Jatropha Genome Database
- JcCA0302271.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0302271.10 + phase: 0
(63 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D6BR49_9ROSI (tr|D6BR49) Cytochrome c oxidase polypeptide Vc OS=... 98 3e-19
B9RNE3_RICCO (tr|B9RNE3) Cytochrome c oxidase polypeptide Vc, pu... 94 5e-18
A9PJU3_9ROSI (tr|A9PJU3) Putative uncharacterized protein OS=Pop... 92 3e-17
A9P9E1_POPTR (tr|A9P9E1) Predicted protein OS=Populus trichocarp... 92 3e-17
A3CIF7_ORYSJ (tr|A3CIF7) Putative uncharacterized protein OS=Ory... 91 3e-17
B9GSS9_POPTR (tr|B9GSS9) Predicted protein OS=Populus trichocarp... 91 5e-17
B9NG59_POPTR (tr|B9NG59) Predicted protein OS=Populus trichocarp... 90 9e-17
C5YPS8_SORBI (tr|C5YPS8) Putative uncharacterized protein Sb08g0... 89 1e-16
B4FFJ1_MAIZE (tr|B4FFJ1) Cytochrome c oxidase polypeptide Vc OS=... 89 1e-16
C6T2P2_SOYBN (tr|C6T2P2) Putative uncharacterized protein OS=Gly... 88 4e-16
B6TQW4_MAIZE (tr|B6TQW4) Cytochrome c oxidase polypeptide Vc OS=... 87 4e-16
D7MUJ5_ARALY (tr|D7MUJ5) Putative uncharacterized protein OS=Ara... 87 6e-16
Q2HIR0_ARATH (tr|Q2HIR0) At5g61310 OS=Arabidopsis thaliana PE=4 ... 87 8e-16
A1YMW4_BRACM (tr|A1YMW4) Cytochrome-c oxidase OS=Brassica campes... 86 1e-15
B6T216_MAIZE (tr|B6T216) Cytochrome c oxidase polypeptide Vc OS=... 86 1e-15
D7LT63_ARALY (tr|D7LT63) Cytochrome c oxidase subunit VC family ... 86 1e-15
D7LGM4_ARALY (tr|D7LGM4) Cytochrome c oxidase subunit VC family ... 86 2e-15
D7UA32_VITVI (tr|D7UA32) Whole genome shotgun sequence of line P... 84 5e-15
B6T8U6_MAIZE (tr|B6T8U6) Cytochrome c oxidase polypeptide Vc OS=... 83 1e-14
D7MJ92_ARALY (tr|D7MJ92) Putative uncharacterized protein OS=Ara... 70 7e-11
D7TWL3_VITVI (tr|D7TWL3) Whole genome shotgun sequence of line P... 61 4e-08
B9SF97_RICCO (tr|B9SF97) Cytochrome c oxidase polypeptide Vc-2, ... 61 4e-08
A9NJT0_PICSI (tr|A9NJT0) Putative uncharacterized protein OS=Pic... 55 2e-06
>D6BR49_9ROSI (tr|D6BR49) Cytochrome c oxidase polypeptide Vc OS=Jatropha
curcas PE=4 SV=1
Length = 63
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 49/63 (77%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGGKIAHATLKGPSVVKE WKMHHWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1 MAGGKIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60
Query: 61 VDE 63
VDE
Sbjct: 61 VDE 63
>B9RNE3_RICCO (tr|B9RNE3) Cytochrome c oxidase polypeptide Vc, putative
OS=Ricinus communis GN=RCOM_0557130 PE=4 SV=1
Length = 63
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 48/63 (76%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG+IAHATLKGPSVVKE WKMHHWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1 MAGGRIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60
Query: 61 VDE 63
+E
Sbjct: 61 AEE 63
>A9PJU3_9ROSI (tr|A9PJU3) Putative uncharacterized protein OS=Populus
trichocarpa x Populus deltoides PE=4 SV=1
Length = 63
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 48/63 (76%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AH TLKGPSVV+E WKMHHWNEQRKVR+FYDLLEKGEISVV
Sbjct: 1 MAGGRVAHVTLKGPSVVRELCIGFALGLVAGSLWKMHHWNEQRKVRSFYDLLEKGEISVV 60
Query: 61 VDE 63
V+E
Sbjct: 61 VEE 63
>A9P9E1_POPTR (tr|A9P9E1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_664345 PE=4 SV=1
Length = 63
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 48/63 (76%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AH TLKGPSVV+E WKMHHWNEQRKVR+FYDLLEKGEISVV
Sbjct: 1 MAGGRVAHVTLKGPSVVRELCIGFALGLVAGSLWKMHHWNEQRKVRSFYDLLEKGEISVV 60
Query: 61 VDE 63
V+E
Sbjct: 61 VEE 63
>A3CIF7_ORYSJ (tr|A3CIF7) Putative uncharacterized protein OS=Oryza sativa
