Jatropha Genome Database

JcCA0154181.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154181.10 - phase: 0 /partial
         (96 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SI18_RICCO (tr|B9SI18) ATP-binding cassette transporter, putat...   139   1e-31
B9GII3_POPTR (tr|B9GII3) Predicted protein OS=Populus trichocarp...   111   2e-23
D7LLE6_ARALY (tr|D7LLE6) ATPDR3/PDR3 OS=Arabidopsis lyrata subsp...   103   4e-21
D7SJY2_VITVI (tr|D7SJY2) Whole genome shotgun sequence of line P...    84   6e-15
A5ARE8_VITVI (tr|A5ARE8) Putative uncharacterized protein OS=Vit...    79   2e-13

>B9SI18_RICCO (tr|B9SI18) ATP-binding cassette transporter, putative OS=Ricinus
          communis GN=RCOM_0612210 PE=4 SV=1
          Length = 1433

 Score =  139 bits (349), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 83/96 (86%)

Query: 1  MAAALNGTEYLEVQIDPGRESFARPSNADSVREDEAELQWQAIARLPSQKRSNFSLLRRS 60
          MAAA++GTEYLE+QID  RESFAR SNA+SV+EDE EL W+AI+RLPSQ+R NF+LLRRS
Sbjct: 1  MAAAMDGTEYLELQIDHFRESFARASNAESVQEDEDELLWEAISRLPSQRRGNFALLRRS 60

Query: 61 STDYSHGGEESRMEMIDVTKLDRANRELVVRKALAT 96
          +++Y+  G   R E IDVT+LDRANRELVV+KALAT
Sbjct: 61 ASEYAEDGSGKRTETIDVTRLDRANRELVVKKALAT 96


>B9GII3_POPTR (tr|B9GII3) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_842486 PE=4 SV=1
          Length = 1432

 Score =  111 bits (278), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/97 (61%), Positives = 77/97 (79%), Gaps = 1/97 (1%)

Query: 1  MAAALNGTEYLEVQIDPGRESFARPSNADSVREDEAELQWQAIARLPSQKRSNFSLLRRS 60
          MAAA NG+E+ E+ IDP RESF+RPSNA+++ EDE EL W+AI+RLPS KR NF+++R+S
Sbjct: 1  MAAASNGSEFFELDIDPVRESFSRPSNAEALEEDEDELVWEAISRLPSNKRGNFAVMRKS 60

Query: 61 STDYSH-GGEESRMEMIDVTKLDRANRELVVRKALAT 96
           ++Y   GG   R EMIDV +LDR  RELVV+KALAT
Sbjct: 61 PSEYDRSGGYGEREEMIDVRRLDRHKRELVVKKALAT 97


>D7LLE6_ARALY (tr|D7LLE6) ATPDR3/PDR3 OS=Arabidopsis lyrata subsp. lyrata
          GN=ARALYDRAFT_481901 PE=4 SV=1
          Length = 1428

 Score =  103 bits (258), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 74/99 (74%), Gaps = 3/99 (3%)

Query: 1  MAAALNGTEYLEVQIDPGRESFARPSNADSVREDEAELQWQAIARLPSQKR-SNFSLLRR 59
          MAAA NG+EY E  ++ GRESFARPSNAD+V +DE +L+W AI RLPSQ++ S  ++L R
Sbjct: 1  MAAASNGSEYFEFDVETGRESFARPSNADTVEQDEEDLRWAAIGRLPSQRQGSQSAILLR 60

Query: 60 SSTDYSHGG--EESRMEMIDVTKLDRANRELVVRKALAT 96
          S T     G  + + ++ IDV KLDRA+RE++VR+ALAT
Sbjct: 61 SQTQTQTSGYADGNVVQTIDVKKLDRADREMLVRQALAT 99


>D7SJY2_VITVI (tr|D7SJY2) Whole genome shotgun sequence of line PN40024,
          scaffold_4.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00024743001 PE=4 SV=1
          Length = 1483

 Score = 83.6 bits (205), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/77 (55%), Positives = 55/77 (71%), Gaps = 4/77 (5%)

Query: 20 ESFARPSNADSVREDEAELQWQAIARLPSQKRSNFSLLRRSSTDYSHGGEESRMEMIDVT 79
          +SF+R S  + V  DE EL W+AI RLPSQKR+NF+L++RS+   S    E R + IDV 
Sbjct: 6  DSFSR-SRREEVEADEDELMWEAILRLPSQKRTNFALMKRSA---SEAEGEQRTDTIDVR 61

Query: 80 KLDRANRELVVRKALAT 96
          KLDR NR+LVV+KA AT
Sbjct: 62 KLDRLNRQLVVKKAFAT 78


>A5ARE8_VITVI (tr|A5ARE8) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_008791 PE=4 SV=1
          Length = 284

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 67/94 (71%), Gaps = 4/94 (4%)

Query: 3  AALNGTEYLEVQIDPGRESFARPSNADSVREDEAELQWQAIARLPSQKRSNFSLLRRSST 62
          AA NG+EY E ++    +SF+R    + V  DE EL W+AI RLPSQKR+NF+L++RS++
Sbjct: 2  AASNGSEYFEFEMGSRNDSFSR-XRREEVERDEDELMWEAILRLPSQKRTNFALMKRSAS 60

Query: 63 DYSHGGEESRMEMIDVTKLDRANRELVVRKALAT 96
          + + G  E R + IDV KLDR NR+LVV+KA AT
Sbjct: 61 E-AEG--EQRTDTIDVRKLDRLNRQLVVKKAFAT 91