Jatropha Genome Database

JcCA0296141.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0296141.10 - phase: 1 /pseudo/partial
         (92 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S057_RICCO (tr|B9S057) Putative uncharacterized protein OS=Ric...   117   3e-25
A9PIG4_POPTR (tr|A9PIG4) Putative uncharacterized protein OS=Pop...   114   3e-24
B9GVP8_POPTR (tr|B9GVP8) Predicted protein (Fragment) OS=Populus...   114   3e-24
D7TGJ5_VITVI (tr|D7TGJ5) Whole genome shotgun sequence of line P...   108   2e-22
D7LQ29_ARALY (tr|D7LQ29) Putative uncharacterized protein OS=Ara...   103   7e-21
Q8GZ36_ARATH (tr|Q8GZ36) At2g02410 OS=Arabidopsis thaliana GN=At...   102   2e-20
C5WT10_SORBI (tr|C5WT10) Putative uncharacterized protein Sb01g0...    67   8e-10
B6TD02_MAIZE (tr|B6TD02) RNA-binding protein containing a PIN do...    66   1e-09
B4FLF4_MAIZE (tr|B4FLF4) Putative uncharacterized protein OS=Zea...    66   1e-09
B8AN78_ORYSI (tr|B8AN78) Putative uncharacterized protein OS=Ory...    60   8e-08
Q75LE1_ORYSJ (tr|Q75LE1) Expressed protein (With alternative spl...    60   9e-08
Q0DLW3_ORYSJ (tr|Q0DLW3) Os03g0843200 protein (Fragment) OS=Oryz...    60   9e-08
Q10AS6_ORYSJ (tr|Q10AS6) Expressed protein OS=Oryza sativa subsp...    60   1e-07
A9RRQ4_PHYPA (tr|A9RRQ4) Predicted protein (Fragment) OS=Physcom...    60   1e-07
A9SIS4_PHYPA (tr|A9SIS4) Predicted protein (Fragment) OS=Physcom...    56   1e-06

>B9S057_RICCO (tr|B9S057) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1298920 PE=4 SV=1
          Length = 303

 Score =  117 bits (294), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/84 (73%), Positives = 64/84 (76%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD M          FVWS KALVSEIKASHKE+E MLQEQR TSFQGRLLKHN
Sbjct: 220 PKVWVVTSDRMQQHAAHGAGAFVWSSKALVSEIKASHKEVEMMLQEQRPTSFQGRLLKHN 279

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           LDSEVVDALKDLRNKLAENESK R
Sbjct: 280 LDSEVVDALKDLRNKLAENESKRR 303


>A9PIG4_POPTR (tr|A9PIG4) Putative uncharacterized protein OS=Populus trichocarpa
           PE=2 SV=1
          Length = 297

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 64/84 (76%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SDH+          F+WSCKALVSE+KAS +E+ER LQE R TSFQGRLLKHN
Sbjct: 214 PKVWVVTSDHIHQHAAHGAGAFIWSCKALVSEVKASQQEVERALQELRPTSFQGRLLKHN 273

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           LDSEVVDALKDLR KLAENESKSR
Sbjct: 274 LDSEVVDALKDLRKKLAENESKSR 297


>B9GVP8_POPTR (tr|B9GVP8) Predicted protein (Fragment) OS=Populus trichocarpa
           GN=POPTRDRAFT_415146 PE=4 SV=1
          Length = 253

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 64/84 (76%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SDH+          F+WSCKALVSE+KAS +E+ER LQE R TSFQGRLLKHN
Sbjct: 170 PKVWVVTSDHIHQHAAHGAGAFIWSCKALVSEVKASQQEVERALQELRPTSFQGRLLKHN 229

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           LDSEVVDALKDLR KLAENESKSR
Sbjct: 230 LDSEVVDALKDLRKKLAENESKSR 253


>D7TGJ5_VITVI (tr|D7TGJ5) Whole genome shotgun sequence of line PN40024,
           scaffold_35.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00023121001 PE=4 SV=1
          Length = 282

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/80 (68%), Positives = 61/80 (76%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD+           FVWSCKALVSEIKASHKE+ERMLQEQR TS QG+LLKHN
Sbjct: 201 PKVWVVTSDNCQQQAAHGAGAFVWSCKALVSEIKASHKEVERMLQEQRSTSMQGKLLKHN 260

Query: 69  LDSEVVDALKDLRNKLAENE 88
           LD+EVVDALKDLR KL+ENE
Sbjct: 261 LDAEVVDALKDLRKKLSENE 280


>D7LQ29_ARALY (tr|D7LQ29) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_484159 PE=4 SV=1
          Length = 306

 Score =  103 bits (256), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 49/61 (80%), Positives = 57/61 (93%)

Query: 30  FVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHNLDSEVVDALKDLRNKLAENES 89
           ++WS KALVSEIK+ HKE+ERM+QE R TSFQGRLLKHNLDSEVVDALKDLR+KL+ENE+
Sbjct: 245 YIWSSKALVSEIKSMHKEVERMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDKLSENET 304

Query: 90  K 90
           K
Sbjct: 305 K 305


>Q8GZ36_ARATH (tr|Q8GZ36) At2g02410 OS=Arabidopsis thaliana
           GN=At2g02410/T16F16.20 PE=2 SV=1
          Length = 308

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 57/61 (93%)

Query: 30  FVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHNLDSEVVDALKDLRNKLAENES 89
           ++WS KALVSEIK+ HKE+E+M+QE R TSFQGRLLKHNLDSEVVDALKDLR+KL+ENE+
Sbjct: 247 YIWSSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDKLSENET 306

