Jatropha Genome Database

JcCA0283321.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0283321.10 - phase: 0 /partial
         (113 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SR69_RICCO (tr|B9SR69) Solanesyl diphosphate synthase, putativ...   159   9e-38
B9GGY7_POPTR (tr|B9GGY7) Predicted protein OS=Populus trichocarp...   130   3e-29
Q1W5D1_HEVBR (tr|Q1W5D1) Solanesyl diphosphate synthase OS=Hevea...   129   2e-28
B9N7U8_POPTR (tr|B9N7U8) Predicted protein OS=Populus trichocarp...   104   3e-21
A5AYD7_VITVI (tr|A5AYD7) Putative uncharacterized protein OS=Vit...   101   2e-20
Q09IV6_SOLLC (tr|Q09IV6) Solanesyl diphosphate synthase OS=Solan...    63   1e-08
D7KVB8_ARALY (tr|D7KVB8) Solanesyl diphosphate synthase OS=Arabi...    60   7e-08
D7MJN3_ARALY (tr|D7MJN3) Putative uncharacterized protein OS=Ara...    59   2e-07
Q8S948_ARATH (tr|Q8S948) At1g78510 OS=Arabidopsis thaliana GN=At...    56   1e-06
Q0WMS5_ARATH (tr|Q0WMS5) Polyprenyl diphosphate synthase OS=Arab...    56   1e-06
Q76FS5_ARATH (tr|Q76FS5) At1g17050 OS=Arabidopsis thaliana GN=At...    54   5e-06
B9NEQ8_POPTR (tr|B9NEQ8) Predicted protein OS=Populus trichocarp...    54   6e-06

>B9SR69_RICCO (tr|B9SR69) Solanesyl diphosphate synthase, putative OS=Ricinus
           communis GN=RCOM_1182760 PE=3 SV=1
          Length = 420

 Score =  159 bits (402), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/117 (71%), Positives = 90/117 (76%), Gaps = 5/117 (4%)

Query: 1   MMSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAK--FASXXXXXXXXXX---XXX 55
           MMSMTC+S+DFGRT+LDLAACGCSSNASIDRYSVRNYAK  F S                
Sbjct: 1   MMSMTCQSLDFGRTVLDLAACGCSSNASIDRYSVRNYAKPVFRSCNRDYAARRLLCCRRD 60

Query: 56  XXXXXVSSTKTPETLPNGVAQGPVTLLDLKESKGPISLKNLFEVVADDLQTLNHNLR 112
                VSSTKTPET+ NGVA+GP TLLDLKESKGPIS+KNLFEVVADDLQTLN NLR
Sbjct: 61  SARCRVSSTKTPETVLNGVAKGPATLLDLKESKGPISVKNLFEVVADDLQTLNQNLR 117


>B9GGY7_POPTR (tr|B9GGY7) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_550337 PE=3 SV=1
          Length = 420

 Score =  130 bits (328), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 79/118 (66%), Gaps = 6/118 (5%)

Query: 2   MSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXX-----XXXXXXXXXXXX 56
           MSMTC ++DFGR  LDL ACGCSSNASIDRYSVRNYAK  S                   
Sbjct: 1   MSMTCHNLDFGRAKLDLVACGCSSNASIDRYSVRNYAKSVSKSCNRDYGSRRLVCSRRDI 60

Query: 57  XXXXVSSTKTPETLPNGVAQGPVTLLDL-KESKGPISLKNLFEVVADDLQTLNHNLRS 113
               VS TKTPETLP GVA+GP  LL L K+S+  IS+ NLFEVVADDLQTLN NL+S
Sbjct: 61  ARCRVSPTKTPETLPAGVAEGPAGLLKLKKDSRESISITNLFEVVADDLQTLNQNLQS 118


>Q1W5D1_HEVBR (tr|Q1W5D1) Solanesyl diphosphate synthase OS=Hevea brasiliensis
           PE=2 SV=1
          Length = 418

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 79/118 (66%), Gaps = 7/118 (5%)

Query: 1   MMSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXXXXXXXXXXXX-----X 55
           MMSMTC S+DFGRT+ DLAACGCSSNASIDR SVRNYA+                     
Sbjct: 1   MMSMTCYSLDFGRTVFDLAACGCSSNASIDRCSVRNYARSVYRTCNRDYAARRSPYCRRD 60

