Jatropha Genome Database

JcCA0221281.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0221281.10 + phase: 0 
         (100 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S7I0_RICCO (tr|B9S7I0) Putative uncharacterized protein OS=Ric...    83   1e-14
B9N9U4_POPTR (tr|B9N9U4) Predicted protein OS=Populus trichocarp...    65   3e-09
B9N9U3_POPTR (tr|B9N9U3) Predicted protein OS=Populus trichocarp...    65   3e-09
B9NH00_POPTR (tr|B9NH00) Predicted protein OS=Populus trichocarp...    64   4e-09
B9N9U2_POPTR (tr|B9N9U2) Predicted protein OS=Populus trichocarp...    64   8e-09
B9PAQ4_POPTR (tr|B9PAQ4) Predicted protein OS=Populus trichocarp...    60   7e-08

>B9S7I0_RICCO (tr|B9S7I0) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0607800 PE=4 SV=1
          Length = 104

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 58/101 (57%), Gaps = 15/101 (14%)

Query: 4   SKILVVFLILAFCFEPMLAVRSLDGDEW----LQIQSLARGKVPSSSHSGCTYGLNGKGG 59
           S ILVV ++   C E  LA+R L+GD+W    L+IQSLARGKVPSS  S CTY   G G 
Sbjct: 10  SVILVVSVLFVSCVEQTLAIRPLEGDKWVETNLKIQSLARGKVPSSGSSSCTYVPGGSGR 69

Query: 60  CPNLKLKNFAGQLAHHLPHPTILINAAANFGVASVNKEIQK 100
           CP L   N AG +A           A  NFG+AS  +E QK
Sbjct: 70  CP-LNEMNVAGHVAR----------ATVNFGIASTTEETQK 99


>B9N9U4_POPTR (tr|B9N9U4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_787212 PE=4 SV=1
          Length = 117

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 6   ILVVFLILAFCFEPMLAVRSLDGDEWLQ-----IQSLARGKVPSSSHSGCTY--GLNGKG 58
           I+ V ++   C   +LA R L+G++WL+     IQSL R  VP SS S CT+  GL   G
Sbjct: 13  IIFVAIVFGPCSHQILAARPLEGEQWLKQNLGNIQSLQRAPVPPSSGSPCTHTPGLGSGG 72

Query: 59  GCPNLKLKNFAGQLAHHLPHPTILINAAANFGVASV-NKEIQK 100
            CP L   NFAG +  H   P    +A  NF  ASV N E QK
Sbjct: 73  HCP-LGEMNFAGHIVAHA--PPAFPDAIVNFSTASVTNNETQK 112


>B9N9U3_POPTR (tr|B9N9U3) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_787210 PE=4 SV=1
          Length = 117

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 6   ILVVFLILAFCFEPMLAVRSLDGDEWLQ-----IQSLARGKVPSSSHSGCTY--GLNGKG 58
           I+ V ++   C   +LA R L+G++WL+     IQSL R  VP SS S CT+  GL   G
Sbjct: 13  IIFVAIVFGPCSHQILAARPLEGEQWLKQNLGNIQSLQRAPVPPSSGSPCTHTPGLGSGG 72

Query: 59  GCPNLKLKNFAGQLAHHLPHPTILINAAANFGVASV-NKEIQK 100
            CP L   NFAG +  H   P    +A  NF  ASV N E QK
Sbjct: 73  HCP-LGEMNFAGHIVAHA--PPAFPDAIVNFAAASVTNNETQK 112


>B9NH00_POPTR (tr|B9NH00) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_790759 PE=4 SV=1
          Length = 116

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 12/103 (11%)

Query: 6   ILVVFLILAFCFEPMLAVRSLDGDEWLQ-----IQSLARGKVPSSSHSGCTY--GLNGKG 58
           I+ V ++   C   +LA R L+G++WL+     IQSL RG VP S  S CT+  GL G G
Sbjct: 13  IIFVAIVFGPCSHQILAARPLEGEQWLKQNLGNIQSLQRGPVPPSRGSSCTHTPGL-GSG 71

Query: 59  GCPNLKLKNFAGQLAHHLPHPTILINAAANFGVASV-NKEIQK 100
            CP L   NFAG +  H   P    +A  NF  ASV N E QK
Sbjct: 72  HCP-LGEMNFAGHIVAHA--PPAFPDAIVNFSTASVTNNETQK 111


>B9N9U2_POPTR (tr|B9N9U2) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_787209 PE=4 SV=1
          Length = 105

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 12/103 (11%)

Query: 7   LVVFLILAF--CFEPMLAVRSLDGDEWLQ-----IQSLARGKVPSSSHSGCTY-GLNGKG 58
           + +F+ + F  CF+ +LA R L+G++WL+     IQSL RG +P S  S CT+    G G
Sbjct: 1   MTIFVAIVFGPCFQQILAARPLEGEQWLKQNLGNIQSLRRGPIPPSGGSSCTHIPGRGSG 60

Query: 59  GCPNLKLKNFAGQLAHHLPHPTILINAAANFGVASV-NKEIQK 100
            CP L   NFAG +  H   P    +A   F  ASV N E QK
Sbjct: 61  HCP-LGEMNFAGHIVAHA--PPAFPDAIVKFAAASVTNNETQK 100


>B9PAQ4_POPTR (tr|B9PAQ4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_794493 PE=4 SV=1
          Length = 116

 Score = 60.1 bits (144), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 12/108 (11%)

Query: 2   DRSKILVVFLILAF--CFEPMLAVRSLDGDEWLQ-----IQSLARGKVPSSSHSGCTYGL 54
           +R   +++F+ + F  C   +LA R ++G++WL+     IQSL R  VP S  S CT+  
Sbjct: 7   NRCLTMIIFVAIVFGPCSHQILAARPIEGEQWLKQNLGNIQSLQRAPVPPSRGSSCTHTP 66

Query: 55  -NGKGGCPNLKLKNFAGQLAHHLPHPTILINAAANFGVASV-NKEIQK 100
             G G CP L   NFAG +  H   P    +A   F  ASV N E QK
Sbjct: 67  GRGSGHCP-LGEMNFAGHIVAHA--PPAFPDAIVKFAAASVTNNETQK 111