Jatropha Genome Database

JcCA0140901.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0140901.10 + phase: 0 /pseudo/partial
         (99 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7SM23_VITVI (tr|D7SM23) Whole genome shotgun sequence of line P...   103   5e-21
A5BGR6_VITVI (tr|A5BGR6) Putative uncharacterized protein OS=Vit...   103   6e-21
B9SKF5_RICCO (tr|B9SKF5) Casein kinase II beta chain, putative O...    96   9e-19
B9MV44_POPTR (tr|B9MV44) Predicted protein OS=Populus trichocarp...    89   1e-16
B9GP84_POPTR (tr|B9GP84) Predicted protein OS=Populus trichocarp...    85   2e-15
A9PJM8_9ROSI (tr|A9PJM8) Putative uncharacterized protein OS=Pop...    85   3e-15
Q8LPD2_TOBAC (tr|Q8LPD2) Protein kinase Ck2 regulatory subunit 2...    73   1e-11
D7LLP6_ARALY (tr|D7LLP6) Putative uncharacterized protein OS=Ara...    72   2e-11
D7TTK4_VITVI (tr|D7TTK4) Whole genome shotgun sequence of line P...    64   4e-09
Q70Z23_TOBAC (tr|Q70Z23) Protein kinase 2 beta chain OS=Nicotian...    57   8e-07
B8LPQ3_PICSI (tr|B8LPQ3) Putative uncharacterized protein OS=Pic...    55   3e-06
D7LRN2_ARALY (tr|D7LRN2) Putative uncharacterized protein OS=Ara...    54   4e-06

>D7SM23_VITVI (tr|D7SM23) Whole genome shotgun sequence of line PN40024,
          scaffold_21.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00018326001 PE=4 SV=1
          Length = 288

 Score =  103 bits (258), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 57/60 (95%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNNKDKDRLSVPSTSAGKSQLDHRDPRSASLSKNKC 76
          ++RKRINDALDKHLEKSSPSTS+ L++KDK+RLSVPSTSAGKSQLDHRD R+ASL KNKC
Sbjct: 19 LDRKRINDALDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGKSQLDHRDTRAASLPKNKC 78


>A5BGR6_VITVI (tr|A5BGR6) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_022015 PE=4 SV=1
          Length = 282

 Score =  103 bits (257), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 57/60 (95%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNNKDKDRLSVPSTSAGKSQLDHRDPRSASLSKNKC 76
          ++RKRINDALDKHLEKSSPSTS+ L++KDK+RLSVPSTSAGKSQLDHRD R+ASL KNKC
Sbjct: 19 LDRKRINDALDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGKSQLDHRDTRAASLPKNKC 78


>B9SKF5_RICCO (tr|B9SKF5) Casein kinase II beta chain, putative OS=Ricinus
          communis GN=RCOM_0658550 PE=4 SV=1
          Length = 338

 Score = 96.3 bits (238), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/76 (69%), Positives = 58/76 (76%), Gaps = 6/76 (7%)

Query: 1  MYKDXXXXXXXXXXXEIERKRINDALDKHLEKSSPSTSRALNNKDKDRLSVPSTSAGKSQ 60
          MYKD           E++RKRINDALDKHLEK SPSTSR LN+KDK+RLSVPSTS GKSQ
Sbjct: 1  MYKDRGGGSSRS---EMDRKRINDALDKHLEKLSPSTSRTLNSKDKERLSVPSTSTGKSQ 57

Query: 61 LDHRDPRSASLSKNKC 76
           DH   RSAS+SKNKC
Sbjct: 58 FDH---RSASISKNKC 70


>B9MV44_POPTR (tr|B9MV44) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_826719 PE=4 SV=1
          Length = 300

 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/90 (63%), Positives = 60/90 (66%), Gaps = 14/90 (15%)

Query: 1  MYKDXXXXXXXXXXXEI-----ERKRINDALDKHLEKSSPSTSRALNN--KDKDRLSVPS 53
          MYKD           EI     +RKRINDALDKHLEKSSPSTSR LNN  KDK+RLSVPS
Sbjct: 1  MYKDRGGFGGGSSRSEIVGGQLDRKRINDALDKHLEKSSPSTSRGLNNSSKDKERLSVPS 60

Query: 54 TSAGKS-----QLDHR--DPRSASLSKNKC 76
          TS GKS      L+H   D RSASLSKNKC
Sbjct: 61 TSTGKSSQHQQHLEHHRADSRSASLSKNKC 90


>B9GP84_POPTR (tr|B9GP84) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_830334 PE=4 SV=1
          Length = 301

