Jatropha Genome Database
- JcCA0293801.20
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0293801.20 + phase: 0
(145 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D7SHL4_VITVI (tr|D7SHL4) Whole genome shotgun sequence of line P... 127 6e-28
B9SPJ5_RICCO (tr|B9SPJ5) Putative uncharacterized protein OS=Ric... 102 2e-20
B9HTU7_POPTR (tr|B9HTU7) Predicted protein OS=Populus trichocarp... 98 3e-19
Q9SAD1_ARATH (tr|Q9SAD1) T16B5.15 OS=Arabidopsis thaliana GN=T16... 96 9e-19
Q45GQ7_ARATH (tr|Q45GQ7) Putative uncharacterized protein OS=Ara... 95 3e-18
Q5BQ17_ARATH (tr|Q5BQ17) Putative uncharacterized protein OS=Ara... 94 5e-18
B6TMT3_MAIZE (tr|B6TMT3) Poor homologous synapsis 1 protein OS=Z... 92 1e-17
C0PE43_MAIZE (tr|C0PE43) Putative uncharacterized protein OS=Zea... 92 1e-17
Q6W2J0_MAIZE (tr|Q6W2J0) Poor homologous synapsis 1 protein OS=Z... 92 2e-17
D7KLH5_ARALY (tr|D7KLH5) Predicted protein OS=Arabidopsis lyrata... 92 2e-17
D2J2Y0_WHEAT (tr|D2J2Y0) Poor homologous synapsis 1 protein OS=T... 89 2e-16
D7SYS0_VITVI (tr|D7SYS0) Whole genome shotgun sequence of line P... 57 7e-07
>D7SHL4_VITVI (tr|D7SHL4) Whole genome shotgun sequence of line PN40024,
scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00007676001 PE=4 SV=1
Length = 268
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 88/117 (75%), Gaps = 8/117 (6%)
Query: 17 PVKELWQIHYSRFFSFPRLSSTCAILKPL-SSRCIKKNPHGLHGKWVSSSSMASLHLKND 75
P++ W+I YSRFF++P +SST IL+PL +++ I+ HG WVSS + ASLHL +
Sbjct: 19 PIRYYWEIQYSRFFNYPCISSTSPILRPLPTTKRIRT-----HGTWVSSPT-ASLHLLSH 72
Query: 76 YADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRDSLGQ 132
+ A VLV+S Q K++EEH I+KL+FSWPQVSC++ECP+RGSRV+FASY D +GQ
Sbjct: 73 HFSAE-LVLVISLQEKIHEEHFISKLHFSWPQVSCVNECPVRGSRVIFASYSDCVGQ 128
>B9SPJ5_RICCO (tr|B9SPJ5) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0024520 PE=4 SV=1
Length = 303
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 73/117 (62%), Gaps = 6/117 (5%)
Query: 18 VKELWQ-IHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLHGKWVSS-SSMASLHLKND 75
+KE WQ + YSRF ++P L ST L P S+ C K G G W+SS S ASL ++N
Sbjct: 20 IKEEWQKVSYSRFITYPSLPSTHPSLIPFSNSCRYK---GTRGTWLSSHSPTASLQIRN- 75
Query: 76 YADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRDSLGQ 132
Y VL V G + EEH+++KL+F+WP VSCL P RGSR +F SY+DSLGQ
Sbjct: 76 YKSISHAVLTVCLHGNILEEHYVSKLHFTWPLVSCLSGYPPRGSRSLFVSYKDSLGQ 132
>B9HTU7_POPTR (tr|B9HTU7) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_566029 PE=4 SV=1
Length = 306
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 14/117 (11%)
Query: 22 WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHG-----LHGKWVSS-SSMASLHLKND 75
WQ+ +SRF ++P L STC L PL PH G W+SS S+ ASL L N
Sbjct: 30 WQVTFSRFINYPSLPSTCPSLIPL--------PHNRKCRPTRGTWISSVSATASLQLLNY 81
Query: 76 YADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRDSLGQ 132
