Jatropha Genome Database

JcCA0152731.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152731.10 + phase: 0 /partial
         (120 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D3XFF8_THECC (tr|D3XFF8) TT2 like MYB transcriptoin factor OS=Th...    71   5e-11
B9I900_POPTR (tr|B9I900) Predicted protein OS=Populus trichocarp...    61   5e-08
B9GR37_POPTR (tr|B9GR37) Predicted protein OS=Populus trichocarp...    56   1e-06

>D3XFF8_THECC (tr|D3XFF8) TT2 like MYB transcriptoin factor OS=Theobroma cacao
           GN=MYBPA PE=2 SV=1
          Length = 287

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 61/126 (48%), Gaps = 6/126 (4%)

Query: 1   EPEKPKIHLPIPVRFTCLSLPRNDSF-ECN--SLCXXXXXXXXXXXXXXXXNNWFNFKEN 57
           EPE+PK+HLP PVR T  SLPRNDSF +CN  S                    W +   +
Sbjct: 162 EPEEPKVHLPKPVRVTSFSLPRNDSFDQCNTFSTVSSSQGGEGGLGTEVVQGPWSDNVND 221

Query: 58  DDHGISFLVGDVGHEFVNGTD---HDDLAPTESGNXXXXXXXXXXXXXTDDRDQVKLDSF 114
           D++G  FL     H FVNG+D      +  ++  N               + DQV+LDSF
Sbjct: 222 DENGTGFLAAYDDHGFVNGSDFECQSHVPASDDDNSLEKLYEEYLQLLKTNDDQVQLDSF 281

Query: 115 AESLLL 120
           AESLL+
Sbjct: 282 AESLLI 287


>B9I900_POPTR (tr|B9I900) Predicted protein OS=Populus trichocarpa GN=MYB201 PE=4
           SV=1
          Length = 270

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 61/121 (50%), Gaps = 17/121 (14%)

Query: 3   EKPKIHLPIPVRFTCLSLPRNDSFECNSLCXXXXXXXXXXXXXXXXNNWFNFKENDDHGI 62
           EK K+HLP PVRFT L LPRNDSFE N++                  +  +F   D    
Sbjct: 164 EKHKVHLPKPVRFTSLPLPRNDSFESNTIT----------ISPSQGRDQGSFGTGD---- 209

Query: 63  SFLVGDV-GHEFVNGTDHDDLAPTESGNX-XXXXXXXXXXXXTDDR-DQVKLDSFAESLL 119
           SFLVGD   +  VNG+D +  +P  + N               DDR DQV LDSFA+SLL
Sbjct: 210 SFLVGDNDRYGLVNGSDLECQSPVPTTNTLEKLYEEYLQLLEIDDRQDQVLLDSFADSLL 269

Query: 120 L 120
           +
Sbjct: 270 V 270


>B9GR37_POPTR (tr|B9GR37) Predicted protein OS=Populus trichocarpa GN=MYB115 PE=4
           SV=1
          Length = 285

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 62/125 (49%), Gaps = 10/125 (8%)

Query: 3   EKPKIHLPIPVRFTCLSLPRNDSFECNSLCXXXXXXXXXX-----XXXXXXNNWFNFKEN 57
           EK K+HLP  VRF  LSLPRNDSF  ++                        +W NFK+ 
Sbjct: 164 EKHKVHLPKAVRFASLSLPRNDSFASSTTTSLSPSQGRDQGYCFGTELAVDVSWSNFKDC 223

Query: 58  DDHGISFLVGDVGHEFVNGTDHD--DLAPTESGNXXXXXXXXXXXXXTDDRDQVKLDSFA 115
           D+ G++F VGDV  +  NG+D +   L PT                  D +DQV+L+SFA
Sbjct: 224 DN-GVAFFVGDV--DLDNGSDLECQSLLPTTDTLEKLYEEYLQVLNTNDHQDQVELNSFA 280

Query: 116 ESLLL 120
           ESLL+
Sbjct: 281 ESLLV 285