Jatropha Genome Database
- JcCA0278051.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0278051.10 - phase: 0 /pseudo/partial
(136 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9S7R3_RICCO (tr|B9S7R3) Pentatricopeptide repeat-containing pro... 107 5e-22
D7TDU0_VITVI (tr|D7TDU0) Whole genome shotgun sequence of line P... 96 1e-18
B9IPG1_POPTR (tr|B9IPG1) Predicted protein (Fragment) OS=Populus... 96 1e-18
A5ARU2_VITVI (tr|A5ARU2) Putative uncharacterized protein OS=Vit... 93 7e-18
D7LXU6_ARALY (tr|D7LXU6) Pentatricopeptide repeat-containing pro... 91 3e-17
C5YI60_SORBI (tr|C5YI60) Putative uncharacterized protein Sb07g0... 78 2e-13
A3BV11_ORYSJ (tr|A3BV11) Putative uncharacterized protein OS=Ory... 78 3e-13
A2YX95_ORYSI (tr|A2YX95) Putative uncharacterized protein OS=Ory... 78 3e-13
C0HFP7_MAIZE (tr|C0HFP7) Putative uncharacterized protein OS=Zea... 78 4e-13
Q7F1E6_ORYSJ (tr|Q7F1E6) Os08g0525500 protein OS=Oryza sativa su... 77 6e-13
>B9S7R3_RICCO (tr|B9S7R3) Pentatricopeptide repeat-containing protein, putative
OS=Ricinus communis GN=RCOM_0611160 PE=4 SV=1
Length = 451
Score = 107 bits (266), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
GMCR GQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGR G+YVEA +
Sbjct: 358 GMCRRGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRGGKYVEAAN 405
>D7TDU0_VITVI (tr|D7TDU0) Whole genome shotgun sequence of line PN40024,
scaffold_43.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00026360001 PE=4 SV=1
Length = 454
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 43/48 (89%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
+CR GQFDDAFCFF +MKVKGHPPNRPVYTMLITMCGR GR+V+A +
Sbjct: 361 ALCRNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAAN 408
>B9IPG1_POPTR (tr|B9IPG1) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_248336 PE=4 SV=1
Length = 422
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
GM R GQFDDAFCFF EMKVKGHPPNRPVYTM+ITMCGR G++VEA +
Sbjct: 330 GMFRRGQFDDAFCFFSEMKVKGHPPNRPVYTMMITMCGRGGKHVEAAN 377
>A5ARU2_VITVI (tr|A5ARU2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_001596 PE=4 SV=1
Length = 356
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 46/57 (80%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGDPHQQHVRLD 74
+CR GQFDDAFCFF +MKVKGHPPNRPVYTMLITMCGR GR+V+A + + L+
Sbjct: 261 ALCRNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELN 317
>D7LXU6_ARALY (tr|D7LXU6) Pentatricopeptide repeat-containing protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488711
PE=4 SV=1
Length = 459
Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
GMCR G FDDAF FF +MKVK HPPNRPVYTMLITMCGR G++V+A +
Sbjct: 366 GMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAAN 413
>C5YI60_SORBI (tr|C5YI60) Putative uncharacterized protein Sb07g026590 OS=Sorghum
bicolor GN=Sb07g026590 PE=4 SV=1
Length = 426
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
+C+ G+F DAF FFG+MK+KGHPPNRPVY ML+ MC R GR+VEA +
Sbjct: 333 ALCKAGRFADAFAFFGDMKMKGHPPNRPVYVMLVKMCVRGGRFVEAAN 380
>A3BV11_ORYSJ (tr|A3BV11) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_28005 PE=4 SV=1
Length = 461
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
+C+ G+F DAF FFG+MK KGHPPNRPVY ML+ MC R GR+VEA +
Sbjct: 368 ALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAAN 415
>A2YX95_ORYSI (tr|A2YX95) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_29963 PE=4 SV=1
Length = 465
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
+C+ G+F DAF FFG+MK KGHPPNRPVY ML+ MC R GR+VEA +
Sbjct: 372 ALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAAN 419
>C0HFP7_MAIZE (tr|C0HFP7) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 322
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
+C+ G+F DAF FFG+MK KGHPPNRPVY ML+ MC R GR+VEA +
Sbjct: 229 ALCKAGRFADAFAFFGDMKTKGHPPNRPVYVMLVKMCVRGGRFVEAAN 276
>Q7F1E6_ORYSJ (tr|Q7F1E6) Os08g0525500 protein OS=Oryza sativa subsp. japonica
GN=OJ1191_A10.118-1 PE=4 SV=1
Length = 182
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 18 GMCRTGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRAGRYVEAGD 65
+C+ G+F DAF FFG+MK KGHPPNRPVY ML+ MC R GR+VEA +
Sbjct: 89 ALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAAN 136