Query: 56  XXXXXVSSTKTPETLPNGVAQGPVTLLDLKESKGPISLKNLFEVVADDLQTLNHNLRS 113
                VSSTK PETL NGV+Q P   ++LKES+GPISL N+FE VA DLQTLN NLRS
Sbjct: 61  SAWCRVSSTKAPETLLNGVSQDPA--VNLKESRGPISLINVFEAVAGDLQTLNQNLRS 116


>B9N7U8_POPTR (tr|B9N7U8) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_584924 PE=4 SV=1
          Length = 128

 Score =  104 bits (259), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/116 (54%), Positives = 71/116 (61%), Gaps = 6/116 (5%)

Query: 4   MTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXXXXXXXXXXXXX-----XXX 58
           MTCR++DFGR  L L AC  SS+ SIDRYSVRNYAK  S                     
Sbjct: 1   MTCRNLDFGRPKLHLVACSFSSSDSIDRYSVRNYAKSVSKSCNRDYGFRRMVCCRRDIAR 60

Query: 59  XXVSSTKTPETLPNGVAQGPVTLLDL-KESKGPISLKNLFEVVADDLQTLNHNLRS 113
             VSSTKTP+ L   VA+GP  LL+L KES+ P+SL NLFEVVADDL  L  NLRS
Sbjct: 61  CRVSSTKTPQALLARVAEGPTGLLNLKKESREPVSLTNLFEVVADDLLNLKKNLRS 116


>A5AYD7_VITVI (tr|A5AYD7) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_004505 PE=3 SV=1
          Length = 421

 Score =  101 bits (252), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 70/119 (58%), Gaps = 6/119 (5%)

Query: 1   MMSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXXXXXXXXXXXXXXXXXX 60
           MMS+ CRS+DFG T  DL ACGCSSNA  DR+S RN AK  S                  
Sbjct: 1   MMSVACRSLDFGPTGFDLVACGCSSNAQFDRFSRRNSAKGVSKSSSRGYAAKKMVYCQRR 60

Query: 61  VS-----STKTPETLPNGVAQGPVTLLDL-KESKGPISLKNLFEVVADDLQTLNHNLRS 113
           +      ST+ PETL NGV QGP   LD+ KES   +SL + FEVVADDLQ LN NL+S
Sbjct: 61  IGRCRVFSTRAPETLLNGVGQGPPPALDVKKESSSSMSLASFFEVVADDLQILNQNLQS 119


>Q09IV6_SOLLC (tr|Q09IV6) Solanesyl diphosphate synthase OS=Solanum lycopersicum
           GN=SppS PE=3 SV=1
          Length = 398

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 21/115 (18%)

Query: 1   MMSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYA--KFASXXXXXXXXXXXXXXXX 58
           MMS+TC +++ GRT L+  ACGCS +  + R   R ++  K  S                
Sbjct: 1   MMSVTCHNLEIGRTPLESLACGCSFSKGVLRNVSRRFSGKKLLSCRQEFGRI-------- 52

Query: 59  XXVSSTKTPETLPNGVAQGPVTLLDLKESKGPISLKNLFEVVADDLQTLNHNLRS 113
               STK   T       G   +LDL +S+ PISL N+FEVVADDL TLN NL +
Sbjct: 53  ----STKASLT-------GLAPVLDLNKSEKPISLTNVFEVVADDLLTLNKNLHN 96


>D7KVB8_ARALY (tr|D7KVB8) Solanesyl diphosphate synthase OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_895751 PE=4 SV=1
          Length = 406

 Score = 60.1 bits (144), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 53/113 (46%), Gaps = 10/113 (8%)

Query: 2   MSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXXXXXXXXXXXXXXXXXXV 61
           M  +CR+ID G  ++   ACGC       R    + AK                     V
Sbjct: 1   MMTSCRNIDLGTMMM---ACGCG------RRQFPSLAKTVVCKFGSSNRSYGGGILCKAV 51

Query: 62  SSTKTPETLPNGVAQGPVTLLDLKE-SKGPISLKNLFEVVADDLQTLNHNLRS 113
            +     +L NG+ Q      DL++ SK PISL NLFE+VADDLQTLN NL S
Sbjct: 52  PTKSKEISLLNGIGQAQTVTFDLRQASKQPISLVNLFELVADDLQTLNDNLLS 104


