Jatropha Genome Database

JcCA0148271.30
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0148271.30 + phase: 0 
         (136 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9T2X9_RICCO (tr|B9T2X9) Pentatricopeptide repeat-containing pro...   155   1e-36
D7LWA0_ARALY (tr|D7LWA0) Pentatricopeptide repeat-containing pro...   146   8e-34
B9GI17_POPTR (tr|B9GI17) Predicted protein OS=Populus trichocarp...   138   2e-31
Q3EAH8_ARATH (tr|Q3EAH8) Putative uncharacterized protein At3g59...   128   2e-28
Q6Z1D0_ORYSJ (tr|Q6Z1D0) Os08g0191900 protein OS=Oryza sativa su...   127   6e-28
A2YS10_ORYSI (tr|A2YS10) Putative uncharacterized protein OS=Ory...   126   6e-28
C5YIC9_SORBI (tr|C5YIC9) Putative uncharacterized protein Sb07g0...   122   2e-26

>B9T2X9_RICCO (tr|B9T2X9) Pentatricopeptide repeat-containing protein, putative
           OS=Ricinus communis GN=RCOM_0158910 PE=4 SV=1
          Length = 553

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/134 (61%), Positives = 99/134 (73%), Gaps = 8/134 (5%)

Query: 1   MAPALYFRPCISPPSTNWSHPKMLVNPLNAIPKIYXXXXXXXXXXXLEVVAKGMLSQRKF 60
           MAP L F+P ISP STNW  PK++VN  NA+               + VVA+GMLS RKF
Sbjct: 1   MAPTLSFKPYISPASTNWRQPKVVVNS-NAV------NWNGKRRVEVTVVARGMLSPRKF 53

Query: 61  MQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQNQDLPKDLVLGTLV 120
           +Q+R+KVEVFKD ADEA  KNWRG+M+QIEET S V+VLKSK I  NQ LPK LVLGTLV
Sbjct: 54  LQRRKKVEVFKDEADEAYHKNWRGLMRQIEETDSPVSVLKSKLIN-NQSLPKHLVLGTLV 112

Query: 121 RFQQLKKWNLVSEV 134
           RF+QLKKW+LVS++
Sbjct: 113 RFKQLKKWHLVSQI 126


>D7LWA0_ARALY (tr|D7LWA0) Pentatricopeptide repeat-containing protein
           OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907402
           PE=4 SV=1
          Length = 582

 Score =  146 bits (368), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/134 (55%), Positives = 93/134 (69%), Gaps = 9/134 (6%)

Query: 1   MAPALYFRPCISPPSTNWSHPKMLVNPLNAIPKIYXXXXXXXXXXXLEVVAKGMLSQRKF 60
           M+ A+ F+P +S P++N S  K+  N +N   KI              VV  GML+ RKF
Sbjct: 1   MSQAVIFKPFVSVPTSNHSQRKLHNNIINVGVKI---------QNRFRVVCMGMLAPRKF 51

Query: 61  MQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQNQDLPKDLVLGTLV 120
           +QKRRK+EVFKDAADE DQK WRG+M +IE TGSAV VL+  R   +Q LP+DLVLGTLV
Sbjct: 52  LQKRRKIEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYRTDGDQGLPRDLVLGTLV 111

Query: 121 RFQQLKKWNLVSEV 134
           RF+QLKKWNLVSE+
Sbjct: 112 RFKQLKKWNLVSEI 125


>B9GI17_POPTR (tr|B9GI17) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_1067802 PE=4 SV=1
          Length = 575

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 88/112 (78%), Gaps = 10/112 (8%)

Query: 23  MLVNPLNAIPKIYXXXXXXXXXXXLEVVAKGMLSQRKFMQKRRKVEVFKDAADEADQKNW 82
           M  NP  A  KI+           LEVV+ GMLS RKF+QKRRKVEVFKDA+DEADQKNW
Sbjct: 1   MHANPFIANIKIHRR---------LEVVSMGMLSPRKFLQKRRKVEVFKDASDEADQKNW 51

