Jatropha Genome Database

JcCA0115371.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0115371.10 + phase: 1 /TE
         (279 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A2YY55_ORYSI (tr|A2YY55) Putative uncharacterized protein OS=Ory...    69   4e-10
B9FYK3_ORYSJ (tr|B9FYK3) Putative uncharacterized protein OS=Ory...    56   4e-06

>A2YY55_ORYSI (tr|A2YY55) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_30282 PE=4 SV=1
          Length = 632

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 56/200 (28%)

Query: 89  DLRPISLSNVIEQVTSKILTSHMLHSMSNVI--------LGRFIIKNAMIAFELMHFLKR 140
           DLRPISL +++ ++ SK++ + +   +  +I         GR I  N ++A+EL HFL+ 
Sbjct: 64  DLRPISLCSIVYKIASKVVANRLKRILPEIISLNQSAFVPGRMITDNVLLAYELTHFLQN 123

Query: 141 KTQGNNRFSAIKTVSPKLIIE*SDRF-WKLHY*S*VLPMVIEVGFCL*SGGVTIFESYVI 199
           K +G+++F+A+K    K      DR  W+      +  M+ ++GFC     + I   +V 
Sbjct: 124 KRRGSDKFAALKLDMSKAY----DRVEWEF-----LRRMMGKLGFC--QEWINIVMGFVS 172

Query: 200 EVGCCL*SDGVAVFESYVIKVGFCHRSYHQDYGNGNHCYLLCFSCQ*IV*SIYSWQGLRQ 259
            V             SY IKV            NG+           +   I   +GLRQ
Sbjct: 173 TV-------------SYRIKV------------NGD-----------LTEQIIPQRGLRQ 196

Query: 260 GDPMSSYLFLVMAEGLSALL 279
           GDP+S YLFL+ AE  S LL
Sbjct: 197 GDPLSPYLFLLCAEAFSCLL 216


>B9FYK3_ORYSJ (tr|B9FYK3) Putative uncharacterized protein OS=Oryza sativa subsp.
           japonica GN=OsJ_28290 PE=4 SV=1
          Length = 615

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 8/72 (11%)

Query: 89  DLRPISLSNVIEQVTSKILTSHMLHSMSNVI--------LGRFIIKNAMIAFELMHFLKR 140
           DLRPISL +V+ ++ SK++ + +   +  +I         GR I+ N ++A+EL HFL+ 
Sbjct: 41  DLRPISLCSVVYKIASKVVANRLKRILPEIISLNQSAFVPGRMIMDNVLLAYELTHFLQN 100

Query: 141 KTQGNNRFSAIK 152
           K +G+ +F+A+K
Sbjct: 101 KRRGSGKFAALK 112