++++ +L +S G V EEH++ KL+FSWPQVSC+ P RG+R VF +++DSL +
Sbjct: 82 QSNSKDAILGLSLNGTVLEEHYVWKLHFSWPQVSCVSGYPSRGTRAVFVTFKDSLDE 138
>Q9SAD1_ARATH (tr|Q9SAD1) T16B5.15 OS=Arabidopsis thaliana GN=T16B5.15 PE=4 SV=1
Length = 319
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Query: 1 MAGNQPLQNSKRGILEPVKEL--WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLH 58
MAG+ N +R E E+ W I ++RF +P S +LKPL R + H H
Sbjct: 1 MAGSLTASNRRRNA-EDSSEIYRWTIGFARFVHYPSSPSPHPVLKPLGKR---EQYHSPH 56
Query: 59 GKWVS-SSSMASLHLKNDYADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIR 117
G W+S SSS SLH+ D + +L V KV EEH+I+KLNF+WPQ+SC+ P R
Sbjct: 57 GTWLSASSSTVSLHIV-DELNRSDVILSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSR 115
Query: 118 GSRVVFASYRDSLGQASFLPAIQ 140
GSR +F +Y DS F+ A++
Sbjct: 116 GSRAIFVTYMDSANPLEFVEALK 138
>Q45GQ7_ARATH (tr|Q45GQ7) Putative uncharacterized protein OS=Arabidopsis
thaliana GN=At1g10710 PE=2 SV=1
Length = 349
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 1 MAGNQPLQNSKRGILEPVKEL--WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLH 58
MAG+ N +R E E+ W I ++RF +P S +LKPL R + H H
Sbjct: 1 MAGSLTASNRRRNA-EDSSEIYRWTIGFARFVHYPSSPSPHPVLKPLGKR---EQYHSPH 56
Query: 59 GKWVS-SSSMASLHLKNDYADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIR 117
G W+S SSS SLH+ D + +L V KV EEH+I+KLNF+WPQ+SC+ P R
Sbjct: 57 GTWLSASSSTVSLHIV-DELNRSDVILSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSR 115
Query: 118 GSRVVFASYRDSLGQ 132
GSR +F +Y DS Q
Sbjct: 116 GSRAIFVTYMDSANQ 130
>Q5BQ17_ARATH (tr|Q5BQ17) Putative uncharacterized protein OS=Arabidopsis
thaliana GN=At1g10710 PE=2 SV=1
Length = 410
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 1 MAGNQPLQNSKRGILEPVKEL--WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLH 58
MAG+ N +R E E+ W I ++RF +P S +LKPL R + H H
Sbjct: 1 MAGSLTASNRRRNA-EDSSEIYRWTIGFARFVHYPSSPSPHPVLKPLGKR---EQYHSPH 56
Query: 59 GKWVS-SSSMASLHLKNDYADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIR 117
G W+S SSS SLH+ D + +L V KV EEH+I+KLNF+WPQ+SC+ P R
Sbjct: 57 GTWLSASSSTVSLHIV-DELNRSDVILSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSR 115
Query: 118 GSRVVFASYRDSLGQ 132
GSR +F +Y DS Q
Sbjct: 116 GSRAIFVTYMDSANQ 130
>B6TMT3_MAIZE (tr|B6TMT3) Poor homologous synapsis 1 protein OS=Zea mays PE=2
SV=1
Length = 346
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 22 WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLHGKWVSSSSMASLHLKNDYADARG 81
W++ Y+R+F PR T A P R I + H G W+ +S ASL + + +
Sbjct: 33 WEVEYARYFGTPRRDPTAA--PPSGLRYIMRGVHRHQGTWIPASCPASLCVCHPSLPSAV 90
Query: 82 FVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRDSLGQ 132
VL +S V+EEH ++ LNFSWPQV+C+ +CPIRGSRVVF S+ D Q
Sbjct: 91 PVLTISIGDVVFEEHFVSILNFSWPQVTCVTQCPIRGSRVVFVSFCDKFKQ 141
>C0PE43_MAIZE (tr|C0PE43) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 200
