Jatropha Genome Database

JcCA0262331.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0262331.10 - phase: 0 
         (78 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RYW3_RICCO (tr|B9RYW3) Putative uncharacterized protein OS=Ric...    65   2e-09
D7TVT4_VITVI (tr|D7TVT4) Whole genome shotgun sequence of line P...    64   4e-09

>B9RYW3_RICCO (tr|B9RYW3) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1314160 PE=4 SV=1
          Length = 77

 Score = 65.1 bits (157), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 1  MKGACTLXXXXXXXXXXXXXXXXXGDRDVAFYPCSNEGSTP-ANGRHRVPGGCA-SLDKE 58
          MKG CTL                 GD DVAF+P SN+GS+    G+      CA S DKE
Sbjct: 1  MKGTCTLVASVLAASTVAFSA---GDSDVAFHPSSNQGSSSSVMGKLGASNACAPSSDKE 57

Query: 59 KFAPRFDGLRFIETLITAHR 78
          KFAPRFDGLRFIETLITAHR
Sbjct: 58 KFAPRFDGLRFIETLITAHR 77


>D7TVT4_VITVI (tr|D7TVT4) Whole genome shotgun sequence of line PN40024,
          scaffold_25.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00019681001 PE=4 SV=1
          Length = 81

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 3/81 (3%)

Query: 1  MKGACTLXXXX-XXXXXXXXXXXXXGDRDVAFYPCSNEGSTPANGRH--RVPGGCASLDK 57
          MKG+C+L                  G RD AF PC  EG   + G++   +    +S DK
Sbjct: 1  MKGSCSLVASVFAASTVALTSSSSSGGRDGAFNPCCKEGLPLSLGKNNTEISHTSSSADK 60

Query: 58 EKFAPRFDGLRFIETLITAHR 78
          EKFAPRFDGLRFIETL+TAHR
Sbjct: 61 EKFAPRFDGLRFIETLVTAHR 81