>D7MJN3_ARALY (tr|D7MJN3) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_494049 PE=4 SV=1
          Length = 417

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 21/124 (16%)

Query: 2   MSMTCRSIDFGRTLLD-----------LAACGCSSNASIDRYSVRNYAKFASXXXXXXXX 50
           M M+CR+ID G ++LD                CS N  +     R+YA            
Sbjct: 1   MMMSCRNIDLGTSVLDHSCSSSSTSRRFLFGNCSKNVCM--IGGRSYA-------GNLVF 51

Query: 51  XXXXXXXXXXVSSTKTPETLPNGVAQGPVTLLDLK-ESKGPISLKNLFEVVADDLQTLNH 109
                     V +     +L NG+ Q    +L+L+ ES+ PISL+NLFEVVADDLQ LN 
Sbjct: 52  LRRDFGTCRAVPAKSKENSLVNGIGQDKTVMLNLRQESRKPISLENLFEVVADDLQRLND 111

Query: 110 NLRS 113
           NL S
Sbjct: 112 NLLS 115


>Q8S948_ARATH (tr|Q8S948) At1g78510 OS=Arabidopsis thaliana GN=At SPS PE=1 SV=1
          Length = 406

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 2   MSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXXXXXXXXXXXXXXXXXXV 61
           M  +CR+ID G  ++   ACGC       R    + AK                     V
Sbjct: 1   MMTSCRNIDLGTMMM---ACGCG------RRQFPSLAKTVCKFTSSNRSYGGLVGSCKAV 51

Query: 62  SSTKTPETLPNGVAQGPVTLLDLK-ESKGPISLKNLFEVVADDLQTLNHNLRS 113
            +     +L NG+ Q      DLK ESK PISL  LFE+VA DLQTLN NL S
Sbjct: 52  PTKSKEISLLNGIGQSQTVSFDLKQESKQPISLVTLFELVAVDLQTLNDNLLS 104


>Q0WMS5_ARATH (tr|Q0WMS5) Polyprenyl diphosphate synthase OS=Arabidopsis thaliana
           GN=At1g78510 PE=2 SV=1
          Length = 406

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 2   MSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXXXXXXXXXXXXXXXXXXV 61
           M  +CR+ID G  ++   ACGC       R    + AK                     V
Sbjct: 1   MMTSCRNIDLGTMMM---ACGCG------RRQFPSLAKTVCKFTSSNRSYGGLVGSCKAV 51

Query: 62  SSTKTPETLPNGVAQGPVTLLDLK-ESKGPISLKNLFEVVADDLQTLNHNLRS 113
            +     +L NG+ Q      DLK ESK PISL  LFE+VA DLQTLN NL S
Sbjct: 52  PTKSKEISLLNGIGQSQTVSFDLKQESKQPISLVTLFELVAVDLQTLNDNLLS 104


>Q76FS5_ARATH (tr|Q76FS5) At1g17050 OS=Arabidopsis thaliana GN=At-SPS2 PE=2 SV=1
          Length = 417

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 9/118 (7%)

Query: 2   MSMTCRSIDFGRTLLDLAACGCSSNASIDRYSVRNYAKFASXXXXXXXXXXXXXXXXXXV 61
           M M+CR+ID G ++LD +    SS+++  R+   N +K                      
Sbjct: 1   MMMSCRNIDLGTSVLDHSC---SSSSTSRRFLFGNSSKTVCMIGGRSCVGNLVFLRRDLA 57

Query: 62  SSTKTP-----ETLPNGVAQGPVTLLDLK-ESKGPISLKNLFEVVADDLQTLNHNLRS 113
           +    P      +L NG+ Q    +L+L+ ES+ PISL+ LFEVVADDLQ LN NL S
Sbjct: 58  TCRAVPAKSKENSLVNGIGQDQTVMLNLRQESRKPISLETLFEVVADDLQRLNDNLLS 115


>B9NEQ8_POPTR (tr|B9NEQ8) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_595796 PE=4 SV=1
          Length = 55

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 61  VSSTKTPETLPNGVAQGPVTLLDL-KESKGPISLKNLFEVVADDL 104
           VSSTKT ETL  GVA+GP  LL+L KES+ P+SL N+F+VV  DL
Sbjct: 11  VSSTKTLETLLAGVAEGPTVLLNLKKESREPVSLTNMFDVVTADL 55