Query: 83  RGVMKQIEETGSAVAVLKSKRITQNQDLPKDLVLGTLVRFQQLKKWNLVSEV 134
           R +MKQIE+TGSAV+VL+ +RI ++  LP+DLVLGTLVRF+QLKKW+LVSE+
Sbjct: 52  RRLMKQIEDTGSAVSVLRRERIKKD-GLPRDLVLGTLVRFKQLKKWDLVSEI 102


>Q3EAH8_ARATH (tr|Q3EAH8) Putative uncharacterized protein At3g59040.2
           OS=Arabidopsis thaliana GN=At3g59040 PE=4 SV=1
          Length = 590

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 72/88 (81%)

Query: 47  LEVVAKGMLSQRKFMQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQ 106
             VV  GML+ RKF+QKRRK+EVFKDAADE DQK WRG+M +IE TGSAV VL+  +   
Sbjct: 45  FRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDG 104

Query: 107 NQDLPKDLVLGTLVRFQQLKKWNLVSEV 134
           +Q LP+DLVLGTLVRF+QLKKWNLVSE+
Sbjct: 105 DQGLPRDLVLGTLVRFKQLKKWNLVSEI 132


>Q6Z1D0_ORYSJ (tr|Q6Z1D0) Os08g0191900 protein OS=Oryza sativa subsp. japonica
           GN=OSJNBa0056O06.11 PE=2 SV=1
          Length = 609

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 79/88 (89%), Gaps = 1/88 (1%)

Query: 47  LEVVAKGMLSQRKFMQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQ 106
           LEVV  GML+ RKFMQK++K EV+KDAADEA+QKNWR +M++IEE+GSAV++LK++R ++
Sbjct: 42  LEVVCHGMLTTRKFMQKKKKEEVYKDAADEAEQKNWRMMMREIEESGSAVSILKTQR-SK 100

Query: 107 NQDLPKDLVLGTLVRFQQLKKWNLVSEV 134
            + LP+D VLGTL+RF+QLKKWNLVSE+
Sbjct: 101 KEPLPRDAVLGTLMRFKQLKKWNLVSEI 128


>A2YS10_ORYSI (tr|A2YS10) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_28108 PE=4 SV=1
          Length = 608

 Score =  126 bits (317), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 79/88 (89%), Gaps = 1/88 (1%)

Query: 47  LEVVAKGMLSQRKFMQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQ 106
           LEVV  GML+ RKFMQK++K EV+KDAADEA+QKNWR +M++IEE+GSAV++LK++R ++
Sbjct: 42  LEVVCHGMLTTRKFMQKKKKEEVYKDAADEAEQKNWRMMMREIEESGSAVSILKTQR-SK 100

Query: 107 NQDLPKDLVLGTLVRFQQLKKWNLVSEV 134
            + LP+D VLGTL+RF+QLKKWNLVSE+
Sbjct: 101 KEPLPRDAVLGTLMRFKQLKKWNLVSEI 128


>C5YIC9_SORBI (tr|C5YIC9) Putative uncharacterized protein Sb07g005470 OS=Sorghum
           bicolor GN=Sb07g005470 PE=4 SV=1
          Length = 602

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/88 (64%), Positives = 76/88 (86%), Gaps = 1/88 (1%)

Query: 47  LEVVAKGMLSQRKFMQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQ 106
           LEVV +GML+ RKFMQ+++K EVFKDAADEA+Q NWR +M++IEE GSAV +LK++R + 
Sbjct: 40  LEVVCRGMLATRKFMQRKKKEEVFKDAADEAEQMNWRRMMREIEEAGSAVPILKTQR-SG 98

Query: 107 NQDLPKDLVLGTLVRFQQLKKWNLVSEV 134
              LP+D++LGTLVRF+QLKKWN+VSE+
Sbjct: 99  KGPLPRDVILGTLVRFKQLKKWNIVSEI 126