Query: 90  K 90
           K
Sbjct: 307 K 307


>C5WT10_SORBI (tr|C5WT10) Putative uncharacterized protein Sb01g001680 OS=Sorghum
           bicolor GN=Sb01g001680 PE=4 SV=1
          Length = 289

 Score = 66.6 bits (161), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 49/84 (58%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD +           +WS K LV E+K S KE++  L+E R TS QG+LL+H 
Sbjct: 206 PKVWVVTSDALEQQLAHGEGALIWSSKRLVKELKESEKELDLELKETRSTSLQGKLLQHK 265

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           L+ +VV ALK LRNKL E E + +
Sbjct: 266 LNPKVVHALKGLRNKLEEQERRKK 289


>B6TD02_MAIZE (tr|B6TD02) RNA-binding protein containing a PIN domain OS=Zea mays
           PE=2 SV=1
          Length = 289

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 47/80 (58%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD +           +WS K LV E+K S KE++  L+E R TS QG+LL+H 
Sbjct: 206 PKVWVVTSDALEQQLAHGEGALIWSSKRLVKELKESEKELDLELKETRSTSLQGKLLQHK 265

Query: 69  LDSEVVDALKDLRNKLAENE 88
           L+ +VV ALK LRNKL E E
Sbjct: 266 LNPKVVRALKGLRNKLEEQE 285


>B4FLF4_MAIZE (tr|B4FLF4) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 289

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 47/80 (58%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD +           +WS K LV E+K S KE++  L+E R TS QG+LL+H 
Sbjct: 206 PKVWVVTSDALEQQLAHGEGALIWSSKRLVKELKESEKELDLELKETRSTSLQGKLLQHK 265

Query: 69  LDSEVVDALKDLRNKLAENE 88
           L+ +VV ALK LRNKL E E
Sbjct: 266 LNPKVVRALKGLRNKLEEQE 285


>B8AN78_ORYSI (tr|B8AN78) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_14278 PE=4 SV=1
          Length = 266

 Score = 60.1 bits (144), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD +           +WS K LV EIK S KE++  L+E R TS QG+L +H 
Sbjct: 183 PKVWVVTSDALEQQLAHGEGALIWSSKRLVKEIKESEKELDEELKETRSTSLQGKLFQHK 242

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           L  +VV ALKDLRNKL E E + R
Sbjct: 243 LKPKVVHALKDLRNKLEEEERRKR 266


>Q75LE1_ORYSJ (tr|Q75LE1) Expressed protein (With alternative splicing) OS=Oryza
           sativa subsp. japonica GN=OSJNBa0032G11.4 PE=4 SV=1
          Length = 288

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD +           +WS K LV EIK S KE++  L+E R TS QG+L +H 
Sbjct: 205 PKVWVVTSDALEQQLAHGEGALIWSSKRLVKEIKESEKELDEELKETRSTSLQGKLFQHK 264

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           L  +VV ALKDLRNKL E E + R
Sbjct: 265 LKPKVVHALKDLRNKLEEEERRKR 288


>Q0DLW3_ORYSJ (tr|Q0DLW3) Os03g0843200 protein (Fragment) OS=Oryza sativa subsp.
           japonica GN=Os03g0843200 PE=4 SV=1
          Length = 108

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD +           +WS K LV EIK S KE++  L+E R TS QG+L +H 
Sbjct: 25  PKVWVVTSDALEQQLAHGEGALIWSSKRLVKEIKESEKELDEELKETRSTSLQGKLFQHK 84

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           L  +VV ALKDLRNKL E E + R
Sbjct: 85  LKPKVVHALKDLRNKLEEEERRKR 108


>Q10AS6_ORYSJ (tr|Q10AS6) Expressed protein OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g62610 PE=4 SV=1
          Length = 309

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD +           +WS K LV EIK S KE++  L+E R TS QG+L +H 
Sbjct: 226 PKVWVVTSDALEQQLAHGEGALIWSSKRLVKEIKESEKELDEELKETRSTSLQGKLFQHK 285

Query: 69  LDSEVVDALKDLRNKLAENESKSR 92
           L  +VV ALKDLRNKL E E + R
Sbjct: 286 LKPKVVHALKDLRNKLEEEERRKR 309


>A9RRQ4_PHYPA (tr|A9RRQ4) Predicted protein (Fragment) OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_118421 PE=4 SV=1
          Length = 262

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 44/76 (57%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD            +VWSCK L+SEI  + KE++ +L ++   S +G+LL+HN
Sbjct: 184 PKVWVATSDTFHQHAAHGAGAYVWSCKNLISEINDAKKELQELLHDETMYSTKGKLLEHN 243

Query: 69  LDSEVVDALKDLRNKL 84
           LD EV DAL  L+ +L
Sbjct: 244 LDPEVRDALHALKQQL 259


>A9SIS4_PHYPA (tr|A9SIS4) Predicted protein (Fragment) OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_16328 PE=4 SV=1
          Length = 249

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%)

Query: 9   PESMGCASDHMXXXXXXXXXXFVWSCKALVSEIKASHKEMERMLQEQRXTSFQGRLLKHN 68
           P+     SD            +VW+CK L+SEI  + +E++ +L ++   S +G+LL+HN
Sbjct: 174 PKVWVATSDSFHQQAAHGAGAYVWTCKNLISEINDAKEELQELLYDETMYSTKGKLLEHN 233

Query: 69  LDSEVVDALKDLRNKL 84
           LD EV +AL+ L+ +L
Sbjct: 234 LDPEVRNALQALKQQL 249