 Score = 85.1 bits (209), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 52/70 (74%), Gaps = 10/70 (14%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNN--KDKDRLSVPSTSAGKS--------QLDHRDP 66
          ++RKRINDALDKHLEKSSPSTSR LNN  KDK+RLSVPSTS GKS             D 
Sbjct: 22 LDRKRINDALDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADS 81

Query: 67 RSASLSKNKC 76
          RSASLSKNKC
Sbjct: 82 RSASLSKNKC 91


>A9PJM8_9ROSI (tr|A9PJM8) Putative uncharacterized protein OS=Populus
          trichocarpa x Populus deltoides PE=2 SV=1
          Length = 330

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 52/70 (74%), Gaps = 10/70 (14%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNN--KDKDRLSVPSTSAGKS--------QLDHRDP 66
          ++RKRINDALDKHLEKSSPSTSR LNN  KDK+RLSVPSTS GKS             D 
Sbjct: 22 LDRKRINDALDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADS 81

Query: 67 RSASLSKNKC 76
          RSASLSKNKC
Sbjct: 82 RSASLSKNKC 91


>Q8LPD2_TOBAC (tr|Q8LPD2) Protein kinase Ck2 regulatory subunit 2 OS=Nicotiana
          tabacum GN=ck2beta2 PE=2 SV=1
          Length = 280

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 8/62 (12%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNNKDKDRLSVPSTSAGKSQLDHRDPRSASLSKNKC 76
          ++RKRINDALDKHLEKSSPSTSRA  +K     +VPSTSAGKS   H D R+   +KNKC
Sbjct: 19 LDRKRINDALDKHLEKSSPSTSRAFKDK-----AVPSTSAGKSHQHHPDHRA---TKNKC 70

Query: 77 SD 78
          SD
Sbjct: 71 SD 72


>D7LLP6_ARALY (tr|D7LLP6) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_483599 PE=4 SV=1
          Length = 283

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 2/63 (3%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNNKDKDRLSVPSTSAGKSQLDHRDPRSASLSKNKC 76
          I+RKRINDALDKHL+KSSPSTSR   +KDKD  S PSTS  KSQL  R P   S + ++ 
Sbjct: 26 IDRKRINDALDKHLKKSSPSTSRVFTSKDKD--SFPSTSTAKSQLHSRSPDVESETDSEG 83

Query: 77 SDV 79
          SDV
Sbjct: 84 SDV 86


>D7TTK4_VITVI (tr|D7TTK4) Whole genome shotgun sequence of line PN40024,
          scaffold_12.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00013280001 PE=4 SV=1
          Length = 266

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNNKDKDRLSVPST 54
          I+RKRINDALDKHLE+SSPSTS+ LN KDKDR+S  ST
Sbjct: 19 IDRKRINDALDKHLERSSPSTSKGLNGKDKDRVSAQST 56


>Q70Z23_TOBAC (tr|Q70Z23) Protein kinase 2 beta chain OS=Nicotiana tabacum
          GN=ck2B1 PE=2 SV=1
          Length = 275

 Score = 56.6 bits (135), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 16/66 (24%)

Query: 17 IERKRINDALDKHLEKSSPSTSRALNNKDKDRLSVPST------SAGKSQLDHRDPRSAS 70
          ++RKRINDALDKHLEK SPSTSR+L +K     +VPST        GKS  DHR+     
Sbjct: 15 LDRKRINDALDKHLEKLSPSTSRSLKDK-----AVPSTSASAGGGGGKSHFDHRN----- 64

Query: 71 LSKNKC 76
           SKNKC
Sbjct: 65 TSKNKC 70


>B8LPQ3_PICSI (tr|B8LPQ3) Putative uncharacterized protein OS=Picea sitchensis
          PE=2 SV=1
          Length = 297

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 6/43 (13%)

Query: 18 ERKRINDALDK--HLEKSSPSTSRALNNKDKDRLSVPSTSAGK 58
          +RKRINDALDK  HLEKS PSTS+ LN     RLS+PSTSAG+
Sbjct: 28 DRKRINDALDKHLHLEKSPPSTSKGLNG----RLSIPSTSAGR 66


>D7LRN2_ARALY (tr|D7LRN2) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_486495 PE=4 SV=1
          Length = 278

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 6/65 (9%)

Query: 17 IERKRINDALDKHLEKSS--PSTSRALNNKDKDRLSVPSTSAGKSQLDHRDPRSASLSKN 74
          I+RKRINDAL+K LEKSS   +TSR   +KDKD  S  STS  KSQL    P   S + +
Sbjct: 22 IDRKRINDALNKKLEKSSTPTTTSRVFTSKDKDPFSFTSTSTAKSQL----PDVESETDS 77

Query: 75 KCSDV 79
          + SDV
Sbjct: 78 EGSDV 82