Jatropha Genome Database

JcCA0282791.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0282791.10 - phase: 0 /partial
         (58 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0LU46_CITSI (tr|C0LU46) Expansin 2 OS=Citrus sinensis GN=EXP2 P...    63   9e-09
Q0Z862_CITSI (tr|Q0Z862) Expansin OS=Citrus sinensis GN=EXP PE=2...    63   9e-09
B7U8J1_ZIZJJ (tr|B7U8J1) Expansin 2 (Fragment) OS=Ziziphus jujub...    61   4e-08
A4GWU5_LITCN (tr|A4GWU5) Expansin OS=Litchi chinensis GN=Exp1 PE...    57   5e-07
B1A2I5_9ROSI (tr|B1A2I5) Expansin 3 OS=Dimocarpus longan GN=Exp3...    57   7e-07
Q71FJ3_MELAB (tr|Q71FJ3) Expansin OS=Melilotus alba GN=Exp1 PE=2...    57   7e-07
Q9SBT1_FRAAN (tr|Q9SBT1) Expansin OS=Fragaria ananassa GN=Exp2 P...    55   2e-06
Q2Q500_GOSHI (tr|Q2Q500) Alpha-expansin 2 OS=Gossypium hirsutum ...    53   1e-05

>C0LU46_CITSI (tr|C0LU46) Expansin 2 OS=Citrus sinensis GN=EXP2 PE=2 SV=1
          Length = 254

 Score = 63.2 bits (152), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 3  IPTFSAATLLLFVLNLCFRGTYGDY-GGWQSGHATFYXXXXXXXXXXXXXXYGNLYS 58
          I   S+  LLLFVLN CFRGT+GDY GGWQSGHATFY              YGNLYS
Sbjct: 4  IAASSSVALLLFVLNFCFRGTFGDYGGGWQSGHATFYGGGDASGTMGGACGYGNLYS 60


>Q0Z862_CITSI (tr|Q0Z862) Expansin OS=Citrus sinensis GN=EXP PE=2 SV=1
          Length = 252

 Score = 63.2 bits (152), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 3  IPTFSAATLLLFVLNLCFRGTYGDY-GGWQSGHATFYXXXXXXXXXXXXXXYGNLYS 58
          I   S+  LLLFVLN CFRGT+GDY GGWQSGHATFY              YGNLYS
Sbjct: 4  IAASSSVALLLFVLNFCFRGTFGDYGGGWQSGHATFYGGGDASGTMGGACGYGNLYS 60


>B7U8J1_ZIZJJ (tr|B7U8J1) Expansin 2 (Fragment) OS=Ziziphus jujuba PE=2 SV=1
          Length = 259

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 34/56 (60%)

Query: 3  IPTFSAATLLLFVLNLCFRGTYGDYGGWQSGHATFYXXXXXXXXXXXXXXYGNLYS 58
          I  +SA +LL  VLNLC RGT+GD GGWQ GHATFY              YGNLYS
Sbjct: 10 ISAYSAISLLFCVLNLCLRGTFGDNGGWQGGHATFYGGGDASGTMGGACGYGNLYS 65


>A4GWU5_LITCN (tr|A4GWU5) Expansin OS=Litchi chinensis GN=Exp1 PE=2 SV=1
          Length = 253

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 1  MAIPTFSAATLLL-FVLNLCFRGTYGDYGGWQSGHATFYXXXXXXXXXXXXXXYGNLYS 58
          MA+  FSA +LL   +++LC +G YGD GGWQSGHATFY              YGNLYS
Sbjct: 1  MAVAAFSAVSLLFSMLISLCLQGVYGDDGGWQSGHATFYGGGDASGTMGGACGYGNLYS 59


>B1A2I5_9ROSI (tr|B1A2I5) Expansin 3 OS=Dimocarpus longan GN=Exp3 PE=2 SV=1
          Length = 253

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 1  MAIPTFSAATLLLFVL-NLCFRGTYGDYGGWQSGHATFYXXXXXXXXXXXXXXYGNLY 57
          MA+  FSA +LL F+L +LC +  YGD GGWQSGHATFY              YGNLY
Sbjct: 1  MAVAAFSAVSLLFFMLISLCLQAVYGDDGGWQSGHATFYGGGDASGTMGGACGYGNLY 58


>Q71FJ3_MELAB (tr|Q71FJ3) Expansin OS=Melilotus alba GN=Exp1 PE=2 SV=1
          Length = 257

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 1  MAIPTFSAATLLLFVLNLCFRGTYGDY-GGWQSGHATFYXXXXXXXXXXXXXXYGNLYS 58
          MAI   S  ++L FVL+LC +GTYGDY GGWQ+ HATFY              YGNLYS
Sbjct: 1  MAIVATSFISILFFVLSLCLKGTYGDYGGGWQNAHATFYGGSDASGTMGGACGYGNLYS 59


>Q9SBT1_FRAAN (tr|Q9SBT1) Expansin OS=Fragaria ananassa GN=Exp2 PE=2 SV=1
          Length = 253

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 1  MAIPTFSAATLLLFVLNLCFRGTYGDYG-GWQSGHATFYXXXXXXXXXXXXXXYGNLYS 58
          MA  +  A TLL+ VLNLC RGTY DYG GW  GHATFY              YGNLYS
Sbjct: 1  MAFTSCLAITLLVSVLNLCIRGTYADYGAGWVGGHATFYGGGDASGTMGGACGYGNLYS 59


>Q2Q500_GOSHI (tr|Q2Q500) Alpha-expansin 2 OS=Gossypium hirsutum PE=2 SV=1
          Length = 252

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 8  AATLLLFVLNLCFRGTYGDY-GGWQSGHATFYXXXXXXXXXXXXXXYGNLYS 58
          +AT LLFV   C RG +GDY GGWQ GHATFY              YGNLYS
Sbjct: 7  SATFLLFVFGFCLRGAFGDYVGGWQGGHATFYGGGDASGTMGGACGYGNLYS 58