Jatropha Genome Database

JcCA0122021.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0122021.20 + phase: 0 /partial
         (96 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9I6F2_POPTR (tr|B9I6F2) Predicted protein OS=Populus trichocarp...    78   3e-13
B9SDA4_RICCO (tr|B9SDA4) Brg-1 associated factor, putative OS=Ri...    68   4e-10
A5BKY5_VITVI (tr|A5BKY5) Putative uncharacterized protein OS=Vit...    67   8e-10
Q6V9I4_SOLCH (tr|Q6V9I4) SWIb domain-containing protein (Fragmen...    60   6e-08
Q9SS61_ARATH (tr|Q9SS61) At3g03590 OS=Arabidopsis thaliana GN=At...    59   2e-07
Q8LA28_ARATH (tr|Q8LA28) Putative uncharacterized protein OS=Ara...    59   2e-07
A5AX80_VITVI (tr|A5AX80) Putative uncharacterized protein OS=Vit...    58   4e-07
D7L175_ARALY (tr|D7L175) Putative uncharacterized protein OS=Ara...    57   6e-07
B9HS93_POPTR (tr|B9HS93) Predicted protein OS=Populus trichocarp...    56   2e-06
Q93W30_ARATH (tr|Q93W30) Expressed protein OS=Arabidopsis thalia...    55   2e-06
D7MF30_ARALY (tr|D7MF30) Putative uncharacterized protein OS=Ara...    55   2e-06
D7LHX8_ARALY (tr|D7LHX8) SWIB complex BAF60b domain-containing p...    54   4e-06
A9PEF0_POPTR (tr|A9PEF0) Predicted protein OS=Populus trichocarp...    54   5e-06
Q94F02_ARATH (tr|Q94F02) Putative uncharacterized protein F10M10...    54   7e-06
Q9SYZ4_ARATH (tr|Q9SYZ4) Putative uncharacterized protein AT4g34...    54   7e-06
Q8LDV9_ARATH (tr|Q8LDV9) Putative uncharacterized protein OS=Ara...    54   7e-06

>B9I6F2_POPTR (tr|B9I6F2) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_730132 PE=4 SV=1
          Length = 126

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 49/94 (52%), Gaps = 10/94 (10%)

Query: 1  MSFATSRVFKGCRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPLQPAGILKVTP 60
          MSFA SRVFK CRALL                                P  P GILK  P
Sbjct: 1  MSFAASRVFKACRALLAPAKPATASKTTPKPKAKATSTT---------PGTPRGILKPNP 51

Query: 61 VSPALRDFLG-VPESSRTDAVKKIWIHIKQNNLQ 93
          VSP L DFLG VPESSR +AVKKIW HIK +NLQ
Sbjct: 52 VSPVLGDFLGGVPESSRAEAVKKIWAHIKLHNLQ 85


>B9SDA4_RICCO (tr|B9SDA4) Brg-1 associated factor, putative OS=Ricinus communis
          GN=RCOM_1515600 PE=4 SV=1
          Length = 134

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 39/48 (81%), Gaps = 1/48 (2%)

Query: 47 EKPLQPAGILKVTPVSPALRDFLG-VPESSRTDAVKKIWIHIKQNNLQ 93
          +KP++  GILK  PVSPAL +FLG VPE+SRTD VKKIW HIK +NLQ
Sbjct: 46 DKPVRATGILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQ 93


>A5BKY5_VITVI (tr|A5BKY5) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_015104 PE=4 SV=1
          Length = 128

 Score = 66.6 bits (161), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 35/45 (77%)

Query: 49 PLQPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
          P +  GI K  PVSPALR FLGVPE+SR +AVKKIW HIK NNLQ
Sbjct: 43 PPRSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQ 87


>Q6V9I4_SOLCH (tr|Q6V9I4) SWIb domain-containing protein (Fragment) OS=Solanum
           chacoense PE=2 SV=1
          Length = 148

 Score = 60.5 bits (145), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 32/40 (80%)

Query: 54  GILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           GILK  P+SPAL+ F+G  E SRTDAVKKIW +IK NNLQ
Sbjct: 68  GILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQ 107


>Q9SS61_ARATH (tr|Q9SS61) At3g03590 OS=Arabidopsis thaliana
           GN=At3g03590/T12J13_13 PE=2 SV=1
          Length = 143

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 31/40 (77%)

