Jatropha Genome Database

JcCA0306361.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306361.10 - phase: 0 
         (131 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7MCU1_ARALY (tr|D7MCU1) Putative uncharacterized protein OS=Ara...    62   3e-08
Q3E9Z5_ARATH (tr|Q3E9Z5) Putative uncharacterized protein OS=Ara...    61   3e-08
A0MF79_ARATH (tr|A0MF79) Putative uncharacterized protein (Fragm...    61   3e-08

>D7MCU1_ARALY (tr|D7MCU1) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_493032 PE=4 SV=1
          Length = 159

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 29/36 (80%)

Query: 92  AFSVMLPKGFVPPSGSSPCHNEKPTSRLTFHCDLSS 127
            FSVMLPKGFVPPSGSSPCHN+ P S  T  CDLS+
Sbjct: 122 TFSVMLPKGFVPPSGSSPCHNQNPNSATTLFCDLST 157


>Q3E9Z5_ARATH (tr|Q3E9Z5) Putative uncharacterized protein OS=Arabidopsis
           thaliana GN=At4g18335 PE=4 SV=1
          Length = 164

 Score = 61.2 bits (147), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 30/39 (76%)

Query: 89  KTRAFSVMLPKGFVPPSGSSPCHNEKPTSRLTFHCDLSS 127
           +   FSVMLPKGFVPPSGSSPCHN+ P S  T  CDLS+
Sbjct: 124 RQDTFSVMLPKGFVPPSGSSPCHNQNPNSATTLFCDLST 162


>A0MF79_ARATH (tr|A0MF79) Putative uncharacterized protein (Fragment)
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 165

 Score = 61.2 bits (147), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 30/39 (76%)

Query: 89  KTRAFSVMLPKGFVPPSGSSPCHNEKPTSRLTFHCDLSS 127
           +   FSVMLPKGFVPPSGSSPCHN+ P S  T  CDLS+
Sbjct: 124 RQDTFSVMLPKGFVPPSGSSPCHNQNPNSATTLFCDLST 162