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 22 WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLHGKWVSSSSMASLHLKNDYADARG 81
W++ Y+R+F PR T A P R I + H G W+ +S ASL + + +
Sbjct: 33 WEVEYARYFGTPRRDPTAA--PPSGLRYIMRGVHRHQGTWIPASCPASLCVCHPSLPSAV 90
Query: 82 FVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRDSLGQ 132
VL +S V+EEH ++ LNFSWPQV+C+ +CPIRGSRVVF S+ D Q
Sbjct: 91 PVLTISIGDVVFEEHFVSILNFSWPQVTCVTQCPIRGSRVVFVSFCDKFKQ 141
>Q6W2J0_MAIZE (tr|Q6W2J0) Poor homologous synapsis 1 protein OS=Zea mays GN=phs1
PE=2 SV=1
Length = 347
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 22 WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLHGKWVSSSSMASLHLKNDYADARG 81
W++ Y+R+F PR T A P R I + H G W+ +S ASL + + +
Sbjct: 33 WEVEYARYFGTPRRDPTAA--PPSGLRYIMRGVHRHQGTWIPASCPASLCVCHPSLPSAV 90
Query: 82 FVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRDSLGQ 132
VL +S V+EEH ++ LNFSWPQV+C+ +CPIRGSRVVF S+ D Q
Sbjct: 91 PVLTISIGDVVFEEHFVSILNFSWPQVTCVTQCPIRGSRVVFVSFCDKFKQ 141
>D7KLH5_ARALY (tr|D7KLH5) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_678739 PE=4 SV=1
Length = 412
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 8/135 (5%)
Query: 1 MAGNQPLQNSKRGILEPVKEL--WQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLH 58
MAG+ +++RG E E+ W I ++RF +P S C L+PL R + +PHG
Sbjct: 1 MAGSL-TASTRRGNTEASSEIYRWMIGFARFVHYPSTPSQCPGLRPLGRRELYHSPHGT- 58
Query: 59 GKWVSSSSMASLHLKN-DYADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIR 117
W S+SS ++L L+ D + +L V KV EEH+I+KLNF+WPQ+SC+ P R
Sbjct: 59 --WFSASS-STLSLQMFDEVNRSDVILSVKLGEKVLEEHYISKLNFTWPQMSCVSGFPSR 115
Query: 118 GSRVVFASYRDSLGQ 132
GSR +F +Y DS +
Sbjct: 116 GSRAIFVTYTDSANK 130
>D2J2Y0_WHEAT (tr|D2J2Y0) Poor homologous synapsis 1 protein OS=Triticum aestivum
GN=PHS1 PE=2 SV=1
Length = 356
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 19 KELWQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLHGKWVSSSSMASLHLKNDYAD 78
++ W++ ++R+F+ PR + + P R I + G W+ ++S A+L +
Sbjct: 26 RQRWEVEFARYFAKPRRAPSTP--PPPGLRYISRGKQLHQGTWLLAASPAALCISRPTHS 83
Query: 79 ARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRD 128
VL VS VYEEH+++ LNFSWPQV+C+ ECP+RGSRVVF S+ D
Sbjct: 84 FAARVLTVSIGDVVYEEHYVSILNFSWPQVACVTECPVRGSRVVFVSFCD 133
>D7SYS0_VITVI (tr|D7SYS0) Whole genome shotgun sequence of line PN40024,
scaffold_225.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00004087001 PE=4 SV=1
Length = 282
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 17/119 (14%)
Query: 15 LEPVKELWQIHYSRFFSFPRLSSTCAILKPLSSRCIKKNPHGLHGKWVSSSSMASLHLKN 74
+ +++ W+I +SRFF+ P LSSTC+ + I+K G W+SSSS + L
Sbjct: 17 MAAIRDEWEIQFSRFFNNPALSSTCS-SSTIHPDLIRKTRSLRRGTWISSSSASLQ-LLT 74
Query: 75 DYADARGFVLVVSFQGKVYEEHHIAKLNFSWPQVSCLDECPIRGSRVVFASYRDSLGQA 133
D++ ++ +L+V G+++ VSC+ P RGSRVVF SY+D + Q
Sbjct: 75 DHSTSQA-ILIVRSGGRIH--------------VSCVSGFPARGSRVVFVSYKDCVSQV 118