Jatropha Genome Database
- JcCA0254841.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0254841.10 - phase: 2 /partial/short
(45 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RJQ8_RICCO (tr|B9RJQ8) Isoamylase, putative OS=Ricinus communi... 80 1e-13
D3VW90_MANES (tr|D3VW90) Isoamylase isoform 3 (Fragment) OS=Mani... 70 6e-11
B9GV03_POPTR (tr|B9GV03) Predicted protein OS=Populus trichocarp... 65 3e-09
Q1L5V4_NICLS (tr|Q1L5V4) Isoamylase isoform 3 (Fragment) OS=Nico... 62 2e-08
Q84YG5_SOLTU (tr|Q84YG5) Isoamylase isoform 3 OS=Solanum tuberos... 62 2e-08
Q105A0_PEA (tr|Q105A0) Isoamylase isoform 3 OS=Pisum sativum PE=... 62 2e-08
D7M7P5_ARALY (tr|D7M7P5) ATISA3/ISA3 OS=Arabidopsis lyrata subsp... 60 8e-08
A4PIT0_PHAVU (tr|A4PIT0) Isoamylase-type starch-debranching enzy... 60 9e-08
Q0J118_ORYSJ (tr|Q0J118) Os09g0469400 protein OS=Oryza sativa su... 57 4e-07
Q84UE5_MAIZE (tr|Q84UE5) Isoamylase-type starch debranching enzy... 57 9e-07
B9G434_ORYSJ (tr|B9G434) Putative uncharacterized protein OS=Ory... 57 9e-07
Q6K4A4_ORYSJ (tr|Q6K4A4) Putative isoamylase-type starch debranc... 56 1e-06
B8BCN7_ORYSI (tr|B8BCN7) Putative uncharacterized protein OS=Ory... 56 1e-06
B8XEL7_ORYSI (tr|B8XEL7) Putative isoamylase-type starch debranc... 54 5e-06
B8XEL4_ORYSA (tr|B8XEL4) Putative isoamylase-type starch debranc... 54 5e-06
B8XEL2_ORYSJ (tr|B8XEL2) Putative isoamylase-type starch debranc... 54 5e-06
>B9RJQ8_RICCO (tr|B9RJQ8) Isoamylase, putative OS=Ricinus communis
GN=RCOM_1037500 PE=4 SV=1
Length = 783
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
Query: 1 SKLNMF-MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAKLT 45
SK + F +ADTNLKSPDDFVPEGVPGIGS YNVAPYSSILLEAKLT
Sbjct: 738 SKRSWFRVADTNLKSPDDFVPEGVPGIGSAYNVAPYSSILLEAKLT 783
>D3VW90_MANES (tr|D3VW90) Isoamylase isoform 3 (Fragment) OS=Manihot esculenta
PE=2 SV=1
Length = 548
Score = 70.5 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/39 (84%), Positives = 36/39 (92%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAKLT 45
+ADTNL SP+DFVPEGVPGI + YNVAPYSSILLEAKLT
Sbjct: 510 VADTNLASPEDFVPEGVPGIENSYNVAPYSSILLEAKLT 548
>B9GV03_POPTR (tr|B9GV03) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_754756 PE=4 SV=1
Length = 819
Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTN +SPDDFVP+G+P IGS YNVAP+SSILLEAK
Sbjct: 782 VVDTNFESPDDFVPQGLPRIGSTYNVAPHSSILLEAK 818
>Q1L5V4_NICLS (tr|Q1L5V4) Isoamylase isoform 3 (Fragment) OS=Nicotiana
langsdorffii x Nicotiana sanderae GN=ISO3 PE=2 SV=1
Length = 95
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 31/37 (83%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNLKSPDDFV EG+ GI YNVAPYS+ILLEAK
Sbjct: 58 VVDTNLKSPDDFVTEGIAGISETYNVAPYSAILLEAK 94
>Q84YG5_SOLTU (tr|Q84YG5) Isoamylase isoform 3 OS=Solanum tuberosum PE=2 SV=1
Length = 766
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 31/37 (83%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNLKSPDDFV EGV GI Y+VAPYS+ILLEAK
Sbjct: 729 VVDTNLKSPDDFVTEGVSGISKTYDVAPYSAILLEAK 765
>Q105A0_PEA (tr|Q105A0) Isoamylase isoform 3 OS=Pisum sativum PE=2 SV=1
