Jatropha Genome Database

JcCA0138571.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0138571.20 - phase: 0 
         (376 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7LB12_ARALY (tr|D7LB12) Putative uncharacterized protein OS=Ara...    78   1e-12
D7MWH9_ARALY (tr|D7MWH9) Predicted protein OS=Arabidopsis lyrata...    78   2e-12
D7KYR2_ARALY (tr|D7KYR2) Predicted protein OS=Arabidopsis lyrata...    72   1e-10
B9SM33_RICCO (tr|B9SM33) Putative uncharacterized protein OS=Ric...    70   5e-10
Q9FF24_ARATH (tr|Q9FF24) Similarity to retroelement pol polyprot...    60   3e-07
Q9S9U9_ARATH (tr|Q9S9U9) AT4g07570 protein OS=Arabidopsis thalia...    57   3e-06
D7L492_ARALY (tr|D7L492) Putative uncharacterized protein OS=Ara...    55   9e-06

>D7LB12_ARALY (tr|D7LB12) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_342203 PE=4 SV=1
          Length = 518

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 45/260 (17%)

Query: 41  ASSDQQERYTKLSLRP------ILPNRFIDEAALAQVGLRDIVLDPLKRIGWGEFIDMKD 94
           A S QQ+    L+ RP      ++P R+ DEA L ++ L   V    +++G  +F++ + 
Sbjct: 29  AKSTQQD---SLNYRPYFAQIKVVPTRYTDEATLERLHLSQTVSTLFEKMGLSDFVNKRH 85

Query: 95  LVYAPLTLEFLSSYRAFIPLLPNSPPSR-------VNFRLLSQDFELTVNEISHIF---- 143
           L Y  LT +FL++           P  R       ++F + +++  +T +++++IF    
Sbjct: 86  LTYTELTKDFLATVEVL-----QEPDCRLTGKNGAIHFVVANENHIVTFDDLANIFGLQK 140

Query: 144 GFPTDNSQIQISSDFSARNTWKNLTGEVNYNPRYSKASKLKKPSLRYIHKFLSNSIFGRS 203
           GF    S++Q    +     W  + G   YN    KA++L+ P++RY H+ L+N+ F R 
Sbjct: 141 GFEMKYSKVQDPQQY-----WDAIGGTGRYNSGKVKAAQLRHPAVRYAHRVLANTFFARQ 195

Query: 204 ESDGVLSLNELYFLWAIENGVLLNVGYWLCQKFGKVAG---------ADKGAIMVGCFVT 254
            ++ V +  E++ L+    G       W     G V G         A + +  +   V 
Sbjct: 196 FTNNVRT-EEMHLLYTGLEGTT-----WRDVHMGSVLGHHLASYKQWAKEASTKLKVNVK 249

Query: 255 RIARYLQVWNPARPIYDSIG 274
           R    + +     PI D +G
Sbjct: 250 RKKPTISIGGIITPILDFVG 269


>D7MWH9_ARALY (tr|D7MWH9) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
           GN=ARALYDRAFT_655679 PE=4 SV=1
          Length = 550

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 45/260 (17%)

Query: 41  ASSDQQERYTKLSLRP------ILPNRFIDEAALAQVGLRDIVLDPLKRIGWGEFIDMKD 94
           A S QQ+    L+ RP      ++P R+ DEA L ++ L   V    +++G  +F++ + 
Sbjct: 29  AKSTQQD---SLNYRPYFAQIKVVPTRYTDEATLERLHLSQTVSTLFEKMGLSDFVNKRH 85

Query: 95  LVYAPLTLEFLSSYRAFIPLLPNSPPSR-------VNFRLLSQDFELTVNEISHIF---- 143
           L Y  LT +FL++           P  R       ++F + +++  +T +++++IF    
Sbjct: 86  LTYTELTKDFLATVEVL-----QEPDCRLTGKNGAIHFVVANENHIVTFDDLANIFGLQK 140

