Jatropha Genome Database
- JcCA0138821.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0138821.10 + phase: 0
(73 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A5BHC0_VITVI (tr|A5BHC0) Putative uncharacterized protein OS=Vit... 71 3e-11
D7U5A3_VITVI (tr|D7U5A3) Whole genome shotgun sequence of line P... 71 5e-11
A5B432_VITVI (tr|A5B432) Putative uncharacterized protein OS=Vit... 65 2e-09
B9H151_POPTR (tr|B9H151) Predicted protein OS=Populus trichocarp... 61 5e-08
B9S6N8_RICCO (tr|B9S6N8) DNA binding protein, putative OS=Ricinu... 60 1e-07
B9STC8_RICCO (tr|B9STC8) DNA binding protein, putative OS=Ricinu... 58 4e-07
A5B1V8_VITVI (tr|A5B1V8) Putative uncharacterized protein OS=Vit... 57 5e-07
D7SNZ5_VITVI (tr|D7SNZ5) Whole genome shotgun sequence of line P... 57 5e-07
D6MK24_9ASPA (tr|D6MK24) Transcription factor (Fragment) OS=Lyco... 57 6e-07
B9MXF9_POPTR (tr|B9MXF9) Predicted protein OS=Populus trichocarp... 55 3e-06
>A5BHC0_VITVI (tr|A5BHC0) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_018451 PE=4 SV=1
Length = 378
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 44/57 (77%), Gaps = 6/57 (10%)
Query: 19 PPDPCVAPPTRSQP--SQRPESEVKD---ARKVLKADREKLRRDRLNEQFIELGNAL 70
PPDP V+ TRS P S+R E E KD ARKV KADREKLRRDRLNEQFIELGNAL
Sbjct: 66 PPDPRVSS-TRSHPDSSKRSEGEFKDFVTARKVQKADREKLRRDRLNEQFIELGNAL 121
>D7U5A3_VITVI (tr|D7U5A3) Whole genome shotgun sequence of line PN40024,
scaffold_38.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00024084001 PE=4 SV=1
Length = 329
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 44/57 (77%), Gaps = 6/57 (10%)
Query: 19 PPDPCVAPPTRSQP--SQRPESEVKD---ARKVLKADREKLRRDRLNEQFIELGNAL 70
PPDP V+ TRS P S+R E E KD ARKV KADREKLRRDRLNEQFIELGNAL
Sbjct: 17 PPDPRVSS-TRSHPDSSKRSEGEFKDFVTARKVQKADREKLRRDRLNEQFIELGNAL 72
>A5B432_VITVI (tr|A5B432) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_029413 PE=4 SV=1
Length = 1086
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Query: 19 PPDPCVAPPTRSQP--SQRPESEVKD---ARKVLKADREKLRRDRLNEQFIELGNAL 70
PPDP V+ TRS P S+R E E KD ARKV KADREKL+RDRLNEQFIEL NAL
Sbjct: 534 PPDPRVSS-TRSHPDSSKRSEGEFKDFVIARKVQKADREKLKRDRLNEQFIELRNAL 589
>B9H151_POPTR (tr|B9H151) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1076868 PE=4 SV=1
Length = 326
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 9 PFSDFPQQQLPPDPCVAPPTRSQPS-QRPESEVKD---ARKVLKADREKLRRDRLNEQFI 64
PF+DF PP P PPTR P+ + E+E+KD ARK+ KADREKLRRDRLNE F+
Sbjct: 3 PFTDFNPPPPPPVPRHVPPTRPNPNPKSSEAEIKDSVSARKIQKADREKLRRDRLNEHFV 62
Query: 65 ELGNAL 70
ELGN L
Sbjct: 63 ELGNTL 68
>B9S6N8_RICCO (tr|B9S6N8) DNA binding protein, putative OS=Ricinus communis
GN=RCOM_0870520 PE=4 SV=1
Length = 317
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 36/47 (76%), Gaps = 3/47 (6%)
Query: 27 PTRSQPSQRPESEVKD---ARKVLKADREKLRRDRLNEQFIELGNAL 70
P+ S+ R E+E KD A+KV KADREKLRRDRLNEQF+ELGN L
Sbjct: 22 PSSSESRNRLEAEAKDPIAAKKVQKADREKLRRDRLNEQFLELGNTL 68
>B9STC8_RICCO (tr|B9STC8) DNA binding protein, putative OS=Ricinus communis
GN=RCOM_0660720 PE=4 SV=1
Length = 316
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 33 SQRPESEVKDA---RKVLKADREKLRRDRLNEQFIELGNAL 70
SQ ESEVKD+ RK KADREKLRRDRLNE FIELG+AL
Sbjct: 21 SQGLESEVKDSVAVRKSEKADREKLRRDRLNEHFIELGDAL 61
>A5B1V8_VITVI (tr|A5B1V8) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_019798 PE=4 SV=1
Length = 332
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Query: 34 QRPESEVKD---ARKVLKADREKLRRDRLNEQFIELGNAL 70
QR E E KD ARKV KADREKLRRDRLNE F+ELGN L
Sbjct: 37 QRTEVEAKDSIAARKVQKADREKLRRDRLNEHFLELGNTL 76
>D7SNZ5_VITVI (tr|D7SNZ5) Whole genome shotgun sequence of line PN40024,
scaffold_23.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00018777001 PE=4 SV=1
Length = 326
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Query: 34 QRPESEVKD---ARKVLKADREKLRRDRLNEQFIELGNAL 70
QR E E KD ARKV KADREKLRRDRLNE F+ELGN L
Sbjct: 37 QRTEVEAKDSIAARKVQKADREKLRRDRLNEHFLELGNTL 76
>D6MK24_9ASPA (tr|D6MK24) Transcription factor (Fragment) OS=Lycoris longituba
PE=2 SV=1
Length = 211
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 33 SQRPESEVKDA---RKVLKADREKLRRDRLNEQFIELGNAL 70
SQR E +VKD RKV KADREKLRRDRLNEQF+ELG AL
Sbjct: 29 SQRAEHDVKDPIAPRKVQKADREKLRRDRLNEQFLELGKAL 69
>B9MXF9_POPTR (tr|B9MXF9) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_796703 PE=4 SV=1
Length = 292
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
Query: 31 QPSQRPESEVKD----ARKVLKADREKLRRDRLNEQFIELGNAL 70
+P QR E EVK+ A+KV KADREKLRRD LNEQF+ELG L
Sbjct: 44 EPRQRQEVEVKNPIAVAKKVQKADREKLRRDNLNEQFLELGTTL 87