Jatropha Genome Database

JcCA0216521.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0216521.20 + phase: 0 /pseudo/partial
         (64 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B8A7G5_ORYSI (tr|B8A7G5) Putative uncharacterized protein OS=Ory...    72   2e-11
Q5JNK9_ORYSJ (tr|Q5JNK9) Putative uncharacterized protein P0638D...    72   2e-11

>B8A7G5_ORYSI (tr|B8A7G5) Putative uncharacterized protein OS=Oryza sativa
          subsp. indica GN=OsI_01737 PE=4 SV=1
          Length = 109

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 43/62 (69%)

Query: 1  MATCRRVPRTPIAMEVAAITAGPVKNLTAIANVATDFPHATIFGCKAMNKPVYAIIYTLN 60
          MAT R VPR P A+E+AA+ AGPV+NLTA+ANVAT F HA I  C AMN P     Y  +
Sbjct: 1  MATWRSVPRRPTALEMAAMMAGPVRNLTAMANVATLFRHAMIRSCSAMNSPASEETYVTS 60

Query: 61 SN 62
          S+
Sbjct: 61 SD 62


>Q5JNK9_ORYSJ (tr|Q5JNK9) Putative uncharacterized protein P0638D12.24 OS=Oryza
          sativa subsp. japonica GN=P0638D12.24 PE=4 SV=1
          Length = 70

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 40/51 (78%)

Query: 1  MATCRRVPRTPIAMEVAAITAGPVKNLTAIANVATDFPHATIFGCKAMNKP 51
          MAT R +PR P AME+AA+TAGPV+NLT +ANVAT F HA I GC AMN P
Sbjct: 1  MATWRSLPRRPTAMEMAAMTAGPVRNLTVMANVATLFRHAMIRGCSAMNSP 51