Query: 144 GFPTDNSQIQISSDFSARNTWKNLTGEVNYNPRYSKASKLKKPSLRYIHKFLSNSIFGRS 203
           GF    S++Q    +     W  + G   YN    KA++L+ P++RY H+ L+N+ F R 
Sbjct: 141 GFEMKYSKVQDPQQY-----WDAIGGTGRYNSGKVKAAQLRHPAVRYAHRVLANTFFARQ 195

Query: 204 ESDGVLSLNELYFLWAIENGVLLNVGYWLCQKFGKVAG---------ADKGAIMVGCFVT 254
            ++ V +  E++ L+    G       W     G V G         A + +  +   V 
Sbjct: 196 FTNNVRT-EEMHLLYTGLEGTT-----WRDVHMGSVLGHHLASYKQWAKEASTKLKVNVK 249

Query: 255 RIARYLQVWNPARPIYDSIG 274
           R    + +     PI D +G
Sbjct: 250 RKKPTISIGGIITPILDFVG 269


>D7KYR2_ARALY (tr|D7KYR2) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
           GN=ARALYDRAFT_675635 PE=4 SV=1
          Length = 264

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 7/175 (4%)

Query: 57  ILPNRFIDEAALAQVGLRDIVLDPLKRIGWGEFIDMKDLVYAPLTLEFLSSYRAFIPLLP 116
           + P RF+D   L Q+GL + V D L+RIG     DM    +   T +FLS+ +       
Sbjct: 42  VHPTRFVDRFFLRQMGLAEGVDDLLQRIGMSCLKDMYYPTFEEETRDFLSTVKVEYEKPR 101

Query: 117 NSPPSR--VNFRLLSQDFELTVNEISHIFGFPTDNSQIQISSD-FSARNTWKNLTGEVNY 173
           +   S+  + F++ ++ + LT+ +I  ++GF    +   +S D F   N   N     NY
Sbjct: 102 DKVASQGLMTFKIRNKGYGLTIFDICEVYGFSKGEA---VSFDTFHGANYLWNRIANGNY 158

Query: 174 NPRYSKASKLKKPSLRYIHKFLSNSIFGRSESDGVLSLNELYFLWAIENGVLLNV 228
               +K + ++ P +RY+ K L+N+ F R ++ G ++L EL  L+     +L+++
Sbjct: 159 KTHGAKMTGIRNPVIRYVCKLLANTFFARKDA-GAVTLKELCLLYQGLKHLLIDM 212


>B9SM33_RICCO (tr|B9SM33) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0834210 PE=4 SV=1
          Length = 170

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 77/138 (55%), Gaps = 3/138 (2%)

Query: 157 DFSARNTWKNLTGEVNYNPRYSKASKLKKPSLRYIHKFLSNSIFGRSESDGVLSLNELYF 216
           +F++ N W ++T      P+ +K++ +  P+LR+I+++ + +I  R +S G++   E++F
Sbjct: 2   EFNSNNAWLSVTMGT---PKVAKSTSIIDPNLRHIYRWKAYTICARGDSFGIVQKTEVFF 58

Query: 217 LWAIENGVLLNVGYWLCQKFGKVAGADKGAIMVGCFVTRIARYLQVWNPARPIYDSIGGG 276
           +  ++  + + +G +L      +       I++   VT+IA YL+V++P    +  +   
Sbjct: 59  MHCMQKNIKVALGRFLASHLQSITTQPNENILIRSLVTKIATYLKVFDPKDITFKLLPQS 118

Query: 277 RSTRLDLDVMIHMKLIEK 294
            +  L+L  ++ M+LI+K
Sbjct: 119 DAEVLNLHTLVKMELIKK 136


>Q9FF24_ARATH (tr|Q9FF24) Similarity to retroelement pol polyprotein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 472

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 8/170 (4%)

