Jatropha Genome Database
- JcCA0134311.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0134311.10 + phase: 2 /partial
(82 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RMK2_RICCO (tr|B9RMK2) Putative uncharacterized protein OS=Ric... 120 6e-26
B9HTC6_POPTR (tr|B9HTC6) Predicted protein OS=Populus trichocarp... 101 3e-20
D7TAL9_VITVI (tr|D7TAL9) Whole genome shotgun sequence of line P... 92 3e-17
D7UBH1_VITVI (tr|D7UBH1) Whole genome shotgun sequence of line P... 89 2e-16
D5ACA5_PICSI (tr|D5ACA5) Putative uncharacterized protein OS=Pic... 74 6e-12
D7LQX6_ARALY (tr|D7LQX6) F-box family protein OS=Arabidopsis lyr... 73 1e-11
B9GIZ5_POPTR (tr|B9GIZ5) Predicted protein OS=Populus trichocarp... 69 2e-10
A5C5I1_VITVI (tr|A5C5I1) Putative uncharacterized protein OS=Vit... 66 1e-09
B9HW34_POPTR (tr|B9HW34) Predicted protein OS=Populus trichocarp... 61 5e-08
C5YAX1_SORBI (tr|C5YAX1) Putative uncharacterized protein Sb06g0... 54 4e-06
>B9RMK2_RICCO (tr|B9RMK2) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1081340 PE=4 SV=1
Length = 483
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
Query: 1 AEGCQQKEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWKQ-VNCQEEE 59
AEGCQQKEHS+Q CR CTLCIARC QCG CINDSEYEETFCLELLCSDC+KQ + CQE++
Sbjct: 401 AEGCQQKEHSSQACRGCTLCIARCSQCGCCINDSEYEETFCLELLCSDCYKQLLKCQEKQ 460
Query: 60 DGKISPPKAPAVCESSCSFRLYG 82
KI+PPK+ A SSCS RL+G
Sbjct: 461 VNKITPPKSLARHVSSCSGRLHG 483
>B9HTC6_POPTR (tr|B9HTC6) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1089730 PE=4 SV=1
Length = 449
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 49/53 (92%)
Query: 1 AEGCQQKEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWKQV 53
EGCQ KEH +Q CRAC+LCIARCVQCGRCINDSEYEETFCLELLCSDCWKQ+
Sbjct: 394 VEGCQGKEHPSQACRACSLCIARCVQCGRCINDSEYEETFCLELLCSDCWKQL 446
>D7TAL9_VITVI (tr|D7TAL9) Whole genome shotgun sequence of line PN40024,
scaffold_10.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00010321001 PE=4 SV=1
Length = 400
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 1 AEGCQQKEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWKQ 52
A+GCQ KE++ Q CRACTLCIARCVQCGRCIND EYEETFCLE LCSDC+KQ
Sbjct: 335 ADGCQVKENAAQVCRACTLCIARCVQCGRCINDGEYEETFCLEWLCSDCFKQ 386
>D7UBH1_VITVI (tr|D7UBH1) Whole genome shotgun sequence of line PN40024,
scaffold_171.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00001846001 PE=4 SV=1
Length = 489
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 1 AEGCQQKEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWKQ-VNCQEEE 59
+E CQ K S Q CRACTLCIARC CGRCIND +YEETFCL+LLC DC+KQ +NCQE +
Sbjct: 396 SESCQGKHQSAQLCRACTLCIARCFHCGRCINDCDYEETFCLDLLCLDCFKQLLNCQERQ 455
Query: 60 DGKISPPKAPAVC--ESSCSFRL 80
+ +P + E+S F L
Sbjct: 456 EEMGAPSSKHTIFHQETSIPFLL 478
>D5ACA5_PICSI (tr|D5ACA5) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 189
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 10/81 (12%)
Query: 2 EGCQQKE-HSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWKQV------- 53
E CQ+K+ H Q CR C CIARC +CGRCI+D+E+EETFCL+LLCS CW Q+
Sbjct: 90 ERCQKKKGHKLQQCRGCIFCIARCEECGRCIDDNEFEETFCLDLLCSACWLQLPKCLECN 149
Query: 54 --NCQEEEDGKISPPKAPAVC 72
C D I P VC
Sbjct: 150 RPGCGRHADHFIRRPDTSFVC 170
>D7LQX6_ARALY (tr|D7LQX6) F-box family protein OS=Arabidopsis lyrata subsp.
lyrata GN=ARALYDRAFT_484362 PE=4 SV=1
Length = 451
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 1 AEGCQQKEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWK 51
AE C+ K+ ++ CRAC+LCI RC CGRCINDSEYEETFCLE LC+ C K
Sbjct: 394 AEDCKGKKKGSEECRACSLCIQRCYHCGRCINDSEYEETFCLEFLCAVCSK 444
>B9GIZ5_POPTR (tr|B9GIZ5) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_549629 PE=4 SV=1
Length = 422
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 1 AEGCQQKEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWKQV-NCQEE 58
+E CQ K+ + Q CRACT+CIARC+ CG CI +YEETFCL+ LC DC K + NC E+
Sbjct: 337 SESCQGKDQANQLCRACTVCIARCIHCGCCIKGCDYEETFCLDFLCLDCLKHLFNCPEK 395
>A5C5I1_VITVI (tr|A5C5I1) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_011588 PE=4 SV=1
Length = 1150
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 37/51 (72%)
Query: 1 AEGCQQKEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWK 51
+E CQ K S Q RACTLCIARC CG CIND +YEETFCL+LLC C+
Sbjct: 594 SESCQGKHQSAQLWRACTLCIARCFHCGCCINDCDYEETFCLKLLCLVCFN 644
>B9HW34_POPTR (tr|B9HW34) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_882328 PE=4 SV=1
Length = 306
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 7 KEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCW---------KQVNCQE 57
+EHS CR C CI+RC +CG+C++D E EET C +LC+DCW Q C++
Sbjct: 217 REHSFTHCRGCYFCISRCEECGQCVDDEELEETLCFGILCTDCWLLLPKCCFCNQAYCKQ 276
Query: 58 EEDGKISPPKAPAVCESSCSFRL--YG 82
E+ + S P + C+ +L YG
Sbjct: 277 HENQRCSLPDSTGFLCDLCNEKLETYG 303
>C5YAX1_SORBI (tr|C5YAX1) Putative uncharacterized protein Sb06g020660 OS=Sorghum
bicolor GN=Sb06g020660 PE=4 SV=1
Length = 457
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 7 KEHSTQPCRACTLCIARCVQCGRCINDSEYEETFCLELLCSDCWK 51
K CR C +CI+RC++CGRCI DSE++ETF LE LC DC K
Sbjct: 405 KTSGASTCRGCVVCISRCLRCGRCI-DSEFQETFLLENLCRDCVK 448