEFLAL 127
>D7MSE3_ARALY (tr|D7MSE3) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_919168 PE=4 SV=1
Length = 233
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKK-RKKGAESSEADVNPPENSGSQXXXXXXX--X 60
YY EP TGRKFRS+ EV YYLE GT K+ K E+++ + E GS
Sbjct: 111 YYYEPNTGRKFRSRTEVLYYLEHGTSKRGGTKKVENTDFLSDHFEGQGSNRARRKAKEPP 170
Query: 61 XXGSIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW 106
+ FD+ N P+K+ W++ A E+AW P G KV + R+ W
Sbjct: 171 PPPPPLDFDFKNPPEKVSWSMAKAGEEAWIPIIGDVKVQDSVRRDW 216
>D7SKK8_VITVI (tr|D7SKK8) Whole genome shotgun sequence of line PN40024,
scaffold_4.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00025031001 PE=4 SV=1
Length = 212
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXXXG 63
YY EP TGR+FRS + VQ +L E+++ P +NS +
Sbjct: 111 YYYEPGTGRQFRSLKSVQRHL-----------IEANDCTHKPSQNSDASKKNNSSTKVKT 159
Query: 64 SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW-EFEMMHFH 114
S F + P K+ W LT D W+P+ S VPE +Q+W + M+H +
Sbjct: 160 STSHF--IKPPKKVNWVLTGPGGDVWSPYINASAVPESIKQTWAKIFMLHVN 209
>B9HPK6_POPTR (tr|B9HPK6) Methyl binding domain protein OS=Populus trichocarpa
GN=MBD906 PE=4 SV=1
Length = 236
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVN--PPENSGSQXXXXXXXXX 61
+Y EP TG++FRS R V+ YL G K+ E+ +A N P ++S SQ
Sbjct: 124 HYFEPETGKRFRSLRSVEKYLTEG--KEHIATLEALKAGDNFIPSKSSSSQKEHVSRKKV 181
Query: 62 XGSIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW 106
S++ D ++P KI+W L+ W PF S VPE+ +Q W
Sbjct: 182 ETSML--DPSSIPAKIKWVLSGPGGIVWNPFMDDSLVPEFIKQKW 224
>A5AZB5_VITVI (tr|A5AZB5) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_012829 PE=4 SV=1
Length = 212
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 4 YYIEPTTGRKFRSKREVQYYLETGTLKKRKKGAESSEADVNPPENSGSQXXXXXXXXXXG 63
YY EP GR+FRS + VQ +L E+++ P +NS +
Sbjct: 111 YYYEPGXGRQFRSLKSVQRHL-----------IEANDCTHKPSQNSDASKKNNSSTKVKT 159
Query: 64 SIMKFDYLNVPDKIEWALTVANEDAWTPFTGGSKVPEYERQSW-EFEMMHFH 114
S F + P K+ W LT D W+P+ S VPE +Q+W + M+H +
Sbjct: 160 STSHF--IKPPKKVNWVLTGPGGDVWSPYINASAVPESIKQTWAKIFMLHVN 209