Jatropha Genome Database

JcCA0277981.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0277981.20 + phase: 0 /partial
         (192 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9R8X0_RICCO (tr|B9R8X0) Putative uncharacterized protein OS=Ric...   107   6e-22
D7M3U0_ARALY (tr|D7M3U0) Putative uncharacterized protein OS=Ara...    79   2e-13
Q8L4Q6_ARATH (tr|Q8L4Q6) Putative uncharacterized protein At5g25...    79   2e-13
A5AKX0_VITVI (tr|A5AKX0) Putative uncharacterized protein OS=Vit...    68   6e-10
D7UDJ1_VITVI (tr|D7UDJ1) Whole genome shotgun sequence of line P...    56   2e-06
B9GPK4_POPTR (tr|B9GPK4) Predicted protein OS=Populus trichocarp...    55   3e-06

>B9R8X0_RICCO (tr|B9R8X0) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1602610 PE=4 SV=1
          Length = 742

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 84/143 (58%), Gaps = 7/143 (4%)

Query: 1   MEEDDMDSLFEGMVLFTPSQLVXXXXXXXXXXXXXXXXXNNDSAEISLPPRESESRLDAA 60
           ME DD+DSLFEGMVLFTPSQL                     +A  S    ESE+    A
Sbjct: 1   MEVDDLDSLFEGMVLFTPSQLDDDELQKQQQQQDDVRAS---AASTSDSFNESEAETPPA 57

Query: 61  TATIKTDPPSQHK-VQEPLDENLFSDLTLQTLTTESDSLPTAATLQTATNSRQISRKKKK 119
                T   S++K  QEPLDENLFSDLTLQTL+++S  +P   +    T SR ++RKKK+
Sbjct: 58  CINENTLITSENKPQQEPLDENLFSDLTLQTLSSQSHPIPDTTS---PTTSRHVTRKKKR 114

Query: 120 AASLRIGYGRGGSSIDDLPASPS 142
           AASLRIGY R  SS+DD P  PS
Sbjct: 115 AASLRIGYARDSSSLDDPPYYPS 137


>D7M3U0_ARALY (tr|D7M3U0) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_489361 PE=4 SV=1
          Length = 724

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 72/129 (55%), Gaps = 22/129 (17%)

Query: 4   DDMDSLFEGMVLFTPSQLVXXXXXXXXXXXXXXXXXNNDSAEISLPPRESESRLDAATAT 63
           DDMDSLFEGM LFTP                     +N   ++S PP+   +   AA AT
Sbjct: 5   DDMDSLFEGMELFTP---------------VAELAGDN---KVSSPPQSGNNETKAAEAT 46

Query: 64  IKTDPPSQHKVQEPLDENLFSDLTLQT-LTTESDSLPTAATLQT-ATN-SRQISRKKKKA 120
           + T  PSQ  + E LDENLFSDLT+ T +  + + +    T  + A N  RQ+SR+KK+A
Sbjct: 47  LIT-APSQPDMTEALDENLFSDLTIVTPVQHQPEPIEVVTTHPSPAKNYGRQVSRRKKRA 105

Query: 121 ASLRIGYGR 129
           A LRIGYGR
Sbjct: 106 AGLRIGYGR 114


>Q8L4Q6_ARATH (tr|Q8L4Q6) Putative uncharacterized protein At5g25070
           OS=Arabidopsis thaliana GN=At5g25070 PE=2 SV=1
          Length = 736

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 75/144 (52%), Gaps = 39/144 (27%)

Query: 4   DDMDSLFEGMVLFTPSQLVXXXXXXXXXXXXXXXXXNNDSAEISLPPRESESRLDAATAT 63
           DDMDSLFEGM LFTP+                    + DS ++S PP+  E++  AA AT
Sbjct: 5   DDMDSLFEGMELFTPA-----------------SQFSGDS-KVSSPPQSEETK--AAEAT 44