Query: 52  LSLRPILPNRFIDEAALAQVGLRDIVLDPLKRIGWGEFIDMKDLVYAPLTLEFLSS--YR 109
           +S  P  P RF +   L ++GL + + +   ++G G F  M    ++  T++F S+  Y 
Sbjct: 40  ISPLPSFPTRFANREILEKMGLLETIDEFFTKMGLGAFTSMDHPTFSEPTVDFFSTMEYT 99

Query: 110 AFIPLLPNSPPSRVNFRLLSQDFELTVNEISHIFGFPTDNSQIQISSDFSARNTWKNL-T 168
              P +P +    +NF++ ++ F +++ ++   +GF  + S++           W  L +
Sbjct: 100 FTNPKIPLAKEGIINFKVKTKAFSISIPDLCEAYGF-ENKSEMSFPKFKGIHFFWGELAS 158

Query: 169 GEVNYNPRYSKASKLKKPSLRYIHKFLSNSIFGRSESDGVLSLNELYFLW 218
           G+ + N   +    ++ P +RY  K L++++FGR E+    +++E+ FL+
Sbjct: 159 GKFSCN---ASIKSVRHPVIRYALKLLAHALFGRGETSST-TVSEMCFLF 204


>Q9S9U9_ARATH (tr|Q9S9U9) AT4g07570 protein OS=Arabidopsis thaliana GN=T14A16.4
           PE=4 SV=1
          Length = 443

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 77/163 (47%), Gaps = 6/163 (3%)

Query: 60  NRFIDEAALAQVGLRDIVLDPLKRIGWGEFIDMKDLVYAPLTLEFLSSYRAFIPLLPNSP 119
            R+  +  + ++G+   V   ++      FI  +   Y   + + L++ +    +  +  
Sbjct: 35  TRYPHKETMQELGICGHVEYLMELANLATFISCQCGGYKEESCQLLATLKVHFCVDDSEK 94

Query: 120 PSR-----VNFRLLSQDFELTVNEISHIFGFPTDNSQIQISSDFSARNTWKNLTGEVNYN 174
             R     + F+++  ++ L +  I  IFGFP+     Q       ++ WK + G   + 
Sbjct: 95  EERGGLGYITFKVMGVEYTLNICNIDTIFGFPSGEGIRQDYDQQELKSLWKTIAGPKPFL 154

Query: 175 PRYSKASKLKKPSLRYIHKFLSNSIFGRSESDGVLSLNELYFL 217
           P  SK+S ++ P +RY+H+ ++N++F + ++ G +S  EL  +
Sbjct: 155 PTKSKSSSIRNPVIRYLHQCIANTLFPK-KATGFVSEEELCMI 196


>D7L492_ARALY (tr|D7L492) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_898967 PE=4 SV=1
          Length = 488

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 47  ERYTKLSLRPILPNRFIDEAALAQVGLRDIVLDPLKRIGWGEFIDMKDLVYAPLTLEFLS 106
           +R TKL   P  P R+ D   L +  L + V D    +G G+F       Y   T EFL+
Sbjct: 101 QRLTKLKSIPFAPTRYPDHGFLQEARLLEDVQDIFTNLGLGQFFTRAYPTYVNPTREFLA 160

Query: 107 SYRAFIPLLPNSPPSRVN-------FRLLSQDFELTVNEISHIFGFPTDNSQIQISSDFS 159
           S +       ++  +R N       FR+     ++T  E+  I+ F   + +++ S    
Sbjct: 161 SLKV---QFYDAREARANNDLGYFEFRVGGTLHKMTFKELGDIYNFQAGD-ELEFSGCSG 216

Query: 160 ARNTWKNLTGEVNYNPRYSKASKLKKPSLRYIHKFLSNSIFGRSESDGVLSLNELYFLWA 219
              ++    G        +KAS +  P++RY H  LS+++F R E+  VL   EL  L A
Sbjct: 217 EYLSFWGQIGTGILKKGATKASTIAHPAIRYAHIVLSHTLFARRETGNVLK-EELICLLA 275