Length = 736
Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAKL 44
+ DTNL+SPDD V +GVPGIG Y++APYSSILLEAK
Sbjct: 699 VVDTNLESPDDLVLDGVPGIGKTYSIAPYSSILLEAKF 736
>D7M7P5_ARALY (tr|D7M7P5) ATISA3/ISA3 OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_911044 PE=4 SV=1
Length = 766
Score = 60.1 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ADTNL+SPDDFV EGV G+ YNVAP+SSILL++K
Sbjct: 730 VADTNLESPDDFVSEGVAGVAETYNVAPFSSILLQSK 766
>A4PIT0_PHAVU (tr|A4PIT0) Isoamylase-type starch-debranching enzyme 3
OS=Phaseolus vulgaris GN=PvISA3 PE=2 SV=1
Length = 783
Score = 59.7 bits (143), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNLKSP+DFV +GV IG+ YN+APYSSILLEAK
Sbjct: 746 VGDTNLKSPEDFVLDGVHSIGNTYNIAPYSSILLEAK 782
>Q0J118_ORYSJ (tr|Q0J118) Os09g0469400 protein OS=Oryza sativa subsp. japonica
GN=Os09g0469400 PE=2 SV=1
Length = 377
Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP+D VPEGVP G Y +APYSSILL+AK
Sbjct: 340 VVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKAK 376
>Q84UE5_MAIZE (tr|Q84UE5) Isoamylase-type starch debranching enzyme ISO3 OS=Zea
mays GN=iso3 PE=2 SV=1
Length = 694
Score = 56.6 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP D VPEGVP GS Y +APYSSILL+AK
Sbjct: 657 VVDTNLESPKDIVPEGVPFTGSGYRIAPYSSILLKAK 693
>B9G434_ORYSJ (tr|B9G434) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_29702 PE=4 SV=1
Length = 782
Score = 56.6 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP+D VPEGVP G Y +APYSSILL+AK
Sbjct: 745 VVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKAK 781
>Q6K4A4_ORYSJ (tr|Q6K4A4) Putative isoamylase-type starch debranching enzyme
OS=Oryza sativa subsp. japonica GN=OJ1595_D08.13-1 PE=4
SV=1
Length = 700
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP+D VPEGVP G Y +APYSSILL+AK
Sbjct: 663 VVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKAK 699
>B8BCN7_ORYSI (tr|B8BCN7) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_31715 PE=4 SV=1
Length = 653
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP+D VPEGVP G Y +APYSSILL+AK
Sbjct: 616 VVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKAK 652
>B8XEL7_ORYSI (tr|B8XEL7) Putative isoamylase-type starch debranching enzyme
(Fragment) OS=Oryza sativa subsp. indica GN=SDE PE=4
SV=1
Length = 49
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP+D VPEGVP G Y +APYSSILL+AK
Sbjct: 12 VVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKAK 48
>B8XEL4_ORYSA (tr|B8XEL4) Putative isoamylase-type starch debranching enzyme
(Fragment) OS=Oryza sativa GN=SDE PE=4 SV=1
Length = 49
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP+D VPEGVP G Y +APYSSILL+AK
Sbjct: 12 VVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKAK 48
>B8XEL2_ORYSJ (tr|B8XEL2) Putative isoamylase-type starch debranching enzyme
(Fragment) OS=Oryza sativa subsp. japonica GN=SDE PE=4
SV=1
Length = 49
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 7 MADTNLKSPDDFVPEGVPGIGSVYNVAPYSSILLEAK 43
+ DTNL+SP+D VPEGVP G Y +APYSSILL+AK
Sbjct: 12 VVDTNLESPNDIVPEGVPFTGPKYRIAPYSSILLKAK 48