Query: 64  IKTDPP-------------SQHKVQEPLDENLFSDLTLQTLTTESDSLPTAATLQT---- 106
           + T P              SQ  + E LDENLFSDLT+ T   +    P  A + T    
Sbjct: 45  LITAPSQPDVTEATLITATSQPDITEALDENLFSDLTIVT-PVQHQPEPMEAVITTHQSP 103

Query: 107 ATN-SRQISRKKKKAASLRIGYGR 129
           A N  RQ+SR+KK+AA LRIGYGR
Sbjct: 104 AKNYGRQVSRRKKRAAGLRIGYGR 127


>A5AKX0_VITVI (tr|A5AKX0) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_028558 PE=4 SV=1
          Length = 717

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 77/161 (47%), Gaps = 42/161 (26%)

Query: 1   MEEDDMDSLFEGMVLFTPSQLVXXXXXXXXXXXXXXXXXNNDSAEISLPPRESESRLDAA 60
           +E D+MDSLFEGM+LF PSQ +                 + D  + +  P          
Sbjct: 3   LEADEMDSLFEGMILFNPSQTL----------------ADQDGVDGNCDP---------- 36

Query: 61  TATIKTDPPSQHKVQEPLDENLFSDLTLQTLTTESDSL--PTAATLQTATN-------SR 111
                          +PLDENLFSDLTL T     + L  P+   + T+T        SR
Sbjct: 37  IPLTDASASLSSSSSQPLDENLFSDLTLITPNQFRNPLLDPSPTPISTSTTREETPSVSR 96

Query: 112 QISRKKKKAASLRIGYGRGG----SSIDD--LPASPSEDQN 146
           QISRKKK+ ASLRIGYGR      S +DD  + +SPS+D +
Sbjct: 97  QISRKKKR-ASLRIGYGRDSLNQLSLVDDAEVQSSPSDDSH 136


>D7UDJ1_VITVI (tr|D7UDJ1) Whole genome shotgun sequence of line PN40024,
           scaffold_122.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00013472001 PE=4 SV=1
          Length = 752

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 16/86 (18%)

Query: 76  EPLDENLFSDLTLQTLTTESDSL--PTAATLQTATN-------SRQISRKKKKAASLRIG 126
           +PLDENLFSDLTL T     + L  P+   + T+T        SRQISRKKK+ ASLRIG
Sbjct: 53  QPLDENLFSDLTLITPNQFRNPLLDPSPTPISTSTTREETPSVSRQISRKKKR-ASLRIG 111

Query: 127 YGRGG----SSIDD--LPASPSEDQN 146
           YGR      S +DD  + +SPS+D +
Sbjct: 112 YGRDSLNQLSLVDDAEVQSSPSDDSH 137


>B9GPK4_POPTR (tr|B9GPK4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_852082 PE=4 SV=1
          Length = 737

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 63/140 (45%), Gaps = 21/140 (15%)

Query: 2   EEDDMDSLFEGMVLFTPSQLVXXXXXXXXXXXXXXXXXNNDSAEISLPPRESESRLDAAT 61
           EED MDSLFEGMVLFTP Q                    + S +       S + L  A 
Sbjct: 3   EEDGMDSLFEGMVLFTPHQFTDEQLHRQPVEDPLKHPEESQSDDT--VNNNSNNTLAEAG 60

Query: 62  ATIKTDPPSQH-KVQEPLDENLFSDLTLQTLTTE-----------SDSLPTAATLQTATN 109
           A    +  S H ++ EPLDENLFS  + QTLT             S S  T  T Q ++ 
Sbjct: 61  AGAGAEEASHHQQLSEPLDENLFS--SFQTLTQSQSQSQSQSDPISPSPTTDPTTQISST 118

Query: 110 SRQISRKKKKAASLRIGYGR 129
           SR     KK+ AS RIGY R
Sbjct: 119 SR-----KKRRASFRIGYAR 133