Query: 54  GILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           GI KVTPVSP L  FLG  E+SRTDA+K IW +IK ++LQ
Sbjct: 63  GIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQ 102


>Q8LA28_ARATH (tr|Q8LA28) Putative uncharacterized protein OS=Arabidopsis
           thaliana PE=2 SV=1
          Length = 143

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 31/40 (77%)

Query: 54  GILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           GI KVTPVSP L  FLG  E+SRTDA+K IW +IK ++LQ
Sbjct: 63  GIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQ 102


>A5AX80_VITVI (tr|A5AX80) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_011142 PE=4 SV=1
          Length = 145

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 34/43 (79%)

Query: 51  QPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           +P GI+K   +SP ++DFLGVPE  RT A+K+IW +IKQ+NLQ
Sbjct: 64  EPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQ 106


>D7L175_ARALY (tr|D7L175) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_477604 PE=4 SV=1
          Length = 145

 Score = 57.0 bits (136), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 31/40 (77%)

Query: 54  GILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           G+ KVTPVSP L  FLG  E++RTDA+K IW +IK ++LQ
Sbjct: 65  GLFKVTPVSPVLAQFLGTGETTRTDAIKGIWTYIKSHDLQ 104


>B9HS93_POPTR (tr|B9HS93) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_722365 PE=4 SV=1
          Length = 141

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 31/42 (73%)

Query: 52  PAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           P GI+K   VSP + DF+G PE SRT A+K IW HIK++NLQ
Sbjct: 61  PRGIMKPRRVSPEMADFIGAPEVSRTQALKLIWAHIKEHNLQ 102


>Q93W30_ARATH (tr|Q93W30) Expressed protein OS=Arabidopsis thaliana
          GN=At2g35605/T20F21.29 PE=2 SV=1
          Length = 109

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 31/43 (72%)

Query: 51 QPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
          Q  GILKV PVS  L +F+G  E SRT AVKKIW +IK NNLQ
Sbjct: 26 QGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQ 68


>D7MF30_ARALY (tr|D7MF30) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_491238 PE=4 SV=1
          Length = 144

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 35/46 (76%)

Query: 48  KPLQPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           K  +P GI+K  PVSP ++D +GVPE  RT A+K+IW +IK+++LQ
Sbjct: 61  KTREPRGIMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106


>D7LHX8_ARALY (tr|D7LHX8) SWIB complex BAF60b domain-containing protein
          OS=Arabidopsis lyrata subsp. lyrata
          GN=ARALYDRAFT_482518 PE=4 SV=1
          Length = 112

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 30/43 (69%)

Query: 51 QPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
          Q  GILKV PVS  L  F+G  E SRT AVKKIW +IK NNLQ
Sbjct: 29 QGTGILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQ 71


>A9PEF0_POPTR (tr|A9PEF0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_813615 PE=2 SV=1
          Length = 140

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 30/42 (71%)

Query: 52  PAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           P+GI+K   VSP + DF+G PE SRT  +K IW HIK+ NLQ
Sbjct: 60  PSGIMKPKRVSPEMADFVGAPEVSRTQVLKLIWAHIKERNLQ 101


>Q94F02_ARATH (tr|Q94F02) Putative uncharacterized protein F10M10.60
           OS=Arabidopsis thaliana GN=F10M10.60 PE=2 SV=1
          Length = 144

 Score = 53.5 bits (127), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 34/43 (79%)

Query: 51  QPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           +P GI+K  PVS A++D +GVPE  RT A+K+IW +IK+++LQ
Sbjct: 64  EPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106


>Q9SYZ4_ARATH (tr|Q9SYZ4) Putative uncharacterized protein AT4g34290
           OS=Arabidopsis thaliana GN=AT4g34290 PE=2 SV=1
          Length = 144

 Score = 53.5 bits (127), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 34/43 (79%)

Query: 51  QPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           +P GI+K  PVS A++D +GVPE  RT A+K+IW +IK+++LQ
Sbjct: 64  EPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106


>Q8LDV9_ARATH (tr|Q8LDV9) Putative uncharacterized protein OS=Arabidopsis
           thaliana PE=2 SV=1
          Length = 144

 Score = 53.5 bits (127), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 34/43 (79%)

Query: 51  QPAGILKVTPVSPALRDFLGVPESSRTDAVKKIWIHIKQNNLQ 93
           +P GI+K  PVS A++D +GVPE  RT A+K+IW +IK+++LQ
Sbjct: 64  EPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106