Jatropha Genome Database

JcCA0146401.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146401.20 + phase: 0 
         (193 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9HXF1_POPTR (tr|B9HXF1) Predicted protein OS=Populus trichocarp...   100   9e-20
B9RTA3_RICCO (tr|B9RTA3) Putative uncharacterized protein OS=Ric...    78   4e-13
B9N019_POPTR (tr|B9N019) Predicted protein OS=Populus trichocarp...    69   3e-10
D7SYA2_VITVI (tr|D7SYA2) Whole genome shotgun sequence of line P...    65   4e-09
A5AMS3_VITVI (tr|A5AMS3) Putative uncharacterized protein OS=Vit...    64   6e-09

>B9HXF1_POPTR (tr|B9HXF1) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_768587 PE=4 SV=1
          Length = 189

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 77/168 (45%), Gaps = 9/168 (5%)

Query: 1   MDIFLAADGVTIATQQGVGIANSHL-QRQNLISNCNLTLSARVLQTYTVIFDALAPPPVK 59
           MD+ L AD +TIATQQ +G ANS L  RQN I+     L+ +  Q   V+ DALAPPPVK
Sbjct: 1   MDVSLIADTLTIATQQTLGSANSFLLHRQNCIN-----LADQSSQICVVVVDALAPPPVK 55

Query: 60  PNSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 119
             +                                                        W
Sbjct: 56  SKTSRRTLLRKRRRTRRRSQTDGDSGGFGEEYGFFCGGDGLFGGGGGGDGGGFGGGGRGW 115

Query: 120 NFDRFGGQNWDEXXXXXXXR---FAYGFVYEVIYWIALSTCMHFAFEK 164
           NFD+FGG +WDE       R   FAYGFVYEVIYWIALS C+HFAF+K
Sbjct: 116 NFDKFGGHDWDEPSWWFSSRSSGFAYGFVYEVIYWIALSNCVHFAFKK 163


>B9RTA3_RICCO (tr|B9RTA3) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0682480 PE=4 SV=1
          Length = 181

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 37/47 (78%), Gaps = 1/47 (2%)

Query: 119 WNFDRFGGQNWDEXXXXXXX-RFAYGFVYEVIYWIALSTCMHFAFEK 164
           WNFD+FGG NWDE        +FAYGFVYEVIYWIALS C+HFAFEK
Sbjct: 114 WNFDKFGGHNWDESSSWSSSSKFAYGFVYEVIYWIALSNCLHFAFEK 160



 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 41/60 (68%), Gaps = 9/60 (15%)

Query: 1  MDIFLAADGVTIATQQ-GVGIANSHLQRQNLISNCNLTLSARVLQTYTVIFDALAPPPVK 59
          MDI L AD +T+ATQQ G+G A S L RQN ISN NL       QT  VIFDA+APPPVK
Sbjct: 1  MDISLIADPITLATQQQGLGFAISLLHRQN-ISNTNL-------QTSAVIFDAIAPPPVK 52


>B9N019_POPTR (tr|B9N019) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_596093 PE=4 SV=1
          Length = 180

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 3/48 (6%)

Query: 120 NFDRFGGQNWDEXXXXXXX---RFAYGFVYEVIYWIALSTCMHFAFEK 164
           NFD+FGG +WDE           FAYGFVYEVIYWIALS C+HFAF+K
Sbjct: 107 NFDKFGGHDWDESSGWYSSRSSDFAYGFVYEVIYWIALSNCVHFAFKK 154


>D7SYA2_VITVI (tr|D7SYA2) Whole genome shotgun sequence of line PN40024,
           scaffold_77.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00035097001 PE=4 SV=1
          Length = 189

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)

Query: 119 WNFDRFGGQNWDEXXXXXXXRFAYGFVYEVIYWIALSTCMHFAFEK 164
           WNFDRFGG NWDE         A+ FVYEVI WIALS C+HFAF++
Sbjct: 120 WNFDRFGGHNWDESPSSSSDP-AFDFVYEVICWIALSNCVHFAFKR 164


>A5AMS3_VITVI (tr|A5AMS3) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_012018 PE=4 SV=1
          Length = 347

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)

Query: 119 WNFDRFGGQNWDEXXXXXXXRFAYGFVYEVIYWIALSTCMHFAFEK 164
           WNFDRFGG NWDE         A+ FVYEVI WIALS C+HFAF++
Sbjct: 157 WNFDRFGGHNWDESPSSSSDP-AFDFVYEVICWIALSNCVHFAFKR 201