subsp. japonica GN=OsJ_36508 PE=4 SV=1
Length = 63
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 48/63 (76%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG+IAHATLKGPSVVKE WKMHHWNEQRK R+FYD+LEKG+ISVV
Sbjct: 1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60
Query: 61 VDE 63
V+E
Sbjct: 61 VEE 63
>B9GSS9_POPTR (tr|B9GSS9) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_799220 PE=4 SV=1
Length = 63
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 47/63 (74%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AH TLKGPSVVKE WKMHHWNEQRKVR+FYDLLEKGEI VV
Sbjct: 1 MAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGVV 60
Query: 61 VDE 63
V+E
Sbjct: 61 VEE 63
>B9NG59_POPTR (tr|B9NG59) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_790405 PE=4 SV=1
Length = 63
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 46/63 (73%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AH TLKGPSVVKE WKMHHWNEQRKVR+FYDLLEKGEI VV
Sbjct: 1 MAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGVV 60
Query: 61 VDE 63
V E
Sbjct: 61 VKE 63
>C5YPS8_SORBI (tr|C5YPS8) Putative uncharacterized protein Sb08g018180
OS=Sorghum bicolor GN=Sb08g018180 PE=4 SV=1
Length = 63
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AHATLKGPSVVKE WKMHHWNEQRK R+FYD+L+KG+ISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGMTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60
Query: 61 VDE 63
V+E
Sbjct: 61 VEE 63
>B4FFJ1_MAIZE (tr|B4FFJ1) Cytochrome c oxidase polypeptide Vc OS=Zea mays PE=4
SV=1
Length = 63
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AHATLKGPSVVKE WKMHHWNEQRK R+FYD+L+KG+ISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60
Query: 61 VDE 63
V+E
Sbjct: 61 VEE 63
>C6T2P2_SOYBN (tr|C6T2P2) Putative uncharacterized protein OS=Glycine max PE=4
SV=1
Length = 64
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 45/63 (71%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAG +IAHATL+GPSVVKE WKMHHWNEQRK R FYDLLEKGEISVV
Sbjct: 1 MAGPRIAHATLRGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60
Query: 61 VDE 63
+E
Sbjct: 61 AEE 63
>B6TQW4_MAIZE (tr|B6TQW4) Cytochrome c oxidase polypeptide Vc OS=Zea mays PE=4
SV=1
Length = 77
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 48/63 (76%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AHATLKGPSVVKE WKMHHWNEQRK R+FYD+L+KG+ISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60
Query: 61 VDE 63
V++
Sbjct: 61 VED 63
>D7MUJ5_ARALY (tr|D7MUJ5) Putative uncharacterized protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_496289 PE=4 SV=1
Length = 64
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 45/63 (71%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAG KIAHATLKGPSVVKE WKMHHWNEQRK RAFYDLLE+GEI VV
Sbjct: 1 MAGHKIAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRAFYDLLERGEIGVV 60
Query: 61 VDE 63
V E
Sbjct: 61 VAE 63
>Q2HIR0_ARATH (tr|Q2HIR0) At5g61310 OS=Arabidopsis thaliana PE=4 SV=1
Length = 64
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 44/63 (69%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAG KIAHATLKGPSVVKE WKMHHWNEQRK R FYDLLE+GEI VV
Sbjct: 1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60
Query: 61 VDE 63
V E
Sbjct: 61 VTE 63
>A1YMW4_BRACM (tr|A1YMW4) Cytochrome-c oxidase OS=Brassica campestris PE=4 SV=1
Length = 63
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 45/63 (71%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAG KIAHATLKGPSVVKE WKMHHWNEQRK RAFYDLL+K EISVV
Sbjct: 1 MAGHKIAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRAFYDLLDKDEISVV 60
Query: 61 VDE 63
V E
Sbjct: 61 VAE 63
>B6T216_MAIZE (tr|B6T216) Cytochrome c oxidase polypeptide Vc OS=Zea mays PE=4
SV=1
Length = 63
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 47/63 (74%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AHATLKGPSVVKE WKMH WNEQRK R+FYD+L+KG+ISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHXWNEQRKTRSFYDMLDKGQISVV 60
Query: 61 VDE 63
V+E
Sbjct: 61 VEE 63
>D7LT63_ARALY (tr|D7LT63) Cytochrome c oxidase subunit VC family protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_497318 PE=4 SV=1
Length = 64
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 44/63 (69%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAG K+AHATLKGPSVVKE WKMHHWNEQRK R FYDLLE+GEISVV
Sbjct: 1 MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60
Query: 61 VDE 63
E
Sbjct: 61 AAE 63
>D7LGM4_ARALY (tr|D7LGM4) Cytochrome c oxidase subunit VC family protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_483915 PE=4 SV=1
Length = 64
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 44/63 (69%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAG K+AHATLKGPSVVKE WKMHHWNEQRK R FYDLLE+GEISVV
Sbjct: 1 MAGHKVAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60
Query: 61 VDE 63
E
Sbjct: 61 AAE 63
>D7UA32_VITVI (tr|D7UA32) Whole genome shotgun sequence of line PN40024,
scaffold_60.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00031242001 PE=4 SV=1
Length = 63
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 45/63 (71%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MA KIAHATLKGPSVVKE WKMHHWNEQ+K+R FYD+LEK +ISVV
Sbjct: 1 MAAHKIAHATLKGPSVVKEICIGATLGLLAGGLWKMHHWNEQKKLRTFYDMLEKDQISVV 60
Query: 61 VDE 63
VDE
Sbjct: 61 VDE 63
>B6T8U6_MAIZE (tr|B6T8U6) Cytochrome c oxidase polypeptide Vc OS=Zea mays PE=4
SV=1
Length = 62
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 44/60 (73%)
Query: 1 MAGGKIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVV 60
MAGG++AHATLKGPSVVKE WKMHHWNEQRK R+FYD+L+KG+I VV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQIVVV 60
>D7MJ92_ARALY (tr|D7MJ92) Putative uncharacterized protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_493950 PE=4 SV=1
Length = 65
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 38/59 (64%)
Query: 5 KIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVVVDE 63
KI A KGPSVVKE WKMHHWN QR+ + FYDLLEKGEISVVV++
Sbjct: 6 KIGKAVYKGPSVVKEIIYGITLGLAVGGLWKMHHWNNQRRTKEFYDLLEKGEISVVVED 64
>D7TWL3_VITVI (tr|D7TWL3) Whole genome shotgun sequence of line PN40024,
scaffold_66.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00032434001 PE=4 SV=1
Length = 65
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 5 KIAHATLKGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVVVDE 63
KI A+ +GPS+ KE WK +HWN QR+ + FYD+LE+GEISVVV++
Sbjct: 6 KIGQASYRGPSIFKEIMYGLTAGLIAGGLWKRYHWNLQRRNKEFYDMLERGEISVVVED 64
>B9SF97_RICCO (tr|B9SF97) Cytochrome c oxidase polypeptide Vc-2, putative
OS=Ricinus communis GN=RCOM_1095680 PE=4 SV=1
Length = 65
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 12 KGPSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEISVVVDE 63
GPS++KE WKMHHWN Q++ + FYDLLE+GEISVVV++
Sbjct: 13 NGPSIIKEIIYGISLGLGAGLLWKMHHWNNQKRAKEFYDLLERGEISVVVED 64
>A9NJT0_PICSI (tr|A9NJT0) Putative uncharacterized protein OS=Picea sitchensis
PE=4 SV=1
Length = 66
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MAGGKI-AHATLKG-PSVVKEXXXXXXXXXXXXXXWKMHHWNEQRKVRAFYDLLEKGEIS 58
MA K+ +H LKG PSV+KE WKM+ W EQRK R FY++LE+G IS
Sbjct: 1 MAAHKVPSHVALKGGPSVIKEICYGLALGLMAGGVWKMYQWREQRKTREFYEMLERGVIS 60
Query: 59 VVVDE 63
VV +E
Sbjct: 61 VVHEE 65