Jatropha Genome Database

JcCA0274451.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0274451.10 - phase: 0 /pseudo/partial
         (87 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9R6T8_RICCO (tr|B9R6T8) Branched-chain amino acid aminotransfer...    64   7e-09
D7SZ21_VITVI (tr|D7SZ21) Whole genome shotgun sequence of line P...    58   4e-07
Q9SNY8_SOLTU (tr|Q9SNY8) Branched-chain-amino-acid aminotransfer...    56   2e-06

>B9R6T8_RICCO (tr|B9R6T8) Branched-chain amino acid aminotransferase, putative
           OS=Ricinus communis GN=RCOM_1585330 PE=3 SV=1
          Length = 440

 Score = 63.5 bits (153), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/42 (64%), Positives = 35/42 (83%)

Query: 46  IGCRLSYKNGGLGTVSQKLSSELTNMQMGLTDDKMGWNMVLK 87
           +G RLSYK GGLGT+SQ+L S L+N+Q G+++DKMGW  VLK
Sbjct: 396 LGERLSYKGGGLGTISQQLCSALSNIQKGISEDKMGWTTVLK 437


>D7SZ21_VITVI (tr|D7SZ21) Whole genome shotgun sequence of line PN40024,
           scaffold_657.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00002251001 PE=4 SV=1
          Length = 108

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 13/66 (19%)

Query: 35  LIDTSFFFCLG-------------IGCRLSYKNGGLGTVSQKLSSELTNMQMGLTDDKMG 81
           L+D    FC G             +G R+SY+N G+G VSQ+L S LT +QMGLT+D M 
Sbjct: 43  LLDADEVFCTGTAVVVSPVGSITYLGKRVSYQNNGIGVVSQQLYSALTRLQMGLTEDVMN 102

Query: 82  WNMVLK 87
           W M LK
Sbjct: 103 WTMELK 108


>Q9SNY8_SOLTU (tr|Q9SNY8) Branched-chain-amino-acid aminotransferase OS=Solanum
           tuberosum GN=BCAT2 PE=2 SV=1
          Length = 377

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 13/66 (19%)

Query: 35  LIDTSFFFCLGI-------------GCRLSYKNGGLGTVSQKLSSELTNMQMGLTDDKMG 81
           L+D    FC G              G R++Y N G+G VSQ+L S LT++QMGL++DKMG
Sbjct: 312 LLDADEVFCTGTAVVVSPVGSITHQGRRVTYGNDGVGLVSQQLYSALTSLQMGLSEDKMG 371

Query: 82  WNMVLK 87
           W + LK
Sbjct: 372 WIVELK 377