Jatropha Genome Database
- JcCA0308071.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0308071.10 - phase: 2 /pseudo/partial
(304 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RMP1_RICCO (tr|B9RMP1) DELLA protein GAI1, putative OS=Ricinus... 108 5e-22
B9I3M1_POPTR (tr|B9I3M1) GRAS family transcription factor OS=Pop... 99 6e-19
D7TAK7_VITVI (tr|D7TAK7) Whole genome shotgun sequence of line P... 96 6e-18
D0VEW6_PONTR (tr|D0VEW6) GRAS family transcription factor OS=Pon... 95 8e-18
D7SHA0_VITVI (tr|D7SHA0) Whole genome shotgun sequence of line P... 90 3e-16
B9RAM0_RICCO (tr|B9RAM0) DELLA protein RGL1, putative OS=Ricinus... 89 4e-16
B9IF61_POPTR (tr|B9IF61) GRAS family transcription factor OS=Pop... 85 1e-14
Q8RZ73_ORYSJ (tr|Q8RZ73) Gibberellin response modulator-like pro... 82 6e-14
A2WY18_ORYSI (tr|A2WY18) Putative uncharacterized protein OS=Ory... 80 2e-13
C5XFG6_SORBI (tr|C5XFG6) Putative uncharacterized protein Sb03g0... 79 5e-13
>B9RMP1_RICCO (tr|B9RMP1) DELLA protein GAI1, putative OS=Ricinus communis
GN=RCOM_1082450 PE=4 SV=1
Length = 507
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Query: 221 KPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLRITGVGNSGERLEAI 280
+ FEGESSIHV+DLGM+LGLP G+QWRNL+H LAN P+ LRITGVGNS ERL+A+
Sbjct: 239 EAFEGESSIHVVDLGMTLGLPHGEQWRNLLHCLANRPDKK-PRCLRITGVGNSAERLQAL 297
Query: 281 GNELECYARCMGFNNLEF 298
G+EL+CYAR +G N EF
Sbjct: 298 GDELDCYARSLGL-NFEF 314
>B9I3M1_POPTR (tr|B9I3M1) GRAS family transcription factor OS=Populus trichocarpa
GN=GRAS71 PE=4 SV=1
Length = 516
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 147 LFLGRHFKELLLALFKGYLIGLCLFNHLGLSEFQLLQQKQLLVSHQRRMKPCAFSMKFCH 206
L G F+ + +G + L L LG F + ++ ++ + + C
Sbjct: 175 LVFGSAFQRVASCFVQGLIDRLSLVQPLGAVGFVAPTMNIIDIASDKKEEALRLVYEICP 234
Query: 207 KSNLVILLQTXPYWKPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLR 266
+ + FEGESS+HV+DLGM+LGLP G QWR LI LA + PP RLR
Sbjct: 235 HIRFGHFVANNSILEAFEGESSVHVVDLGMTLGLPHGHQWRLLIQSLAER-AGKPPSRLR 293
Query: 267 ITGVGNSGERLEAIGNELECYARCMGFNNLEFYMSKAA 304
ITGVG +R IG+ELE YA+ MG NLEF + K++
Sbjct: 294 ITGVGLCVDRFRIIGDELEEYAKDMGI-NLEFSVVKSS 330
>D7TAK7_VITVI (tr|D7TAK7) Whole genome shotgun sequence of line PN40024,
scaffold_10.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00010305001 PE=4 SV=1
Length = 347
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Query: 221 KPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLRITGVGNSGERLEAI 280
+ FEGESS+HV+DLGM+LG PQGQQWR+L+H LAN + PP L+ITGVG + E L+ I
Sbjct: 107 EAFEGESSVHVVDLGMNLGSPQGQQWRSLMHSLANR-AGKPPSSLQITGVGTAAECLKDI 165
Query: 281 GNELECYARCMGFNNLEFYM 300
+ELE YA +G N +F M
Sbjct: 166 IDELEVYAESLGM-NFQFSM 184
>D0VEW6_PONTR (tr|D0VEW6) GRAS family transcription factor OS=Poncirus trifoliata
PE=2 SV=1
Length = 509
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Query: 221 KPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLRITGVGNSGERLEAI 280
+ FEGES +HV+DLGM+LGLP+GQQWR LI LAN + PP+RLRIT VG E+ ++I
Sbjct: 242 EAFEGESLVHVVDLGMTLGLPRGQQWRRLIESLANR-AGQPPRRLRITAVGLCVEKFQSI 300
Query: 281 GNELECYARCMGFNNLEF 298
G+EL+ YA+ G NLEF
Sbjct: 301 GDELKDYAKTYGI-NLEF 317
>D7SHA0_VITVI (tr|D7SHA0) Whole genome shotgun sequence of line PN40024,
scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00007532001 PE=4 SV=1
Length = 491
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 147 LFLGRHFKELLLALFKGYLIGLCLFNHLGLSEFQLLQQKQLLVSHQRRMKPCAFSMKFCH 206
L G F+ + +G L L LG F L + +++ + + C
Sbjct: 178 LVFGSSFQRVASCFVQGLADRLSLVQPLGAVGFIAPSINPLDTAWEKKEEALRLVYEICP 237
Query: 207 KSNLVILLQTXPYWKPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLR 266
+ + FEGE+ HV+DLGM+LGL GQQWR LIH LAN + PP+RLR
Sbjct: 238 HIKFGHFVANASILEAFEGENFAHVVDLGMTLGLAHGQQWRQLIHSLANR-AGRPPRRLR 296
Query: 267 ITGVGNSGERLEAIGNELECYARCMGFN 294
ITGVG +R + IG ELE YA+ + N
Sbjct: 297 ITGVGLCVDRFKIIGEELEAYAQDLDIN 324
>B9RAM0_RICCO (tr|B9RAM0) DELLA protein RGL1, putative OS=Ricinus communis
GN=RCOM_1507300 PE=4 SV=1
Length = 526
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 147 LFLGRHFKELLLALFKGYLIGLCLFNHLGLSEFQLLQQKQLLVSHQRRMKPCAFSMKFCH 206
L G F+ + F+G L L LG + ++ ++ + + + C
Sbjct: 185 LVFGSSFQRVASCFFQGLADRLSLVQPLGTVSLVTPIMNIMDIASDKKEEALSLVYEICP 244
Query: 207 KSNLVILLQTXPYWKPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLR 266
+ + FEGES +HV+DLGM+LGLP G QWR LI LAN + PP RLR
Sbjct: 245 HIQFGHFVANSSILEAFEGESFVHVVDLGMTLGLPHGHQWRQLIQSLANR-AGKPPCRLR 303
Query: 267 ITGVGNSGERLEAIGNELECYARCMGFNNLEF 298
IT VG R + IG+EL YA+ +G NLEF
Sbjct: 304 ITAVGLCVGRFQTIGDELVEYAKDVGI-NLEF 334
>B9IF61_POPTR (tr|B9IF61) GRAS family transcription factor OS=Populus trichocarpa
GN=GRAS72 PE=4 SV=1
Length = 523
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 221 KPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLRITGVGNSGERLEAI 280
+ FEGES +HV+DLGM+LGL G QWR LI LA + P RLRITGVG +R I
Sbjct: 250 EAFEGESFVHVVDLGMTLGLSHGHQWRRLIESLAER-AGKAPSRLRITGVGLCVDRFRII 308
Query: 281 GNELECYARCMGFNNLEF 298
G+EL+ YA+ MG NLEF
Sbjct: 309 GDELKEYAKDMGI-NLEF 325
>Q8RZ73_ORYSJ (tr|Q8RZ73) Gibberellin response modulator-like protein OS=Oryza
sativa subsp. japonica GN=B1065G12.22 PE=4 SV=1
Length = 532
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 221 KPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLRITGVGNSGERLEAI 280
+ FEGES++HV+DLGM+LGL +G QWR L+ LA +S P R+R+TGVG + + AI
Sbjct: 265 EAFEGESNVHVVDLGMTLGLDRGHQWRGLLDGLAARASGK-PARVRVTGVGARMDTMRAI 323
Query: 281 GNELECYARCMGFNNLEF 298
G ELE YA +G LEF
Sbjct: 324 GRELEAYAEGLGM-YLEF 340
>A2WY18_ORYSI (tr|A2WY18) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_04822 PE=4 SV=1
Length = 532
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 221 KPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSANPPKRLRITGVGNSGERLEAI 280
+ FEGES++HV+DLGM+LGL +G QWR L+ LA + P R+R+TGVG + + AI
Sbjct: 265 EAFEGESNVHVVDLGMTLGLDRGHQWRGLLDGLAARARGK-PARVRVTGVGARMDTMRAI 323
Query: 281 GNELECYARCMGFNNLEF 298
G ELE YA +G LEF
Sbjct: 324 GRELEAYAEGLGM-YLEF 340
>C5XFG6_SORBI (tr|C5XFG6) Putative uncharacterized protein Sb03g043030 OS=Sorghum
bicolor GN=Sb03g043030 PE=4 SV=1
Length = 537
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 9/92 (9%)
Query: 202 MKFCH-KSNLVILLQTXPYWKPFEGESSIHVIDLGMSLGLPQGQQWRNLIHRLANNSSAN 260
++F H +N IL + FEGES++HV+DLGM+LGL + QWR L+ LA + A
Sbjct: 257 LRFAHFVANASIL-------EAFEGESNVHVLDLGMTLGLDRAHQWRGLLDGLAARAGAK 309
Query: 261 PPKRLRITGVGNSGERLEAIGNELECYARCMG 292
P R+R+T VG E + A+G ELE YA +G
Sbjct: 310 -PARVRVTAVGAPAETMRAVGRELEAYAEGLG 340