Jatropha Genome Database

JcCA0294381.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294381.10 + phase: 0 /partial
         (109 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S6U6_RICCO (tr|B9S6U6) Transcription factor, putative OS=Ricin...   117   3e-25
B9H668_POPTR (tr|B9H668) Predicted protein OS=Populus trichocarp...   109   1e-22
C6SYX9_SOYBN (tr|C6SYX9) Putative uncharacterized protein OS=Gly...    80   9e-14
D7MCF1_ARALY (tr|D7MCF1) RWP-RK domain-containing protein OS=Ara...    54   7e-06

>B9S6U6_RICCO (tr|B9S6U6) Transcription factor, putative OS=Ricinus communis
           GN=RCOM_0874100 PE=4 SV=1
          Length = 223

 Score =  117 bits (294), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/66 (86%), Positives = 60/66 (90%)

Query: 44  RNPKLKSIPTLANDLQLIFKLSSRTADGESLQFLSKGKCERARGDCCQSKKSLPVLDQDL 103
           RNPKLKSIPTLANDLQLIFKLS RTAD ESLQF  +GKC+R RGDC QSK+SLPVLDQDL
Sbjct: 3   RNPKLKSIPTLANDLQLIFKLSCRTADEESLQFFFQGKCKRDRGDCYQSKRSLPVLDQDL 62

Query: 104 NCLPYS 109
           NCLPYS
Sbjct: 63  NCLPYS 68


>B9H668_POPTR (tr|B9H668) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_760356 PE=4 SV=1
          Length = 352

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 74/146 (50%), Gaps = 38/146 (26%)

Query: 2   LGRFKVMELFEGQVIGLWQCMFAFHADXXXXXXXXX------------------------ 37
           L RF+V+ELFEGQVIGLW+C+FAFH +                                 
Sbjct: 52  LRRFQVLELFEGQVIGLWRCIFAFHVNNPPHLSHSSFLLSVSRSAFIIIVVEKAHMKLHS 111

Query: 38  --------------XXXXXXRNPKLKSIPTLANDLQLIFKLSSRTADGESLQFLSKGKCE 83
                               RNPKLKSIPTLA D+  I KLS +T + E  +F SK  CE
Sbjct: 112 PTCLRSLFPVWQGNMRQLMRRNPKLKSIPTLAKDIHFILKLSCKTDNEEPSRFSSKEICE 171

Query: 84  RARGDCCQSKKSLPVLDQDLNCLPYS 109
             R +C QSKKSLPVLDQDLNCLP S
Sbjct: 172 VDRDNCHQSKKSLPVLDQDLNCLPNS 197


>C6SYX9_SOYBN (tr|C6SYX9) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 202

 Score = 79.7 bits (195), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 2/108 (1%)

Query: 2   LGRFKVMELFEGQVIGLWQCMFAFHADXXXXXXXXXXXXXXXRNPKLKSIPTLANDLQLI 61
           L + +V E+ EG   G+W C+FAFHAD               RNPKLK IP L +DL +I
Sbjct: 65  LVKSRVSEVCEGHRNGVWLCVFAFHADHTPQFCRIPRLLLVTRNPKLKMIPNLLDDLHMI 124

Query: 62  FKLSSRTADGESLQFLSKGKCERARGDCCQ-SKKSLPVLDQDLNCLPY 108
           +KL+ +  D +  Q  S G+  +   +  Q S+K  PVLDQDLN LPY
Sbjct: 125 YKLNRKEEDRDIAQ-DSTGEERQGHSNNFQPSRKVFPVLDQDLNFLPY 171


>D7MCF1_ARALY (tr|D7MCF1) RWP-RK domain-containing protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_491087 PE=4 SV=1
          Length = 329

 Score = 53.5 bits (127), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 9   ELFEGQVIGLWQCMFAFHADXXXXXXXXXXXXXXXRNPKLKSIPTLANDLQLIFKLSSRT 68
           E+ EG V G W+C+F F                  RNPKL+ IP LAN+L+ I +L+++ 
Sbjct: 61  EISEGSVFGTWRCIFVFR--FTHSLPRFPTLLCLSRNPKLEDIPNLANELKFISELNTKK 118

Query: 69  AD--GESLQFLSKGKC---ERARGDCCQSKKSLPVLDQDLNCLPYS 109
                E  Q     +C   E    D  + +K   VL QDLNCLP S
Sbjct: 119 PSKISEEEQISEDEQCSTDEYYNSDLPKPRKL--VLKQDLNCLPDS 162