Jatropha Genome Database

JcCA0145841.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0145841.10 - phase: 0 /partial
         (86 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SIA8_RICCO (tr|B9SIA8) Putative uncharacterized protein OS=Ric...    81   4e-14
B9IPR7_POPTR (tr|B9IPR7) Predicted protein OS=Populus trichocarp...    62   2e-08
D7L1A3_ARALY (tr|D7L1A3) Putative uncharacterized protein OS=Ara...    56   1e-06
Q0WS93_ARATH (tr|Q0WS93) Putative auxin-independent growth promo...    56   1e-06
Q9SRV8_ARATH (tr|Q9SRV8) Putative auxin-independent growth promo...    56   1e-06
D7T466_VITVI (tr|D7T466) Whole genome shotgun sequence of line P...    54   4e-06

>B9SIA8_RICCO (tr|B9SIA8) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1322500 PE=4 SV=1
          Length = 615

 Score = 80.9 bits (198), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 5/65 (7%)

Query: 23 VIHLSITKFSGSSLITY-APKDSGINFPPLADTQSVRYIRNKRLWGVVKPLQSLQPYANP 81
          VIHLSITKFS S ++ Y + KD G+  PP     S++  RN +LWGVVKPLQSLQPYANP
Sbjct: 26 VIHLSITKFSSSGILPYNSEKDVGLEIPP----SSIKNFRNPKLWGVVKPLQSLQPYANP 81

Query: 82 RSNYP 86
          RS+YP
Sbjct: 82 RSSYP 86


>B9IPR7_POPTR (tr|B9IPR7) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_573940 PE=4 SV=1
          Length = 652

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 3/65 (4%)

Query: 23 VIHLSITKFSGS-SLITYAPKDSGINFPPLADTQSVRYIRNKRLWGVVKPLQSLQPYANP 81
          VIHLSITK SG  SL +      G N  P+      R +RNKR WG VK L+SLQPYANP
Sbjct: 23 VIHLSITKLSGPYSLQSTLMPAIGFNLTPIFGGD--RAVRNKRSWGHVKSLKSLQPYANP 80

Query: 82 RSNYP 86
          RS+YP
Sbjct: 81 RSSYP 85


>D7L1A3_ARALY (tr|D7L1A3) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_477634 PE=4 SV=1
          Length = 656

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 23 VIHLSITKFSGSSLITYAPKDSGINFPPLADTQSVRYIRNKRLWGVVKPLQSLQPYANPR 82
          V+HLS+TK SG  L   A  +   +F  L   Q     RNK LW  VK L++LQPYANPR
Sbjct: 23 VVHLSMTKSSGVQLAYSARDNLWQDFDSLLGAQD---FRNKHLWRPVKSLETLQPYANPR 79

Query: 83 SNYP 86
          ++YP
Sbjct: 80 NSYP 83


>Q0WS93_ARATH (tr|Q0WS93) Putative auxin-independent growth promoter protein
          OS=Arabidopsis thaliana GN=At3g03810 PE=2 SV=1
          Length = 656

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 23 VIHLSITKFSGSSLITYAPKDSGINFPPLADTQSVRYIRNKRLWGVVKPLQSLQPYANPR 82
          V+HLS+TK SG  L   A  +   +F  L   Q     RNK LW  VK L++LQPYANPR
Sbjct: 23 VVHLSMTKSSGVQLAYSARDNLWQDFDSLLGAQD---FRNKHLWRPVKSLETLQPYANPR 79

Query: 83 SNYP 86
          ++YP
Sbjct: 80 NSYP 83


>Q9SRV8_ARATH (tr|Q9SRV8) Putative auxin-independent growth promoter protein
          OS=Arabidopsis thaliana GN=F20H23.17 PE=4 SV=1
          Length = 638

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 23 VIHLSITKFSGSSLITYAPKDSGINFPPLADTQSVRYIRNKRLWGVVKPLQSLQPYANPR 82
          V+HLS+TK SG  L   A  +   +F  L   Q     RNK LW  VK L++LQPYANPR
Sbjct: 5  VVHLSMTKSSGVQLAYSARDNLWQDFDSLLGAQD---FRNKHLWRPVKSLETLQPYANPR 61

Query: 83 SNYP 86
          ++YP
Sbjct: 62 NSYP 65


>D7T466_VITVI (tr|D7T466) Whole genome shotgun sequence of line PN40024,
          scaffold_18.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00016152001 PE=4 SV=1
          Length = 663

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/26 (84%), Positives = 26/26 (100%)

Query: 61 RNKRLWGVVKPLQSLQPYANPRSNYP 86
          R+K+LWGVVKPL+SLQPYANPRS+YP
Sbjct: 57 RHKKLWGVVKPLESLQPYANPRSSYP 82